FFCP PHASE1:Hg19::chr9:129987613..129987641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84253 | |EntrezGene=84253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25425 | |HGNC=25425 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2Q8 | |UniProt=F2Z2Q8 | ||
|association_with_transcript=0bp_to_ENST00000441134_5end | |association_with_transcript=0bp_to_ENST00000441134_5end | ||
|cluster_id=chr9:129987613..129987641,+ | |||
|description=CAGE_peak_8_at_GARNL3_5end | |description=CAGE_peak_8_at_GARNL3_5end | ||
|id=chr9:129987613..129987641,+ | |id=chr9:129987613..129987641,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.37e-14;3!UBERON:0006241;1.75e-13;3!UBERON:0003057;1.75e-13;3!UBERON:0006601;2.50e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-34!82;UBERON:0005743!4.39e-33!86;UBERON:0000073!5.42e-33!94;UBERON:0001016!5.42e-33!94;UBERON:0001049!8.80e-32!57;UBERON:0005068!8.80e-32!57;UBERON:0006241!8.80e-32!57;UBERON:0007135!8.80e-32!57;UBERON:0000955!7.60e-30!69;UBERON:0006238!7.60e-30!69;UBERON:0007023!1.53e-26!115;UBERON:0002616!2.62e-26!59;UBERON:0001893!1.32e-25!34;UBERON:0003075!1.94e-25!86;UBERON:0007284!1.94e-25!86;UBERON:0002346!2.20e-25!90;UBERON:0002020!3.77e-25!34;UBERON:0003528!3.77e-25!34;UBERON:0002791!1.34e-24!33;UBERON:0002780!5.46e-24!41;UBERON:0001890!5.46e-24!41;UBERON:0006240!5.46e-24!41;UBERON:0001869!1.39e-23!32;UBERON:0003080!4.14e-23!42;UBERON:0002619!1.56e-21!22;UBERON:0000956!4.51e-21!25;UBERON:0000203!4.51e-21!25;UBERON:0000924!1.17e-19!173;UBERON:0006601!1.17e-19!173;UBERON:0001950!1.73e-19!20;UBERON:0004121!2.19e-19!169;UBERON:0000033!3.15e-18!123;UBERON:0000153!7.67e-18!129;UBERON:0007811!7.67e-18!129;UBERON:0003056!7.66e-17!61;UBERON:0003076!9.62e-10!15;UBERON:0003057!9.62e-10!15;UBERON:0004111!9.25e-09!241;UBERON:0000025!4.61e-08!194;UBERON:0000064!6.69e-08!219;UBERON:0000481!7.40e-08!347;UBERON:0000477!9.06e-08!286;UBERON:0000200!1.98e-07!6;UBERON:0001871!3.38e-07!7;UBERON:0000062!4.20e-07!511;UBERON:0000475!5.77e-07!365;UBERON:0004733!6.89e-07!12;UBERON:0002028!6.89e-07!12;UBERON:0007277!6.89e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.22e-34!82;UBERON:0005743!4.39e-33!86;UBERON:0000073!5.42e-33!94;UBERON:0001016!5.42e-33!94;UBERON:0001049!8.80e-32!57;UBERON:0005068!8.80e-32!57;UBERON:0006241!8.80e-32!57;UBERON:0007135!8.80e-32!57;UBERON:0000955!7.60e-30!69;UBERON:0006238!7.60e-30!69;UBERON:0007023!1.53e-26!115;UBERON:0002616!2.62e-26!59;UBERON:0001893!1.32e-25!34;UBERON:0003075!1.94e-25!86;UBERON:0007284!1.94e-25!86;UBERON:0002346!2.20e-25!90;UBERON:0002020!3.77e-25!34;UBERON:0003528!3.77e-25!34;UBERON:0002791!1.34e-24!33;UBERON:0002780!5.46e-24!41;UBERON:0001890!5.46e-24!41;UBERON:0006240!5.46e-24!41;UBERON:0001869!1.39e-23!32;UBERON:0003080!4.14e-23!42;UBERON:0002619!1.56e-21!22;UBERON:0000956!4.51e-21!25;UBERON:0000203!4.51e-21!25;UBERON:0000924!1.17e-19!173;UBERON:0006601!1.17e-19!173;UBERON:0001950!1.73e-19!20;UBERON:0004121!2.19e-19!169;UBERON:0000033!3.15e-18!123;UBERON:0000153!7.67e-18!129;UBERON:0007811!7.67e-18!129;UBERON:0003056!7.66e-17!61;UBERON:0003076!9.62e-10!15;UBERON:0003057!9.62e-10!15;UBERON:0004111!9.25e-09!241;UBERON:0000025!4.61e-08!194;UBERON:0000064!6.69e-08!219;UBERON:0000481!7.40e-08!347;UBERON:0000477!9.06e-08!286;UBERON:0000200!1.98e-07!6;UBERON:0001871!3.38e-07!7;UBERON:0000062!4.20e-07!511;UBERON:0000475!5.77e-07!365;UBERON:0004733!6.89e-07!12;UBERON:0002028!6.89e-07!12;UBERON:0007277!6.89e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.14e-41;34!UBERON:0002619;4.14e-37;22!UBERON:0002791;5.36e-37;32!UBERON:0001869;4.17e-36;32!UBERON:0000956;2.03e-32;25!UBERON:0000203;2.03e-32;25!UBERON:0000073;5.62e-32;53!UBERON:0002616;5.62e-32;53!UBERON:0002780;1.58e-31;41!UBERON:0001890;1.58e-31;41!UBERON:0001950;1.84e-30;20!UBERON:0003528;2.24e-30;34!UBERON:0002020;2.24e-30;34!UBERON:0001017;7.27e-25;75!UBERON:0000955;7.66e-23;68!UBERON:0001016;1.78e-22;83!UBERON:0002240;1.75e-13;3!UBERON:0005174;1.75e-13;3!UBERON:0001137;1.75e-13;3!UBERON:0000349;2.01e-13;5!UBERON:0004733;2.21e-12;12!UBERON:0002028;2.21e-12;12!UBERON:0004732;2.23e-11;13!UBERON:0011216;2.98e-11;132!UBERON:0002420;5.10e-11;9!UBERON:0007245;5.10e-11;9!UBERON:0010009;5.10e-11;9!UBERON:0010011;5.10e-11;9!UBERON:0000454;5.10e-11;9!UBERON:0000200;5.94e-11;6!UBERON:0007023;1.22e-09;114!UBERON:0001871;1.30e-09;6!UBERON:0001954;2.00e-09;2!UBERON:0003022;2.00e-09;2!UBERON:0002421;2.00e-09;2!UBERON:0002600;2.00e-09;2!UBERON:0009663;2.12e-09;7!UBERON:0002680;4.51e-08;9!UBERON:0001895;4.51e-08;9!UBERON:0001872;4.94e-08;5!UBERON:0002021;8.29e-08;5!UBERON:0000125;2.51e-07;9!UBERON:0002308;2.51e-07;9!UBERON:0002037;3.07e-07;6!UBERON:0002298;9.27e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.97e-63,56;UBERON:0005068,2.97e-63,56;UBERON:0006241,2.97e-63,56;UBERON:0007135,2.97e-63,56;UBERON:0001017,2.93e-57,81;UBERON:0000073,6.09e-54,53;UBERON:0002616,6.09e-54,53;UBERON:0000955,9.38e-54,68;UBERON:0006238,9.38e-54,68;UBERON:0001016,7.46e-51,89;UBERON:0001893,3.37e-47,34;UBERON:0003075,2.87e-44,82;UBERON:0007284,2.87e-44,82;UBERON:0002780,2.00e-42,41;UBERON:0001890,2.00e-42,41;UBERON:0003080,2.00e-42,41;UBERON:0006240,2.00e-42,41;UBERON:0002346,6.98e-42,86;UBERON:0001869,7.23e-41,32;UBERON:0002791,8.93e-41,32;UBERON:0003528,3.54e-38,34;UBERON:0002020,3.54e-38,34;UBERON:0002619,1.84e-37,22;UBERON:0010371,7.33e-36,104;UBERON:0000956,9.95e-33,25;UBERON:0000203,9.95e-33,25;UBERON:0001950,6.53e-31,20;UBERON:0010314,1.61e-30,132;UBERON:0003056,6.74e-30,61;UBERON:0007023,1.23e-27,114;UBERON:0004121,1.19e-24,171;UBERON:0000924,1.19e-24,171;UBERON:0006601,1.19e-24,171;UBERON:0011216,8.62e-24,223;UBERON:0003076,1.73e-21,15;UBERON:0003057,1.73e-21,15;UBERON:0000025,1.47e-18,192;UBERON:0002240,2.42e-13,3;UBERON:0005174,2.42e-13,3;UBERON:0001137,2.42e-13,3;UBERON:0004111,2.84e-13,240;UBERON:0000349,2.85e-13,5;UBERON:0004733,2.42e-12,12;UBERON:0002028,2.42e-12,12;UBERON:0007277,2.42e-12,12;UBERON:0000483,3.15e-12,306;UBERON:0000119,5.01e-12,309;UBERON:0004732,2.42e-11,13;UBERON:0000200,4.01e-11,6;UBERON:0002420,4.86e-11,9;UBERON:0007245,4.86e-11,9;UBERON:0010009,4.86e-11,9;UBERON:0010011,4.86e-11,9;UBERON:0000454,4.86e-11,9;UBERON:0001871,7.96e-10,6;UBERON:0009663,1.99e-09,7;UBERON:0001954,3.12e-09,2;UBERON:0003022,3.12e-09,2;UBERON:0002421,3.12e-09,2;UBERON:0002600,3.12e-09,2;UBERON:0001872,2.55e-08,5;UBERON:0002050,3.44e-08,564;UBERON:0002680,4.53e-08,9;UBERON:0001895,4.53e-08,9;UBERON:0010092,4.53e-08,9;UBERON:0002021,6.63e-08,5;UBERON:0005423,1.16e-07,581;UBERON:0000923,1.28e-07,560;UBERON:0010316,1.28e-07,560;UBERON:0005291,1.28e-07,560;UBERON:0006598,1.28e-07,560;UBERON:0010317,1.28e-07,560;UBERON:0002532,1.28e-07,560;UBERON:0000125,2.40e-07,9;UBERON:0002308,2.40e-07