FFCP PHASE1:Hg19::chr17:46507537..46507555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8631 | |EntrezGene=8631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15605 | |HGNC=15605 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WV1 | |UniProt=Q86WV1 | ||
|association_with_transcript=38bp_to_ENST00000336915,NM_001075099,NM_003726,uc002ini.1,uc002inj.1,uc010dbd.1,uc010dbe.1_5end | |association_with_transcript=38bp_to_ENST00000336915,NM_001075099,NM_003726,uc002ini.1,uc002inj.1,uc010dbd.1,uc010dbe.1_5end | ||
|cluster_id=chr17:46507537..46507555,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_SKAP1_5end | |description=CAGE_peak_2_at_SKAP1_5end | ||
|id=chr17:46507537..46507555,- | |id=chr17:46507537..46507555,- | ||
|ontology_enrichment_celltype=CL:0000542!9.80e-34!53;CL:0000051!9.80e-34!53;CL:0000838!6.66e-33!52;CL:0000738!4.78e-26!140;CL:0002031!4.39e-21!124;CL:0002087!2.41e-20!119;CL:0000084!4.04e-20!25;CL:0000827!4.04e-20!25;CL:0000037!5.06e-20!172;CL:0000566!5.06e-20!172;CL:0000791!1.18e-19!18;CL:0000789!1.18e-19!18;CL:0002420!1.18e-19!18;CL:0002419!1.18e-19!18;CL:0000790!1.18e-19!18;CL:0002032!4.27e-18!165;CL:0000837!4.27e-18!165;CL:0000988!2.19e-17!182;CL:0000625!2.31e-12!11;CL:0000945!1.70e-11!24;CL:0000826!1.70e-11!24;CL:0000236!3.20e-09!14;CL:0000624!8.20e-08!6 | |ontology_enrichment_celltype=CL:0000542!9.80e-34!53;CL:0000051!9.80e-34!53;CL:0000838!6.66e-33!52;CL:0000738!4.78e-26!140;CL:0002031!4.39e-21!124;CL:0002087!2.41e-20!119;CL:0000084!4.04e-20!25;CL:0000827!4.04e-20!25;CL:0000037!5.06e-20!172;CL:0000566!5.06e-20!172;CL:0000791!1.18e-19!18;CL:0000789!1.18e-19!18;CL:0002420!1.18e-19!18;CL:0002419!1.18e-19!18;CL:0000790!1.18e-19!18;CL:0002032!4.27e-18!165;CL:0000837!4.27e-18!165;CL:0000988!2.19e-17!182;CL:0000625!2.31e-12!11;CL:0000945!1.70e-11!24;CL:0000826!1.70e-11!24;CL:0000236!3.20e-09!14;CL:0000624!8.20e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.45e-28;18!CL:0000789;1.45e-28;18!CL:0002419;1.45e-28;18!CL:0000542;2.50e-26;53!CL:0000084;7.46e-26;25!CL:0000625;1.12e-17;11!CL:0000945;1.95e-17;24!CL:0000236;1.98e-12;13!CL:0000624;7.15e-11;6!CL:0002087;2.36e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.95e-48,53;CL:0000051,8.95e-48,53;CL:0000838,1.55e-46,52;CL:0000791,1.46e-28,18;CL:0000789,1.46e-28,18;CL:0002420,1.46e-28,18;CL:0002419,1.46e-28,18;CL:0000790,1.46e-28,18;CL:0000738,3.06e-28,136;CL:0000084,7.90e-26,25;CL:0000827,7.90e-26,25;CL:0002087,3.08e-24,115;CL:0002031,4.74e-22,120;CL:0000037,4.47e-21,168;CL:0002032,1.02e-19,161;CL:0000837,1.02e-19,161;CL:0000988,4.83e-19,177;CL:0000625,1.16e-17,11;CL:0000945,1.68e-17,24;CL:0000826,1.68e-17,24;CL:0000236,1.71e-13,14;CL:0000624,6.93e-11,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.45e-28;18!CL:0000051;2.50e-26;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.28e-21!115;UBERON:0000178!1.02e-08!15;UBERON:0000179!1.02e-08!15;UBERON:0000463!1.02e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.94e-13;15!UBERON:0000179;5.94e-13;15!UBERON:0000463;5.94e-13;15!UBERON:0002390;6.51e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.92e-13,15;UBERON:0000179,5.92e-13,15;UBERON:0000463,5.92e-13,15;UBERON:0004177,4.04e-08,7;UBERON:0005057,4.04e-08,7;UBERON:0002370,1.38e-07,4;UBERON:0005058,1.38e-07,4;UBERON:0009113,1.38e-07,4;UBERON:0003295,1.38e-07,4;UBERON:0005562,1.38e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56492716904717,6.56804715599566,6.21815172378066,7.08055698328027,14.9693465257913,4.4896675761662,0,0,0,0,0,0.293600439334847,8.30993112797816,5.01361118675354,7.81239134577067,1.56740831967947,3.88672399222775,1.54545340580512,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0.612167784741805,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0,2.42159801053347,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,14.0796995569058,10.3766336139805,16.011166569544,11.5217160092957,16.0158394814405,9.77079147922622,10.5767179645578,9.54053754535364,10.8150464130795,6.45960908308033,5.3518251937532,1.32171328579026,1.68152568894461,0,31.866982758441,25.5456995786957,34.335450332918,48.9856431494687,40.7402833291988,50.1854674078817,37.0170783975031,49.2434219432467,60.0996051248668,66.68170226967,65.5345350311338,38.1712132782512,32.3847775424097,50.4824367133286,47.5322030591659,42.3112505173177,19.722112900554,26.7540828089713,12.5442628565972,60.0539516297101,35.6395059049787,45.0151953582245,30.8684024263793,36.6350226472711,33.8563396005