FFCP PHASE1:Hg19::chr5:141488477..141488478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80762 | |EntrezGene=80762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17592 | |HGNC=17592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_ENST00000313129_5end | |association_with_transcript=100bp_to_ENST00000313129_5end | ||
|cluster_id=chr5:141488477..141488478,+ | |||
|description=CAGE_peak_3_at_NDFIP1_5end | |description=CAGE_peak_3_at_NDFIP1_5end | ||
|id=chr5:141488477..141488478,+ | |id=chr5:141488477..141488478,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000875;3.53e-10;3!CL:0002396;3.53e-10;3!CL:0002617;1.38e-07;2!CL:0002536;1.75e-07;2!CL:0000349;2.34e-07;19 | |ontology_enrichment_celltype_v019=CL:0000875;3.53e-10;3!CL:0002396;3.53e-10;3!CL:0002617;1.38e-07;2!CL:0002536;1.75e-07;2!CL:0000349;2.34e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.58e-10,3;CL:0002396,1.58e-10,3;CL:0002393,1.76e-08,9;CL:0002397,1.76e-08,9;CL:0002536,1.17e-07,2;CL:0000349,2.08e-07,19;CL:0002617,2.60e-07,2;CL:0000136,3.20e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.83e-09!115;UBERON:0000062!4.66e-08!511 | |ontology_enrichment_uberon=UBERON:0007023!9.83e-09!115;UBERON:0000062!4.66e-08!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.45e-12;9!UBERON:0000042;3.45e-12;9!UBERON:0003688;7.32e-09;6!UBERON:0002358;7.32e-09;6!UBERON:0003684;7.32e-09;6!UBERON:0001178;7.32e-09;6!UBERON:0005631;8.47e-08;10!UBERON:0000158;8.47e-08;10!UBERON:0000305;1.37e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0004457;3.45e-12;9!UBERON:0000042;3.45e-12;9!UBERON:0003688;7.32e-09;6!UBERON:0002358;7.32e-09;6!UBERON:0003684;7.32e-09;6!UBERON:0001178;7.32e-09;6!UBERON:0005631;8.47e-08;10!UBERON:0000158;8.47e-08;10!UBERON:0000305;1.37e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,4.11e-09,12;UBERON:0000042,4.11e-09,12;UBERON:0003688,6.71e-09,6;UBERON:0002358,6.71e-09,6;UBERON:0003684,6.71e-09,6;UBERON:0001178,6.71e-09,6;UBERON:0005631,6.30e-08,14;UBERON:0000158,6.30e-08,14;UBERON:0000305,8.34e-08,7;UBERON:0004871,8.04e-07,8 | |||
|phase1_expression=3.45188920614058,1.07050261945492,2.96004248601539,0,1.78784437770915,0.872338524100369,0,0.631719873426831,0,0.245733936501509,1.39560233594486,2.40285509343189,1.58260186937072,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.376627918784408,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0,0.587200878669695,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0.971680998056939,0.515151135268373,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,1.26753171787165,1.06302149982522,0.838634582033504,0.22465726229299,0.150176892841506,0.64290234678832,2.56511469367124,1.39241674039363,1.64397738388171,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0.411202997999018,0,0,0.473447805734733,1.94826728407911,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0.226618685395132,0,0,0.506039384039006,0,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0.511450247374121,0.722878304769133,0.50133791063589,1.15877215168659,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,0.458426764241994,0.728590576585084,0,0.324547393654683,0,0.26591592103773,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0.805658634218294,0,0,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0.877955241761676,0.612975591598039,0.600952235626387,0.567160915800105,0.89694817844431,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.257640540045629,0.558350568994769,0.506328996723799,0.487185025805993,0,0.460249493211497,0.646584227275248,0,0.302256294682921,0.339121184620975,0.57978255948989,0,0.286804595389004,0,0.265059536642971,0,0.207322110030741,0,0,0,0.643240938192885,1.38134921352481,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.474541238222193,0,0,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0.503946384596579,0.567100388969546,0.268675568108545,0,0,0.492663237895943,0,0,0.432359860250884,0,0.317489471460845,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,2.08014873822732,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.599837947092342,1.2162378064119,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0.414415513436035,0.36807447515742,0,0.271265023699736,0.415941723061614,0.535286966391485,0.788512075169673,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0.82707210449155,0,0.533637789017222,0.606255142892519,3.32870879020994,0.30239029332968,2.48107807818777,0.61384789315225,2.24528075546459,1.15325234330131,2.04682899626681,0.965123526861645,0,0.154209693802656,0,0.164254312027618,1.55776328755086,0,0,0.601519410909855,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,1.31555925987561,0.522870902049801,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0.460511024178389,0,0,0,0,0.178064071293475,0.330569830721956,0,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,1.26664581178598,1.97576935775941,0.379473173765715,0,0.0962221127255121,0,0,0.376575203107117,0.86101074534246,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.735120647943095,0,0,0.142283686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| ||
|short_description=p3@NDFIP1 | |short_description=p3@NDFIP1 | ||
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Latest revision as of 06:09, 25 September 2015
Short description: | p3@NDFIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NDFIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENST00000313129_5end |
EntrezGene: | NDFIP1 |
HGNC: | 17592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.58e-10 | 3 |
CD14-low, CD16-positive monocyte | 1.58e-10 | 3 |
intermediate monocyte | 1.76e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.76e-08 | 9 |
amniotic epithelial cell | 1.17e-07 | 2 |
extraembryonic cell | 2.08e-07 | 19 |
adipocyte of breast | 2.60e-07 | 2 |
fat cell | 3.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 4.11e-09 | 12 |
serous membrane | 4.11e-09 | 12 |
omentum | 6.71e-09 | 6 |
peritoneum | 6.71e-09 | 6 |
abdominal cavity | 6.71e-09 | 6 |
visceral peritoneum | 6.71e-09 | 6 |
extraembryonic membrane | 6.30e-08 | 14 |
membranous layer | 6.30e-08 | 14 |
amnion | 8.34e-08 | 7 |
somatic layer of lateral plate mesoderm | 8.04e-07 | 8 |