,9;UBERON:0000922,2.45e-07,592;UBERON:0002037,3.35e-07,6;UBERON:0006215,3.35e-07,6;UBERON:0002298,9.31e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0.994147647766298,1.40669416410513,0.222617410045812,0,0.422250816255987,0.996239941255349,0,0,0.306806047506464,0.861593638227486,0,0.0898683511473268,0,0,0.493217028184668,0,0,1.93866549219044,1.29875337426592,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.583209226766509,0.520874984799877,0,0.482385754501632,9.15490417902499,2.32216445855572,2.06883333267483,0.438770794307945,0,0.278847488557207,1.07730361905316,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0.392125068635479,0,0.189753732724185,0,0,0,0.282706142867882,5.40971599355228,0,0.0884575645033392,1.22206028986725,0,0,0,2.02203398942031,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,2.14250933141343,0.568679216656392,0.901940516486955,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0,0.19871461170299,3.03891820588218,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0.135904206073614,0.209205692624666,0,0,0,1.50595916781192,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0.223171457441873,2.28423806454869,0,0,0.236349546921671,0.247247575143499,0.26961417541674,0.295282444544246,0,2.38568906942791,1.0896272488926,0,0,0,0,0,2.36923270966296,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.904980694530854,0.39669780522807,0,0,0,0.314408610199332,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,1.95242023843141,1.001527445652,1.14681839138014,0.332787154610557,1.55241007353459,1.52183498429854,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0.967809053062115,0,0,0,0.327609848846413,0,0,0,0.320075189082423,0,0,0.184105950251841,0,0,0.639471856518258,0.754773679776773,0.314531883711793,0.873677105536111,0.33946505990805,0,0.123935764259002,0,0,0.23658523500376,0,0,0,1.41304295212211,1.41696576325585,0.478901577171454,1.23069818544453,0.504143392443436,1.9364030689981,1.29180516505481,0,0.588886311006154,0.353909170043221,0,0,0,0,0.397832444232549,0.601682626794058,0.20170506870352,0,0,0.655087670040387,0.147856086217045,1.48582686160468,0.781078098613847,0.413373593002368,1.77564268542939,2.7348740450911,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0.806637912890455,0,2.65081958609644,1.71009211263408,0.236387681767936,0.333694205676207,0,1.41404030924402,0,0.913158720509496,0,0.47775168788705,0.428859265059938,3.79232668158544,0.348724276104376,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,1.1598144313382,1.94284397223656,1.16969731731053,0.795803100645473,0.118920090777569,0.33883824611688,3.29821550236287,1.66059127923341,0.154348316215889,0.218559560503957,0.470317296361523,0.735444965261716,0,2.1593931382644,1.18818560130834,2.5359343655004,0,0,0.45120521581504,0.299823467774787,0,0,0,0.730336388246517,0,1.29005624836306,0,1.69978725477287,3.05445483238264,0,0,0.462175628631418,0,0,0,0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| ||
|short_description=p8@GARNL3 | |short_description=p8@GARNL3 | ||
}} | }} |
Latest revision as of 03:53, 25 September 2015
Short description: | p8@GARNL3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GARNL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000441134_5end |
EntrezGene: | GARNL3 |
HGNC: | 25425 |
UniProt: | F2Z2Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data