FFCP PHASE1:Hg19::chr8:11534462..11534475,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2626 | |EntrezGene=2626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4173 | |HGNC=4173 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUF4 | |UniProt=B3KUF4 | ||
|association_with_transcript=0bp_to_ENST00000528712,ENST00000532977,uc003wub.1,uc011kxb.1_5end | |association_with_transcript=0bp_to_ENST00000528712,ENST00000532977,uc003wub.1,uc011kxb.1_5end | ||
|cluster_id=chr8:11534462..11534475,+ | |||
|description=CAGE_peak_6_at_GATA4_5end | |description=CAGE_peak_6_at_GATA4_5end | ||
|id=chr8:11534462..11534475,+ | |id=chr8:11534462..11534475,+ | ||
|ontology_enrichment_celltype=CL:0002494!7.73e-25!16;CL:0002548!2.80e-21!6;CL:0000174!1.05e-10!3;CL:0000632!2.88e-08!2;CL:0002097!1.31e-07!2;CL:0002322!9.13e-07!5 | |ontology_enrichment_celltype=CL:0002494!7.73e-25!16;CL:0002548!2.80e-21!6;CL:0000174!1.05e-10!3;CL:0000632!2.88e-08!2;CL:0002097!1.31e-07!2;CL:0002322!9.13e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002548;8.15e-13;6!CL:0002494;1.21e-12;16!CL:0000746;6.77e-12;3!CL:0000511;3.91e-10;1!CL:0002625;3.91e-10;1!CL:0000216;3.91e-10;1!CL:0000737;3.81e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,7.06e-13,6;CL:0002494,1.21e-12,16;CL:0000746,8.22e-12,3;CL:0000513,8.22e-12,3;CL:0000511,4.09e-10,1;CL:0002625,4.09e-10,1;CL:0000216,4.09e-10,1;CL:0000737,4.40e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000513;6.77e-12;3!UBERON:0004140;6.59e-10;1!UBERON:0010226;1.10e-09;1!UBERON:0009117;3.22e-08;10!UBERON:0005564;3.22e-08;10 | |||
|ontology_enrichment_disease=DOID:114!1.34e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.04e-17;2!DOID:178;2.08e-09;1!DOID:326;2.08e-09;1!DOID:3978;2.08e-09;1!DOID:3394;2.08e-09;1!DOID:5844;2.08e-09;1!DOID:1287;2.57e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.13e-17,2;DOID:178,2.26e-09,1;DOID:326,2.26e-09,1;DOID:3978,2.26e-09,1;DOID:3394,2.26e-09,1;DOID:5844,2.26e-09,1;DOID:1287,2.68e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.46e-43!27;UBERON:0000948!2.33e-34!24;UBERON:0005498!2.33e-34!24;UBERON:0004140!2.33e-34!24;UBERON:0009881!2.33e-34!24;UBERON:0004141!2.33e-34!24;UBERON:0003084!2.33e-34!24;UBERON:0007005!2.33e-34!24;UBERON:0004139!2.33e-34!24;UBERON:0004291!2.33e-34!24;UBERON:0003103!4.48e-14!69;UBERON:0001048!1.55e-10!168;UBERON:0003914!5.21e-09!118;UBERON:0004872!3.00e-08!84;UBERON:0000473!1.33e-07!8;UBERON:0000991!1.48e-07!21;UBERON:0009196!1.48e-07!21;UBERON:0009117!1.48e-07!21;UBERON:0005564!1.48e-07!21;UBERON:0004176!3.63e-07!22;UBERON:0001009!7.18e-07!113 | |ontology_enrichment_uberon=UBERON:0007100!1.46e-43!27;UBERON:0000948!2.33e-34!24;UBERON:0005498!2.33e-34!24;UBERON:0004140!2.33e-34!24;UBERON:0009881!2.33e-34!24;UBERON:0004141!2.33e-34!24;UBERON:0003084!2.33e-34!24;UBERON:0007005!2.33e-34!24;UBERON:0004139!2.33e-34!24;UBERON:0004291!2.33e-34!24;UBERON:0003103!4.48e-14!69;UBERON:0001048!1.55e-10!168;UBERON:0003914!5.21e-09!118;UBERON:0004872!3.00e-08!84;UBERON:0000473!1.33e-07!8;UBERON:0000991!1.48e-07!21;UBERON:0009196!1.48e-07!21;UBERON:0009117!1.48e-07!21;UBERON:0005564!1.48e-07!21;UBERON:0004176!3.63e-07!22;UBERON:0001009!7.18e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.75e-38;25!UBERON:0000948;6.62e-23;22!UBERON:0002108;3.46e-16;4!UBERON:0000473;2.57e-10;8!UBERON:0001136;3.91e-10;1!UBERON:0001343;3.91e-10;1!UBERON:0004910;3.91e-10;1!UBERON:0004813;3.91e-10;1!UBERON:0002084;1.10e-09;1!UBERON:0002135;1.10e-09;1!UBERON:0002082;1.10e-09;1!UBERON:0005409;3.99e-09;22!UBERON:0000160;8.23e-08;17!UBERON:0003135;1.25e-07;11!UBERON:0003103;3.35e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.77e-35,27;UBERON:0000948,6.54e-21,24;UBERON:0005498,6.54e-21,24;UBERON:0004140,6.54e-21,24;UBERON:0009881,6.54e-21,24;UBERON:0004141,6.54e-21,24;UBERON:0003084,6.54e-21,24;UBERON:0007005,6.54e-21,24;UBERON:0004139,6.54e-21,24;UBERON:0004291,6.54e-21,24;UBERON:0002108,3.47e-16,4;UBERON:0003103,7.32e-13,68;UBERON:0000473,2.65e-10,8;UBERON:0001136,4.09e-10,1;UBERON:0001343,4.09e-10,1;UBERON:0004910,4.09e-10,1;UBERON:0005154,4.09e-10,1;UBERON:0005295,4.09e-10,1;UBERON:0004813,4.09e-10,1;UBERON:0005297,4.09e-10,1;UBERON:0005294,4.09e-10,1;UBERON:0010141,4.09e-10,1;UBERON:0005891,4.09e-10,1;UBERON:0002084,9.70e-10,1;UBERON:0002082,9.70e-10,1;UBERON:0010226,9.70e-10,1;UBERON:0002135,1.25e-09,1;UBERON:0005409,4.98e-08,25;UBERON:0000160,8.16e-08,17;UBERON:0001048,1.05e-07,160;UBERON:0003135,1.28e-07,11;UBERON:0001009,4.14e-07,112;UBERON:0004872,8.75e-07,83 | |||
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| ||
|short_description=p6@GATA4 | |short_description=p6@GATA4 | ||
}} | }} |
Latest revision as of 05:54, 25 September 2015
Short description: | p6@GATA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GATA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528712, ENST00000532977, uc003wub.1, uc011kxb.1_5end |
EntrezGene: | GATA4 |
HGNC: | 4173 |
UniProt: | B3KUF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 7.06e-13 | 6 |
cardiocyte | 1.21e-12 | 16 |
cardiac muscle cell | 8.22e-12 | 3 |
cardiac muscle myoblast | 8.22e-12 | 3 |
androgen binding protein secreting cell | 4.09e-10 | 1 |
seminiferous tubule epithelial cell | 4.09e-10 | 1 |
Sertoli cell | 4.09e-10 | 1 |
striated muscle cell | 4.40e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.77e-35 | 27 |
heart | 6.54e-21 | 24 |
primitive heart tube | 6.54e-21 | 24 |
primary heart field | 6.54e-21 | 24 |
anterior lateral plate mesoderm | 6.54e-21 | 24 |
heart tube | 6.54e-21 | 24 |
heart primordium | 6.54e-21 | 24 |
cardiac mesoderm | 6.54e-21 | 24 |
cardiogenic plate | 6.54e-21 | 24 |
heart rudiment | 6.54e-21 | 24 |
small intestine | 3.47e-16 | 4 |
compound organ | 7.32e-13 | 68 |
testis | 2.65e-10 | 8 |
mesothelium | 4.09e-10 | 1 |
seminiferous tubule of testis | 4.09e-10 | 1 |
epithelium of male gonad | 4.09e-10 | 1 |
epithelial cord | 4.09e-10 | 1 |
sex cord | 4.09e-10 | 1 |
seminiferous tubule epithelium | 4.09e-10 | 1 |
testis sex cord | 4.09e-10 | 1 |
genital ridge | 4.09e-10 | 1 |
primitive sex cord of indifferent gonad | 4.09e-10 | 1 |
coelomic epithelium | 4.09e-10 | 1 |
heart left ventricle | 9.70e-10 | 1 |
cardiac ventricle | 9.70e-10 | 1 |
future cardiac ventricle | 9.70e-10 | 1 |
mitral valve | 1.25e-09 | 1 |
gastrointestinal system | 4.98e-08 | 25 |
intestine | 8.16e-08 | 17 |
primordium | 1.05e-07 | 160 |
male reproductive organ | 1.28e-07 | 11 |
circulatory system | 4.14e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 8.75e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.13e-17 | 2 |
vascular disease | 2.26e-09 | 1 |
ischemia | 2.26e-09 | 1 |
extrinsic cardiomyopathy | 2.26e-09 | 1 |
myocardial ischemia | 2.26e-09 | 1 |
myocardial infarction | 2.26e-09 | 1 |
cardiovascular system disease | 2.68e-09 | 4 |