FFCP PHASE1:Hg19::chr16:2264779..2264847,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:2264779..2264847,- to FFCP PHASE1:Hg19::chr16:2264779..2264847,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283871 | |EntrezGene=283871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8909 | |HGNC=8909 | ||
|TSSclassifier=strong | |||
|UniProt=A6NDG6 | |UniProt=A6NDG6 | ||
|association_with_transcript=0bp_to_ENST00000333503,NM_001042371,uc002cpk.1,uc010uvz.1_5end | |||
|cluster_id=chr16:2264779..2264847,- | |||
|description=CAGE_peak_1_at_PGP_5end | |||
|id=chr16:2264779..2264847,- | |||
|ontology_enrichment_celltype=CL:0000066!5.90e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.30e-07;15!CL:0002681;8.01e-07;12!CL:0002584;8.01e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.18e-08,253;CL:1000449,2.10e-07,15;CL:0002681,8.89e-07,12;CL:0002584,8.89e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.84e-10!312;UBERON:0000483!4.73e-10!309;UBERON:0000064!3.38e-09!219;UBERON:0000025!3.55e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.30e-07;15!UBERON:0004819;2.30e-07;15!UBERON:0001285;2.30e-07;15!UBERON:0007684;2.30e-07;15!UBERON:0001225;8.01e-07;12!UBERON:0008987;8.01e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.22e-10,309;UBERON:0000483,7.62e-10,306;UBERON:0000025,1.39e-07,192;UBERON:0004211,2.10e-07,15;UBERON:0009773,2.10e-07,15;UBERON:0001231,2.10e-07,15;UBERON:0001285,2.10e-07,15;UBERON:0007684,2.10e-07,15;UBERON:0004208,2.10e-07,15;UBERON:0006555,8.09e-07,16;UBERON:0004819,8.09e-07,16;UBERON:0001225,8.89e-07,12;UBERON:0008987,8.89e-07,12 | |||
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| ||
|short_description=p1@PGP | |||
}} | }} |
Latest revision as of 05:37, 25 September 2015
Short description: | p1@PGP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000333503, NM_001042371, uc002cpk.1, uc010uvz.1_5end |
EntrezGene: | PGP |
HGNC: | 8909 |
UniProt: | A6NDG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.18e-08 | 253 |
epithelial cell of nephron | 2.10e-07 | 15 |
kidney cortical cell | 8.89e-07 | 12 |
renal cortical epithelial cell | 8.89e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.22e-10 | 309 |
epithelium | 7.62e-10 | 306 |
tube | 1.39e-07 | 192 |
nephron epithelium | 2.10e-07 | 15 |
renal tubule | 2.10e-07 | 15 |
nephron tubule | 2.10e-07 | 15 |
nephron | 2.10e-07 | 15 |
uriniferous tubule | 2.10e-07 | 15 |
nephrogenic mesenchyme | 2.10e-07 | 15 |
excretory tube | 8.09e-07 | 16 |
kidney epithelium | 8.09e-07 | 16 |
cortex of kidney | 8.89e-07 | 12 |
renal parenchyma | 8.89e-07 | 12 |