FFCP PHASE1:Hg19::chr5:141258401..141258424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5097 | |EntrezGene=5097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8655 | |HGNC=8655 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-426bp_to_ENST00000287008_5end | |association_with_transcript=-426bp_to_ENST00000287008_5end | ||
|cluster_id=chr5:141258401..141258424,- | |||
|description=CAGE_peak_5_at_PCDH1_5end | |description=CAGE_peak_5_at_PCDH1_5end | ||
|id=chr5:141258401..141258424,- | |id=chr5:141258401..141258424,- | ||
|ontology_enrichment_celltype=CL:0000066!2.86e-11!254;CL:0002139!7.56e-11!24;CL:0000115!1.23e-07!35;CL:0000071!1.85e-07!18;CL:0002546!1.85e-07!18;CL:0002322!2.91e-07!5 | |ontology_enrichment_celltype=CL:0000066!2.86e-11!254;CL:0002139!7.56e-11!24;CL:0000115!1.23e-07!35;CL:0000071!1.85e-07!18;CL:0002546!1.85e-07!18;CL:0002322!2.91e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.58e-16;5!CL:0000540;1.64e-13;6!CL:0000404;1.64e-13;6 | |ontology_enrichment_celltype_v019=CL:0002322;8.58e-16;5!CL:0000540;1.64e-13;6!CL:0000404;1.64e-13;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-15,5;CL:0000540,1.65e-13,6;CL:0000031,1.65e-13,6;CL:0000404,1.65e-13,6;CL:0000047,2.91e-10,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.64e-13;6 | |ontology_enrichment_development_v019=CL:0000031;1.64e-13;6 | ||
|ontology_enrichment_disease=DOID:305!1.20e-10!106;DOID:0050687!4.72e-08!143 | |ontology_enrichment_disease=DOID:305!1.20e-10!106;DOID:0050687!4.72e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-17!115;UBERON:0001893!1.02e-14!34;UBERON:0004111!3.96e-14!241;UBERON:0002791!6.44e-14!33;UBERON:0001869!1.50e-13!32;UBERON:0002020!3.31e-13!34;UBERON:0003528!3.31e-13!34;UBERON:0002780!4.11e-13!41;UBERON:0001890!4.11e-13!41;UBERON:0006240!4.11e-13!41;UBERON:0000025!1.04e-12!194;UBERON:0003080!1.33e-12!42;UBERON:0000477!3.48e-12!286;UBERON:0000956!3.64e-12!25;UBERON:0000203!3.64e-12!25;UBERON:0001049!3.99e-12!57;UBERON:0005068!3.99e-12!57;UBERON:0006241!3.99e-12!57;UBERON:0007135!3.99e-12!57;UBERON:0005743!1.24e-11!86;UBERON:0002616!2.22e-11!59;UBERON:0000073!1.47e-10!94;UBERON:0001016!1.47e-10!94;UBERON:0003056!1.54e-10!61;UBERON:0002619!2.67e-10!22;UBERON:0001017!1.01e-09!82;UBERON:0003075!1.71e-09!86;UBERON:0007284!1.71e-09!86;UBERON:0000955!6.01e-09!69;UBERON:0006238!6.01e-09!69;UBERON:0001950!1.01e-08!20;UBERON:0002346!1.38e-08!90;UBERON:0000468!1.71e-08!659;UBERON:0000483!2.96e-08!309;UBERON:0000119!5.90e-08!312;UBERON:0000487!1.81e-07!22;UBERON:0001986!1.85e-07!18;UBERON:0004638!1.85e-07!18;UBERON:0004852!1.85e-07!18;UBERON:0000481!3.80e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!5.11e-17!115;UBERON:0001893!1.02e-14!34;UBERON:0004111!3.96e-14!241;UBERON:0002791!6.44e-14!33;UBERON:0001869!1.50e-13!32;UBERON:0002020!3.31e-13!34;UBERON:0003528!3.31e-13!34;UBERON:0002780!4.11e-13!41;UBERON:0001890!4.11e-13!41;UBERON:0006240!4.11e-13!41;UBERON:0000025!1.04e-12!194;UBERON:0003080!1.33e-12!42;UBERON:0000477!3.48e-12!286;UBERON:0000956!3.64e-12!25;UBERON:0000203!3.64e-12!25;UBERON:0001049!3.99e-12!57;UBERON:0005068!3.99e-12!57;UBERON:0006241!3.99e-12!57;UBERON:0007135!3.99e-12!57;UBERON:0005743!1.24e-11!86;UBERON:0002616!2.22e-11!59;UBERON:0000073!1.47e-10!94;UBERON:0001016!1.47e-10!94;UBERON:0003056!1.54e-10!61;UBERON:0002619!2.67e-10!22;UBERON:0001017!1.01e-09!82;UBERON:0003075!1.71e-09!86;UBERON:0007284!1.71e-09!86;UBERON:0000955!6.01e-09!69;UBERON:0006238!6.01e-09!69;UBERON:0001950!1.01e-08!20;UBERON:0002346!1.38e-08!90;UBERON:0000468!1.71e-08!659;UBERON:0000483!2.96e-08!309;UBERON:0000119!5.90e-08!312;UBERON:0000487!1.81e-07!22;UBERON:0001986!1.85e-07!18;UBERON:0004638!1.85e-07!18;UBERON:0004852!1.85e-07!18;UBERON:0000481!3.80e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002581;1.15e-09;1!UBERON:0002902;1.15e-09;1!UBERON:0001882;1.15e-09;1!UBERON:0002022;1.15e-09;1!UBERON:0009899;1.15e-09;1!UBERON:0005403;1.15e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0002581;1.15e-09;1!UBERON:0002902;1.15e-09;1!UBERON:0001882;1.15e-09;1!UBERON:0002022;1.15e-09;1!UBERON:0009899;1.15e-09;1!UBERON:0005403;1.15e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002581,6.31e-10,1;UBERON:0002022,6.88e-10,1;UBERON:0002902,1.36e-09,1;UBERON:0009899,1.36e-09,1;UBERON:0001882,1.76e-09,1;UBERON:0005403,1.76e-09,1;UBERON:0001017,6.72e-07,81 | |||
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| ||
|short_description=p5@PCDH1 | |short_description=p5@PCDH1 | ||
}} | }} |
Latest revision as of 05:27, 25 September 2015
Short description: | p5@PCDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -426bp_to_ENST00000287008_5end |
EntrezGene: | PCDH1 |
HGNC: | 8655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.16e-15 | 5 |
neuron | 1.65e-13 | 6 |
neuroblast | 1.65e-13 | 6 |
electrically signaling cell | 1.65e-13 | 6 |
neuronal stem cell | 2.91e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
postcentral gyrus | 6.31e-10 | 1 |
insula | 6.88e-10 | 1 |
occipital pole | 1.36e-09 | 1 |
pole of cerebral hemisphere | 1.36e-09 | 1 |
nucleus accumbens | 1.76e-09 | 1 |
ventral striatum | 1.76e-09 | 1 |
central nervous system | 6.72e-07 | 81 |