FFCP PHASE1:Hg19::chr7:111846479..111846492,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:111846479..111846492,- to FFCP PHASE1:Hg19::chr7:111846479..111846492,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9732 | |EntrezGene=9732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19192 | |HGNC=19192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000428084_5end | |||
|cluster_id=chr7:111846479..111846492,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_DOCK4_5end | |||
|id=chr7:111846479..111846492,- | |||
|ontology_enrichment_celltype=CL:0000766!3.92e-26!76;CL:0002057!2.20e-25!42;CL:0002009!9.08e-25!65;CL:0002194!1.62e-23!63;CL:0000576!1.62e-23!63;CL:0000040!1.62e-23!63;CL:0000559!1.62e-23!63;CL:0000860!5.20e-23!45;CL:0000557!1.22e-21!71;CL:0000839!1.42e-19!70;CL:0000763!3.36e-11!112;CL:0000049!3.36e-11!112;CL:0002139!1.34e-10!24;CL:0000115!8.43e-10!35;CL:0000071!9.71e-09!18;CL:0002546!9.71e-09!18;CL:0000738!8.98e-07!140;CL:0002078!9.76e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-26;33!CL:0002057;3.59e-26;33!CL:0000473;1.93e-23;39!CL:0000234;1.93e-23;39!CL:0000576;2.15e-20;48!CL:0000766;1.78e-15;69!CL:0002139;1.29e-12;24!CL:0000071;4.43e-11;18!CL:0000115;1.42e-10;36!CL:0000094;4.64e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.80e-36,72;CL:0002009,7.25e-36,61;CL:0000473,3.59e-35,48;CL:0000234,3.59e-35,48;CL:0002194,3.88e-34,59;CL:0000576,3.88e-34,59;CL:0000040,3.88e-34,59;CL:0000559,3.88e-34,59;CL:0000860,2.04e-33,42;CL:0002057,2.04e-33,42;CL:0000557,2.51e-30,67;CL:0000839,6.90e-28,66;CL:0000763,2.48e-20,108;CL:0000049,2.48e-20,108;CL:0000738,6.62e-14,136;CL:0002139,8.15e-13,24;CL:0000115,2.29e-12,36;CL:0000071,3.77e-11,18;CL:0002546,3.77e-11,18;CL:0002087,7.52e-10,115;CL:0002078,1.30e-08,45;CL:0002031,2.24e-08,120;CL:0000094,4.49e-08,8;CL:0000037,2.61e-07,168;CL:0002032,7.61e-07,161;CL:0000837,7.61e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.64e-24;42!CL:0002546;4.43e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.55e-23!612;UBERON:0000467!8.02e-22!625;UBERON:0000480!1.13e-21!626;UBERON:0002050!1.29e-21!605;UBERON:0005423!1.29e-21!605;UBERON:0000468!1.59e-21!659;UBERON:0000923!2.25e-21!604;UBERON:0005291!2.25e-21!604;UBERON:0006598!2.25e-21!604;UBERON:0002532!2.25e-21!604;UBERON:0007023!3.29e-19!115;UBERON:0001017!9.77e-19!82;UBERON:0001049!1.19e-18!57;UBERON:0005068!1.19e-18!57;UBERON:0006241!1.19e-18!57;UBERON:0007135!1.19e-18!57;UBERON:0002371!2.25e-18!80;UBERON:0005743!8.08e-18!86;UBERON:0001474!1.04e-17!86;UBERON:0004765!6.71e-17!101;UBERON:0001434!6.71e-17!101;UBERON:0002616!1.00e-16!59;UBERON:0000073!2.91e-16!94;UBERON:0001016!2.91e-16!94;UBERON:0000062!3.08e-16!511;UBERON:0002405!4.02e-16!115;UBERON:0000955!1.43e-15!69;UBERON:0006238!1.43e-15!69;UBERON:0002780!2.39e-15!41;UBERON:0001890!2.39e-15!41;UBERON:0006240!2.39e-15!41;UBERON:0002193!3.81e-15!112;UBERON:0003080!3.88e-15!42