FFCP PHASE1:Hg19::chr5:140743776..140743784,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr5:140743776..140743784,+ to FFCP PHASE1:Hg19::chr5:140743776..140743784,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56110 | |EntrezGene=56110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8703 | |HGNC=8703 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5G8 | |UniProt=Q9Y5G8 | ||
|association_with_transcript=-113bp_to_ENST00000518069,NM_018918,NM_032054,uc003lju.1,uc011das.1_5end | |||
|cluster_id=chr5:140743776..140743784,+ | |||
|description=CAGE_peak_6_at_PCDHGA5_5end | |||
|id=chr5:140743776..140743784,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;5.35e-20;6!CL:0000047;2.21e-15;2!CL:0000153;1.08e-13;9!CL:0000447;1.08e-13;9!CL:0000327;1.31e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.86e-20,6;CL:0000138,4.86e-20,6;CL:0000153,1.02e-13,9;CL:0000447,1.02e-13,9;CL:0000327,1.27e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.98e-30;1!DOID:4549;9.98e-30;1!DOID:5861;9.98e-30;1!DOID:6496;9.98e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.45e-31!115;UBERON:0001049!3.94e-30!57;UBERON:0005068!3.94e-30!57;UBERON:0006241!3.94e-30!57;UBERON:0007135!3.94e-30!57;UBERON:0001017!1.26e-25!82;UBERON:0005743!1.92e-25!86;UBERON:0002616!1.13e-24!59;UBERON:0003075!2.20e-22!86;UBERON:0007284!2.20e-22!86;UBERON:0000073!5.03e-22!94;UBERON:0001016!5.03e-22!94;UBERON:0003080!9.21e-22!42;UBERON:0002346!6.25e-21!90;UBERON:0002780!3.22e-20!41;UBERON:0001890!3.22e-20!41;UBERON:0006240!3.22e-20!41;UBERON:0000955!1.91e-19!69;UBERON:0006238!1.91e-19!69;UBERON:0001893!7.18e-17!34;UBERON:0002020!1.42e-16!34;UBERON:0003528!1.42e-16!34;UBERON:0001869!4.31e-16!32;UBERON:0002791!1.35e-15!33;UBERON:0002619!5.74e-15!22;UBERON:0003056!2.92e-14!61;UBERON:0001950!3.60e-14!20;UBERON:0000956!8.20e-13!25;UBERON:0000203!8.20e-13!25;UBERON:0003076!1.78e-09!15;UBERON:0003057!1.78e-09!15;UBERON:0004121!2.66e-09!169;UBERON:0000033!6.35e-09!123;UBERON:0000153!6.89e-09!129;UBERON:0007811!6.89e-09!129;UBERON:0000924!7.31e-09!173;UBERON:0006601!7.31e-09!173;UBERON:0000025!3.66e-08!194;UBERON:0001872!3.08e-07!5;UBERON:0004733!3.22e-07!12;UBERON:0002028!3.22e-07!12;UBERON:0007277!3.22e-07!12;UBERON:0002021!6.69e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;7.42e-11;3!UBERON:0004755;7.42e-11;3!UBERON:0001872;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0001872,6.77e-07,5 | |||
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| ||
|short_description=p6@PCDHGA5 | |||
}} | }} |
Latest revision as of 04:04, 25 September 2015
Short description: | p6@PCDHGA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PCDHGA5_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_ENST00000518069, NM_018918, NM_032054, uc003lju.1, uc011das.1_5end |
EntrezGene: | PCDHGA5 |
HGNC: | 8703 |
UniProt: | Q9Y5G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.86e-20 | 6 |
chondrocyte | 4.86e-20 | 6 |
GAG secreting cell | 1.02e-13 | 9 |
carbohydrate secreting cell | 1.02e-13 | 9 |
extracellular matrix secreting cell | 1.27e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
parietal lobe | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |