FFCP PHASE1:Hg19::chr9:130026168..130026183,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25425 | |||
|TSSclassifier=strong | |||
|UniProt=C9J8L5,B7Z3Q6 | |||
|association_with_transcript=227bp_to_ENST00000425970,ENST00000435213,uc011mad.1_5end | |||
|cluster_id=chr9:130026168..130026183,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_12_at_GARNL3_5end | |||
|id=chr9:130026168..130026183,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.87e-13;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.75e-22;3!UBERON:0006601;2.81e-12;82!UBERON:0004140;1.09e-08;1!UBERON:0010227;3.44e-08;1!UBERON:0005425;3.44e-08;1 | |||
|ontology_enrichment_disease=DOID:114!6.11e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:169;4.90e-11;6!DOID:171;8.36e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.61e-11,6;DOID:171,6.99e-07,10 | |||
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|short_description=p12@GARNL3 | |||
}} |
Latest revision as of 03:54, 25 September 2015
Short description: | p12@GARNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GARNL3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 227bp_to_ENST00000425970, ENST00000435213, uc011mad.1_5end |
EntrezGene: | GARNL3 |
HGNC: | 25425 |
UniProt: | C9J8L5B7Z3Q6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.61e-11 | 6 |
neuroectodermal tumor | 6.99e-07 | 10 |