;UBERON:0002390!1.43e-14!102;UBERON:0003061!1.43e-14!102;UBERON:0003075!1.95e-13!86;UBERON:0007284!1.95e-13!86;UBERON:0001893!8.59e-13!34;UBERON:0002020!1.03e-12!34;UBERON:0003528!1.03e-12!34;UBERON:0002346!1.92e-12!90;UBERON:0002791!2.29e-12!33;UBERON:0001869!8.78e-12!32;UBERON:0000033!9.87e-11!123;UBERON:0000025!1.85e-10!194;UBERON:0002619!1.86e-10!22;UBERON:0003056!2.84e-10!61;UBERON:0004111!3.15e-10!241;UBERON:0000153!4.21e-10!129;UBERON:0007811!4.21e-10!129;UBERON:0004121!6.65e-10!169;UBERON:0001950!1.95e-09!20;UBERON:0000924!2.05e-09!173;UBERON:0006601!2.05e-09!173;UBERON:0000477!2.96e-09!286;UBERON:0003081!4.33e-09!216;UBERON:0000956!5.15e-09!25;UBERON:0000203!5.15e-09!25;UBERON:0001986!9.71e-09!18;UBERON:0004638!9.71e-09!18;UBERON:0004852!9.71e-09!18;UBERON:0002204!5.99e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.96e-14;41!UBERON:0001890;5.96e-14;41!UBERON:0002619;2.39e-13;22!UBERON:0003528;4.50e-13;34!UBERON:0002020;4.50e-13;34!UBERON:0001893;4.61e-13;34!UBERON:0000073;7.31e-13;53!UBERON:0002616;7.31e-13;53!UBERON:0001869;9.43e-13;32!UBERON:0002791;9.48e-13;32!UBERON:0001950;5.58e-12;20!UBERON:0004638;4.43e-11;18!UBERON:0001986;4.43e-11;18!UBERON:0004852;4.43e-11;18!UBERON:0000956;8.71e-11;25!UBERON:0000203;8.71e-11;25!UBERON:0001017;3.51e-08;75!UBERON:0000487;7.32e-08;22!UBERON:0000955;1.08e-07;68!UBERON:0001016;2.94e-07;83!UBERON:0006914;3.69e-07;25 | |||
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| ||
|short_description=p2@DOCK4 | |||
}} | }} |
Latest revision as of 04:57, 25 September 2015
Short description: | p2@DOCK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DOCK4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -13bp_to_ENST00000428084_5end |
EntrezGene: | DOCK4 |
HGNC: | 19192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.80e-36 | 72 |
macrophage dendritic cell progenitor | 7.25e-36 | 61 |
defensive cell | 3.59e-35 | 48 |
phagocyte | 3.59e-35 | 48 |
monopoietic cell | 3.88e-34 | 59 |
monocyte | 3.88e-34 | 59 |
monoblast | 3.88e-34 | 59 |
promonocyte | 3.88e-34 | 59 |
classical monocyte | 2.04e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-33 | 42 |
granulocyte monocyte progenitor cell | 2.51e-30 | 67 |
myeloid lineage restricted progenitor cell | 6.90e-28 | 66 |
myeloid cell | 2.48e-20 | 108 |
common myeloid progenitor | 2.48e-20 | 108 |
leukocyte | 6.62e-14 | 136 |
endothelial cell of vascular tree | 8.15e-13 | 24 |
endothelial cell | 2.29e-12 | 36 |
blood vessel endothelial cell | 3.77e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.77e-11 | 18 |
nongranular leukocyte | 7.52e-10 | 115 |
meso-epithelial cell | 1.30e-08 | 45 |
hematopoietic lineage restricted progenitor cell | 2.24e-08 | 120 |
granulocyte | 4.49e-08 | 8 |
hematopoietic stem cell | 2.61e-07 | 168 |
hematopoietic oligopotent progenitor cell | 7.61e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.61e-07 | 161 |