FFCP PHASE1:Hg19::chr5:140743720..140743735,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:140743720..140743735,+
|short_description=p3@PCDHGA5
|description=CAGE_peak_3_at_PCDHGA5_5end
|association_with_transcript=-162bp_to_ENST00000518069,NM_018...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56110 | |EntrezGene=56110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8703 | |HGNC=8703 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5G8 | |UniProt=Q9Y5G8 | ||
|association_with_transcript=-162bp_to_ENST00000518069,NM_018918,NM_032054,uc003lju.1,uc011das.1_5end | |||
|cluster_id=chr5:140743720..140743735,+ | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_3_at_PCDHGA5_5end | |||
|id=chr5:140743720..140743735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-12;82!UBERON:0006215;9.61e-11;3!UBERON:0010122;2.21e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-38!57;UBERON:0005068!1.05e-38!57;UBERON:0006241!1.05e-38!57;UBERON:0007135!1.05e-38!57;UBERON:0007023!4.23e-38!115;UBERON:0002616!5.78e-33!59;UBERON:0003075!4.82e-31!86;UBERON:0007284!4.82e-31!86;UBERON:0005743!7.25e-31!86;UBERON:0001017!7.64e-31!82;UBERON:0002346!1.22e-30!90;UBERON:0002780!2.08e-28!41;UBERON:0001890!2.08e-28!41;UBERON:0006240!2.08e-28!41;UBERON:0000955!1.08e-27!69;UBERON:0006238!1.08e-27!69;UBERON:0003080!2.25e-27!42;UBERON:0000073!1.01e-25!94;UBERON:0001016!1.01e-25!94;UBERON:0001893!1.57e-24!34;UBERON:0002020!7.92e-24!34;UBERON:0003528!7.92e-24!34;UBERON:0002791!1.36e-23!33;UBERON:0001869!5.69e-23!32;UBERON:0003056!2.86e-20!61;UBERON:0000153!1.00e-17!129;UBERON:0007811!1.00e-17!129;UBERON:0000033!1.18e-17!123;UBERON:0002619!3.42e-17!22;UBERON:0000956!5.44e-17!25;UBERON:0000203!5.44e-17!25;UBERON:0000475!4.82e-16!365;UBERON:0001950!1.37e-15!20;UBERON:0000924!5.01e-15!173;UBERON:0006601!5.01e-15!173;UBERON:0004121!7.17e-15!169;UBERON:0004111!2.39e-13!241;UBERON:0000025!8.65e-13!194;UBERON:0003076!2.64e-12!15;UBERON:0003057!2.64e-12!15;UBERON:0000477!5.34e-12!286;UBERON:0000119!8.74e-12!312;UBERON:0000483!1.75e-11!309;UBERON:0000481!6.42e-10!347;UBERON:0004733!1.19e-09!12;UBERON:0002028!1.19e-09!12;UBERON:0007277!1.19e-09!12;UBERON:0000468!1.33e-09!659;UBERON:0004732!1.28e-08!13;UBERON:0002308!2.42e-08!9;UBERON:0000125!2.42e-08!9;UBERON:0000062!2.72e-08!511;UBERON:0002420!3.92e-08!9;UBERON:0007245!3.92e-08!9;UBERON:0010009!3.92e-08!9;UBERON:0010011!3.92e-08!9;UBERON:0000454!3.92e-08!9;UBERON:0000467!9.41e-08!625;UBERON:0000480!1.16e-07!626;UBERON:0002680!2.70e-07!9;UBERON:0001895!2.70e-07!9;UBERON:0010092!2.70e-07!9;UBERON:0009663!3.65e-07!7;UBERON:0000064!6.71e-07!219;UBERON:0000200!8.00e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.40e-28;34!UBERON:0001869;6.29e-28;32!UBERON:0002791;5.19e-26;32!UBERON:0002619;5.71e-25;22!UBERON:0002780;3.54e-24;41!UBERON:0001890;3.54e-24;41!UBERON:0001950;8.35e-24;20!UBERON:0000073;2.35e-23;53!UBERON:0002616;2.35e-23;53!UBERON:0003528;7.28e-23;34!UBERON:0002020;7.28e-23;34!UBERON:0000956;1.09e-21;25!UBERON:0000203;1.09e-21;25!UBERON:0001017;2.12e-21;75!UBERON:0000955;5.24e-18;68!UBERON:0001016;1.08e-16;83!UBERON:0000369;1.62e-13;4!UBERON:0002435;1.62e-13;4!UBERON:0000204;1.62e-13;4!UBERON:0000200;3.11e-13;6!UBERON:0005383;1.13e-10;3!UBERON:0005382;1.13e-10;3!UBERON:0001870;3.01e-10;3!UBERON:0007023;7.11e-10;114!UBERON:0009663;9.88e-08;7!UBERON:0001873;2.21e-07;2!UBERON:0002360;2.21e-07;2!UBERON:0002702;2.21e-07;2!UBERON:0000094;2.21e-07;2!UBERON:0010743;2.21e-07;2!UBERON:0011216;7.08e-07;132!UBERON:0002021;8.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-45,81;UBERON:0001049,2.51e-45,56;UBERON:0005068,2.51e-45,56;UBERON:0006241,2.51e-45,56;UBERON:0007135,2.51e-45,56;UBERON:0000073,1.62e-41,53;UBERON:0002616,1.62e-41,53;UBERON:0001016,2.93e-40,89;UBERON:0000955,6.57e-38,68;UBERON:0006238,6.57e-38,68;UBERON:0002780,1.59e-36,41;UBERON:0001890,1.59e-36,41;UBERON:0003080,1.59e-36,41;UBERON:0006240,1.59e-36,41;UBERON:0003075,2.86e-35,82;UBERON:0007284,2.86e-35,82;UBERON:0001893,1.54e-33,34;UBERON:0002346,3.04e-33,86;UBERON:0001869,4.18e-32,32;UBERON:0007023,4.85e-32,114;UBERON:0002791,1.11e-28,32;UBERON:0003528,9.13e-27,34;UBERON:0002020,9.13e-27,34;UBERON:0010371,4.75e-26,104;UBERON:0002619,1.22e-25,22;UBERON:0003056,5.73e-25,61;UBERON:0001950,1.60e-24,20;UBERON:0010314,5.77e-23,132;UBERON:0000956,2.83e-22,25;UBERON:0000203,2.83e-22,25;UBERON:0004121,9.24e-22,171;UBERON:0000924,9.24e-22,171;UBERON:0006601,9.24e-22,171;UBERON:0011216,1.40e-18,223;UBERON:0000369,8.93e-14,4;UBERON:0002435,8.93e-14,4;UBERON:0000204,8.93e-14,4;UBERON:0010082,8.93e-14,4;UBERON:0000200,1.42e-13,6;UBERON:0000025,3.10e-13,192;UBERON:0004111,4.73e-12,240;UBERON:0005383,1.10e-10,3;UBERON:0005382,1.10e-10,3;UBERON:0001870,3.02e-10,3;UBERON:0003076,6.14e-10,15;UBERON:0003057,6.14e-10,15;UBERON:0009663,7.12e-08,7;UBERON:0000483,1.90e-07,306;UBERON:0001873,2.16e-07,2;UBERON:0010122,2.16e-07,2;UBERON:0002702,2.63e-07,2;UBERON:0002360,2.71e-07,2;UBERON:0000094,2.71e-07,2;UBERON:0010743,2.71e-07,2;UBERON:0000119,2.74e-07,309;UBERON:0002021,5.35e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0.893922188854576,0,0,1.26343974685366,0,0,0,0,0,0.618831764800233,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.50401373190767,0.724232594804119,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0.949265659568129,0,0,0,0,0,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0.134710672069688,0,1.21085942115945,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.538168907066586,0.640672166455702,0.211931901159562,0.900273288253207,0.206105058476878,0.772921620136887,0.930584281657949,0.843881661206331,0.292311015483596,0.252433774244115,0.276149695926898,0.969876340912871,1.06502877754984,0,0.339121184620975,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,1.52456774533478,1.30139853857622,0,0.502548796003046,0,0,0,0,1.10422342547226,1.00034104211935,0,0,0.178428988797162,0.157702415033935,3.39710103478868,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0,0.306923946576125,0.841980283299221,0.640695746278505,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.534192213880424,0,0,0,0,0,0.31481234683064,0,0,0,0,0.74129687641568,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.430234056612155,0.294747123039363,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,1.1837208676432,0,0,0,1.11321717794222,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,1.52581736317083,3.31737779793674,1.18219047581419,1.53569778007781,0,0,1.84680620409113,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,1.88723172345896,0.802577647298789,0.937057782901357,0,0,0,1.57833761139756,0,1.53036380815245,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0.171986032471617,0,0,0,0.290967049465258,8.11956365561802,1.12990370390266,0,0,1.45614830698521,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,1.11712960508902,1.14580212005842,0,0,0.858452096273142,0.223171457441873,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,1.82248669974074,0,0.157611414598396,0.83927341015997,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.146552233678082,0,0.387848869084652,0.79339561045614,0,0,0.213574825135389,2.04365596629566,0,0,0,0,0,0,0.2506898940227,0,0.983617892129413,0,1.77213635993397,1.58634144372552,1.001527445652,1.14681839138014,0.443716206147409,1.55241007353459,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0.352675943690684,0,1.73418907760441,0,0.957803154342908,1.8460472781668,2.52071696221718,2.21303207885497,0.968853873791107,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0.163771917510097,0,1.41828927698629,0.781078098613847,0.826747186004736,1.39514782426595,2.18789923607288,0,1.48863353516788,0,0,0,1.3451348888753,1.21393120847326,0.455324382702595,0,0,0,0.475788130837822,1.57854656550838,0,0.333694205676207,1.0989032999072,2.35673384874003,0,0.913158720509496,0,0,1.42953088353313,0,0,0,0,0.62164849248911,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0.205325613712494,1.1598144313382,0.971421986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| ||
|short_description=p3@PCDHGA5 | |||
}} | }} |
Latest revision as of 04:03, 25 September 2015
Short description: | p3@PCDHGA5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCDHGA5_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | -162bp_to_ENST00000518069, NM_018918, NM_032054, uc003lju.1, uc011das.1_5end |
EntrezGene: | PCDHGA5 |
HGNC: | 8703 |
UniProt: | Q9Y5G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data