338,24.7117531556577,19.7253405991882,17.0222192835376,31.2326816380865,31.2545972698102,33.6662478737629,24.3944159301926,25.1393784036497,24.7649730639586,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0,0.522389211897802,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,1.93706554829097,4.56121854189699,3.747118788841,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.2930411725759,33.2981984741257,24.7971711088445,29.0055261992231,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8835706384116,15.0999940573032,18.0369572687821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0.693138033939733,0,0,0,0,0,0,0,0,0,3.56826782263054,1.66215201785745,0.671624264166535,0.219259876645935,0.261435451024901,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,9.13405696617905,10.7049208999933,13.6715324921799,16.6762242820452,16.4544909234478,8.43015304550532,8.10047155857172,10.3106272918255,0,0,0,8.54694605578306,0,0,0.637705090915289,0,0,9.52531122257473,0,0,0,0,0,3.55512733383367,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.293016358543788,0,16.2707341045118,0,0,0,0,0,0,0,0,0,1.19548792950642,12.1564922833705,4.53478946137697,0,1.96935688737711,0,11.5031489468578,0,0,0.789147245095469,14.3689855408164,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0.325942115766024,0.638002319463839,0.183195186803725,0.533034776018635,13.2851287654457,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.76915129006678,1.83309043480088,0,0,0,0.134802265961354,0,0,0,0,0,2.36750641709634,2.41981432097328,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,1.92107695265417,0.19980960958213,0.576361668616424,0,0,0,0.248505071130865,0.235694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0,3.41753560563109,1.11712960508902,0.916641696046735,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,7.45125322178903,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,1.57611414598396,0.891727998294968,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,2.24253566392159,0.157204305099666,3.31391244277756,8.43482237080316,3.95223263795889,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930053882193542,0,0,0,8.02986068762783,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,7.24494822463522,0,0,0,0.0634158101939068,0,1.64477330057155,0.496211178389294,0,0,0,1.00885116665647,0.606965604236632,1.36597314810779,0,4.95506146489851,0,0.203909198930495,0,0.236387681767936,0,0.863424021355654,0.157115589916002,0.280272163313789,0,0,0.47775168788705,0.500335809236594,0,0,0,0,0,0,0,0.860454717640555,0,0,2.9637093513365,0.4582137370881,0,0,0,7.55756798837371,0,0,0.205325613712494,0,0,3.74303141539369,0,0,0,0,0,3.47283711485751,1.5299169235277,30.1003069671375,0.245148321753905,20.50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| ||
|short_description=p2@SKAP1 | |short_description=p2@SKAP1 | ||
}} | }} |
Latest revision as of 06:26, 25 September 2015
Short description: | p2@SKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SKAP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 38bp_to_ENST00000336915, NM_001075099, NM_003726, uc002ini.1, uc002inj.1, uc010dbd.1, uc010dbe.1_5end |
EntrezGene: | SKAP1 |
HGNC: | 15605 |
UniProt: | Q86WV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.95e-48 | 53 |
common lymphoid progenitor | 8.95e-48 | 53 |
lymphoid lineage restricted progenitor cell | 1.55e-46 | 52 |
mature alpha-beta T cell | 1.46e-28 | 18 |
alpha-beta T cell | 1.46e-28 | 18 |
immature T cell | 1.46e-28 | 18 |
mature T cell | 1.46e-28 | 18 |
immature alpha-beta T cell | 1.46e-28 | 18 |
leukocyte | 3.06e-28 | 136 |
T cell | 7.90e-26 | 25 |
pro-T cell | 7.90e-26 | 25 |
nongranular leukocyte | 3.08e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 4.74e-22 | 120 |
hematopoietic stem cell | 4.47e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-19 | 161 |
hematopoietic cell | 4.83e-19 | 177 |
CD8-positive, alpha-beta T cell | 1.16e-17 | 11 |
lymphocyte of B lineage | 1.68e-17 | 24 |
pro-B cell | 1.68e-17 | 24 |
B cell | 1.71e-13 | 14 |
CD4-positive, alpha-beta T cell | 6.93e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 5.92e-13 | 15 |
haemolymphatic fluid | 5.92e-13 | 15 |
organism substance | 5.92e-13 | 15 |
hemopoietic organ | 4.04e-08 | 7 |
immune organ | 4.04e-08 | 7 |
thymus | 1.38e-07 | 4 |
hemolymphoid system gland | 1.38e-07 | 4 |
thymic region | 1.38e-07 | 4 |
pharyngeal gland | 1.38e-07 | 4 |
thymus primordium | 1.38e-07 | 4 |