FFCP PHASE1:Hg19::chr9:130636920..130636950,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203 | |EntrezGene=203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=361 | |HGNC=361 | ||
|TSSclassifier=strong | |||
|UniProt=Q53EY8 | |UniProt=Q53EY8 | ||
|association_with_transcript=0bp_to_AK223501_5end | |association_with_transcript=0bp_to_AK223501_5end | ||
|cluster_id=chr9:130636920..130636950,- | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_5_at_AK1_5end | |description=CAGE_peak_5_at_AK1_5end | ||
|id=chr9:130636920..130636950,- | |id=chr9:130636920..130636950,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.22e-19;9!CL:0000447;4.22e-19;9!CL:0000138;3.07e-15;6!CL:0000327;5.43e-11;15!CL:0000135;8.19e-11;3!CL:0000388;8.19e-11;3!CL:0000499;1.02e-10;28!CL:0002327;8.93e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.93e-19,9;CL:0000447,4.93e-19,9;CL:0000058,3.83e-15,6;CL:0000138,3.83e-15,6;CL:0000327,5.93e-11,15;CL:0000135,6.19e-11,3;CL:0000388,6.19e-11,3;CL:0000499,9.94e-11,28;CL:0002327,9.31e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.98e-10;3!DOID:127;5.98e-10;3!DOID:0060072;1.43e-07;4!DOID:114;3.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.73e-10,3;DOID:127,5.73e-10,3;DOID:0060072,1.39e-07,4;DOID:114,2.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.75e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.19e-11;3!UBERON:0000043;8.19e-11;3!UBERON:0007845;8.19e-11;3!UBERON:0001911;8.93e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.19e-11,3;UBERON:0000043,6.19e-11,3;UBERON:0007845,6.19e-11,3;UBERON:0001911,9.31e-09,4;UBERON:0005333,9.31e-09,4;UBERON:0008425,9.31e-09,4;UBERON:0005311,9.31e-09,4 | |||
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| ||
|short_description=p5@AK1 | |short_description=p5@AK1 | ||
}} | }} |
Latest revision as of 06:02, 25 September 2015
Short description: | p5@AK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AK1_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 0bp_to_AK223501_5end |
EntrezGene: | AK1 |
HGNC: | 361 |
UniProt: | Q53EY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.93e-19 | 9 |
carbohydrate secreting cell | 4.93e-19 | 9 |
chondroblast | 3.83e-15 | 6 |
chondrocyte | 3.83e-15 | 6 |
extracellular matrix secreting cell | 5.93e-11 | 15 |
fibrocyte | 6.19e-11 | 3 |
tendon cell | 6.19e-11 | 3 |
stromal cell | 9.94e-11 | 28 |
mammary gland epithelial cell | 9.31e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.19e-11 | 3 |
tendon | 6.19e-11 | 3 |
regular connective tissue | 6.19e-11 | 3 |
mammary gland | 9.31e-09 | 4 |
mammary bud | 9.31e-09 | 4 |
mammary ridge | 9.31e-09 | 4 |
mammary placode | 9.31e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.73e-10 | 3 |
leiomyoma | 5.73e-10 | 3 |
benign neoplasm | 1.39e-07 | 4 |
heart disease | 2.99e-07 | 2 |