FFCP PHASE1:Hg19::chr11:98891735..98891753,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:98891735..98891753,+ to FFCP PHASE1:Hg19::chr11:98891735..98891753,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53942 | |EntrezGene=53942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2175 | |HGNC=2175 | ||
|TSSclassifier=strong | |||
|UniProt=O94779,E9PKE8,Q49AF3 | |UniProt=O94779,E9PKE8,Q49AF3 | ||
|association_with_transcript=29bp_to_ENST00000528727,NM_001243270,NM_001243271,NM_014361_5end | |||
|cluster_id=chr11:98891735..98891753,+ | |||
|coexpression_cluster_id=C3215 | |||
|description=CAGE_peak_1_at_CNTN5_5end | |||
|id=chr11:98891735..98891753,+ | |||
|ontology_enrichment_celltype=CL:0000077!7.76e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.33e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.29e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.88e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-39!57;UBERON:0005068!2.97e-39!57;UBERON:0006241!2.97e-39!57;UBERON:0007135!2.97e-39!57;UBERON:0000073!5.16e-39!94;UBERON:0001016!5.16e-39!94;UBERON:0005743!2.70e-38!86;UBERON:0002616!3.80e-37!59;UBERON:0001017!3.24e-36!82;UBERON:0000955!1.28e-35!69;UBERON:0006238!1.28e-35!69;UBERON:0003075!3.39e-34!86;UBERON:0007284!3.39e-34!86;UBERON:0002346!4.37e-33!90;UBERON:0002780!4.65e-32!41;UBERON:0001890!4.65e-32!41;UBERON:0006240!4.65e-32!41;UBERON:0003080!5.14e-31!42;UBERON:0001869!1.42e-28!32;UBERON:0001893!1.78e-28!34;UBERON:0007023!7.25e-28!115;UBERON:0002619!8.62e-28!22;UBERON:0002020!1.01e-27!34;UBERON:0003528!1.01e-27!34;UBERON:0003056!2.29e-27!61;UBERON:0002791!3.27e-27!33;UBERON:0000153!2.56e-26!129;UBERON:0007811!2.56e-26!129;UBERON:0001950!1.84e-25!20;UBERON:0000033!1.89e-25!123;UBERON:0000956!1.27e-23!25;UBERON:0000203!1.27e-23!25;UBERON:0004121!3.37e-22!169;UBERON:0000924!6.09e-22!173;UBERON:0006601!6.09e-22!173;UBERON:0000481!2.26e-10!347;UBERON:0000483!1.76e-09!309;UBERON:0000025!1.91e-09!194;UBERON:0003076!2.63e-09!15;UBERON:0003057!2.63e-09!15;UBERON:0000119!3.49e-09!312;UBERON:0000477!4.86e-09!286;UBERON:0000200!5.01e-09!6;UBERON:0001871!9.31e-09!7;UBERON:0000064!2.09e-08!219;UBERON:0004111!2.20e-08!241;UBERON:0000475!2.28e-08!365;UBERON:0004733!3.46e-08!12;UBERON:0002028!3.46e-08!12;UBERON:0007277!3.46e-08!12;UBERON:0002021!4.20e-08!5;UBERON:0001872!6.68e-08!5;UBERON:0000349!6.77e-08!5;UBERON:0004732!2.20e-07!13;UBERON:0002420!9.44e-07!9;UBERON:0007245!9.44e-07!9;UBERON:0010009!9.44e-07!9;UBERON:0010011!9.44e-07!9;UBERON:0000454!9.44e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.24e-60;22!UBERON:0001950;2.87e-55;20!UBERON:0000956;1.05e-52;25!UBERON:0000203;1.05e-52;25!UBERON:0001869;2.67e-43;32!UBERON:0001893;2.83e-39;34!UBERON:0002791;4.08e-39;32!UBERON:0003528;2.59e-36;34!UBERON:0002020;2.59e-36;34!UBERON:0002780;6.75e-36;41!UBERON:0001890;6.75e-36;41!UBERON:0000073;2.95e-24;53!UBERON:0002616;2.95e-24;53!UBERON:0000200;5.27e-18;6!UBERON:0001017;1.34e-16;75!UBERON:0002021;5.21e-16;5!UBERON:0000955;9.42e-16;68!UBERON:0001871;1.08e-15;6!UBERON:0000349;1.52e-15;5!UBERON:0001872;2.23e-15;5!UBERON:0001016;3.82e-14;83!UBERON:0001870;2.35e-10;3!UBERON:0011216;6.50e-09;132!UBERON:0001876;7.61e-08;2!UBERON:0001894;2.65e-07;7!UBERON:0002702;2.99e-07;2!UBERON:0000007;3.84e-07;2!UBERON:0002771;4.69e-07;2!UBERON:0007023;5.41e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.22e-61,22;UBERON:0001950,1.25e-55,20;UBERON:0000956,3.89e-53,25;UBERON:0000203,3.89e-53,25;UBERON:0002780,1.83e-51,41;UBERON:0001890,1.83e-51,41;UBERON:0003080,1.83e-51,41;UBERON:0006240,1.83e-51,41;UBERON:0001869,7.32e-49,32;UBERON:0001893,1.09e-45,34;UBERON:0002791,1.48e-44,32;UBERON:0001049,1.08e-41,56;UBERON:0005068,1.08e-41,56;UBERON:0006241,1.08e-41,56;UBERON:0007135,1.08e-41,56;UBERON:0003528,1.21e-41,34;UBERON:0002020,1.21e-41,34;UBERON:0000073,2.43e-41,53;UBERON:0002616,2.43e-41,53;UBERON:0003056,1.05e-37,61;UBERON:0000955,1.24e-37,68;UBERON:0006238,1.24e-37,68;UBERON:0001017,7.71e-35,81;UBERON:0001016,1.00e-34,89;UBERON:0003075,3.02e-30,82;UBERON:0007284,3.02e-30,82;UBERON:0002346,1.84e-28,86;UBERON:0010371,3.94e-22,104;UBERON:0010314,1.00e-19,132;UBERON:0004121,1.26e-18,171;UBERON:0000924,1.26e-18,171;UBERON:0006601,1.26e-18,171;UBERON:0007023,2.11e-18,114;UBERON:0000200,3.61e-18,6;UBERON:0011216,7.55e-17,223;UBERON:0002021,4.07e-16,5;UBERON:0001872,1.14e-15,5;UBERON:0000349,1.17e-15,5;UBERON:0001871,1.20e-15,6;UBERON:0001870,2.24e-10,3;UBERON:0000025,1.72e-08,192;UBERON:0001876,7.88e-08,2;UBERON:0002702,2.68e-07,2;UBERON:0001894,2.79e-07,7;UBERON:0006222,2.79e-07,7;UBERON:0004111,3.28e-07,240;UBERON:0000007,3.44e-07,2;UBERON:0002771,5.15e-07,2;UBERON:0001954,8.65e-07,2;UBERON:0003022,8.65e-07,2;UBERON:0002421,8.65e-07,2;UBERON:0002600,8.65e-07,2 | |||
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|short_description=p1@CNTN5 | |||
}} | }} |
Latest revision as of 06:43, 25 September 2015
Short description: | p1@CNTN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNTN5_5end |
Coexpression cluster: | C3215_parotid_mesothelioma_occipital_astrocytoma_amygdala_pituitary_frontal |
Association with transcript: | 29bp_to_ENST00000528727, NM_001243270, NM_001243271, NM_014361_5end |
EntrezGene: | CNTN5 |
HGNC: | 2175 |
UniProt: | O94779E9PKE8Q49AF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.29e-07 | 19 |