FFCP PHASE1:Hg19::chr11:94439700..94439729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154810 | |EntrezGene=154810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17811 | |HGNC=17811 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDH4 | |UniProt=F8WDH4 | ||
|association_with_transcript=103bp_to_ENST00000299004_5end | |association_with_transcript=103bp_to_ENST00000299004_5end | ||
|cluster_id=chr11:94439700..94439729,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_5_at_AMOTL1_5end | |description=CAGE_peak_5_at_AMOTL1_5end | ||
|id=chr11:94439700..94439729,+ | |id=chr11:94439700..94439729,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.17e-12!43;CL:0002159!2.88e-12!13;CL:0002251!1.86e-09!21;CL:0000622!8.19e-08!5;CL:0000223!2.92e-07!59 | |ontology_enrichment_celltype=CL:0002076!2.17e-12!43;CL:0002159!2.88e-12!13;CL:0002251!1.86e-09!21;CL:0000622!8.19e-08!5;CL:0000223!2.92e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.80e-11;42!CL:0002251;5.88e-11;20!CL:0002166;2.29e-10;3!CL:0002159;2.62e-10;14!CL:0002621;2.91e-10;3!CL:0000622;5.24e-10;5!CL:0002623;1.14e-09;3!CL:0000240;1.56e-08;6!CL:0000311;1.56e-08;6!CL:0000079;1.56e-08;6!CL:0000237;1.56e-08;6!CL:0000154;2.39e-08;6!CL:0002327;1.21e-07;4!CL:0000047;7.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.84e-13,42;CL:0002251,5.59e-11,20;CL:0002166,3.01e-10,3;CL:0002159,3.41e-10,14;CL:0002621,3.53e-10,3;CL:0000622,4.31e-10,5;CL:0002623,8.25e-10,3;CL:0000223,1.86e-08,58;CL:0000240,1.91e-08,6;CL:0000311,1.91e-08,6;CL:0000079,1.91e-08,6;CL:0000237,1.91e-08,6;CL:0000036,1.91e-08,6;CL:0000357,1.91e-08,6;CL:0000114,1.91e-08,6;CL:0000154,2.03e-08,6;CL:0002327,1.33e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;1.56e-08;6!CL:0000114;1.56e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!4.86e-08!14 | |ontology_enrichment_disease=DOID:1749!4.86e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:114;7.94e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.91e-22!115;UBERON:0004121!4.76e-18!169;UBERON:0000924!3.32e-17!173;UBERON:0006601!3.32e-17!173;UBERON:0000153!1.77e-14!129;UBERON:0007811!1.77e-14!129;UBERON:0000166!1.45e-13!21;UBERON:0000033!1.97e-12!123;UBERON:0000161!6.82e-12!35;UBERON:0000165!1.83e-10!28;UBERON:0000930!1.83e-10!28;UBERON:0001004!3.04e-10!72;UBERON:0001049!2.96e-09!57;UBERON:0005068!2.96e-09!57;UBERON:0006241!2.96e-09!57;UBERON:0007135!2.96e-09!57;UBERON:0001044!4.70e-09!6;UBERON:0003293!4.70e-09!6;UBERON:0003294!4.70e-09!6;UBERON:0010047!4.70e-09!6;UBERON:0000167!4.70e-09!6;UBERON:0000467!1.45e-08!625;UBERON:0000468!1.50e-08!659;UBERON:0000480!1.69e-08!626;UBERON:0000475!2.84e-08!365;UBERON:0003408!3.07e-08!10;UBERON:0003102!1.26e-07!95;UBERON:0002780!1.62e-07!41;UBERON:0001890!1.62e-07!41;UBERON:0006240!1.62e-07!41;UBERON:0001017!2.33e-07!82;UBERON:0000062!2.65e-07!511;UBERON:0003080!3.15e-07!42;UBERON:0000922!3.81e-07!612;UBERON:0002616!3.81e-07!59;UBERON:0003075!4.13e-07!86;UBERON:0007284!4.13e-07!86;UBERON:0001893!6.57e-07!34;UBERON:0000078!7.85e-07!18 | |ontology_enrichment_uberon=UBERON:0007023!6.91e-22!115;UBERON:0004121!4.76e-18!169;UBERON:0000924!3.32e-17!173;UBERON:0006601!3.32e-17!173;UBERON:0000153!1.77e-14!129;UBERON:0007811!1.77e-14!129;UBERON:0000166!1.45e-13!21;UBERON:0000033!1.97e-12!123;UBERON:0000161!6.82e-12!35;UBERON:0000165!1.83e-10!28;UBERON:0000930!1.83e-10!28;UBERON:0001004!3.04e-10!72;UBERON:0001049!2.96e-09!57;UBERON:0005068!2.96e-09!57;UBERON:0006241!2.96e-09!57;UBERON:0007135!2.96e-09!57;UBERON:0001044!4.70e-09!6;UBERON:0003293!4.70e-09!6;UBERON:0003294!4.70e-09!6;UBERON:0010047!4.70e-09!6;UBERON:0000167!4.70e-09!6;UBERON:0000467!1.45e-08!625;UBERON:0000468!1.50e-08!659;UBERON:0000480!1.69e-08!626;UBERON:0000475!2.84e-08!365;UBERON:0003408!3.07e-08!10;UBERON:0003102!1.26e-07!95;UBERON:0002780!1.62e-07!41;UBERON:0001890!1.62e-07!41;UBERON:0006240!1.62e-07!41;UBERON:0001017!2.33e-07!82;UBERON:0000062!2.65e-07!511;UBERON:0003080!3.15e-07!42;UBERON:0000922!3.81e-07!612;UBERON:0002616!3.81e-07!59;UBERON:0003075!4.13e-07!86;UBERON:0007284!4.13e-07!86;UBERON:0001893!6.57e-07!34;UBERON:0000078!7.85e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;3.78e-16;28!UBERON:0000161;2.04e-14;19!UBERON:0000166;2.04e-14;19!UBERON:0001044;1.66e-12;6!UBERON:0003293;1.66e-12;6!UBERON:0003294;1.66e-12;6!UBERON:0010047;1.66e-12;6!UBERON:0003408;1.66e-12;6!UBERON:0000167;1.66e-12;6!UBERON:0001949;2.91e-10;3!UBERON:0001041;9.81e-10;14!UBERON:0005090;2.63e-08;2!UBERON:0001630;2.63e-08;2!UBERON:0000341;4.80e-08;2!UBERON:0001708;7.15e-08;4!UBERON:0008895;7.15e-08;4!UBERON:0001911;1.21e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.52e-18,22;UBERON:0000165,1.55e-15,29;UBERON:0000930,1.55e-15,29;UBERON:0001044,1.04e-12,6;UBERON:0003293,1.04e-12,6;UBERON:0003294,1.04e-12,6;UBERON:0010047,1.04e-12,6;UBERON:0000167,1.04e-12,6;UBERON:0000153,3.05e-12,62;UBERON:0007811,3.05e-12,62;UBERON:0000161,4.97e-12,36;UBERON:0003102,3.72e-11,99;UBERON:0001004,9.22e-11,74;UBERON:0000033,1.28e-10,56;UBERON:0001949,3.53e-10,3;UBERON:0007023,1.93e-08,114;UBERON:0005090,2.64e-08,2;UBERON:0001630,2.64e-08,2;UBERON:0000341,4.88e-08,2;UBERON:0001444,5.14e-08,49;UBERON:0004121,6.82e-08,171;UBERON:0000924,6.82e-08,171;UBERON:0006601,6.82e-08,171;UBERON:0001708,8.75e-08,4;UBERON:0008895,8.75e-08,4;UBERON:0001911,1.33e-07,4;UBERON:0005333,1.33e-07,4;UBERON:0008425,1.33e-07,4;UBERON:0005311,1.33e-07,4;UBERON:0003408,1.67e-07,10 | |||
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| ||
|short_description=p5@AMOTL1 | |short_description=p5@AMOTL1 | ||
}} | }} |
Latest revision as of 03:52, 25 September 2015
Short description: | p5@AMOTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AMOTL1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 103bp_to_ENST00000299004_5end |
EntrezGene: | AMOTL1 |
HGNC: | 17811 |
UniProt: | F8WDH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.84e-13 | 42 |
epithelial cell of alimentary canal | 5.59e-11 | 20 |
epithelial cell of Malassez | 3.01e-10 | 3 |
general ecto-epithelial cell | 3.41e-10 | 14 |
gingival epithelial cell | 3.53e-10 | 3 |
acinar cell | 4.31e-10 | 5 |
acinar cell of salivary gland | 8.25e-10 | 3 |
endodermal cell | 1.86e-08 | 58 |
stratified squamous epithelial cell | 1.91e-08 | 6 |
keratin accumulating cell | 1.91e-08 | 6 |
stratified epithelial cell | 1.91e-08 | 6 |
keratinizing barrier epithelial cell | 1.91e-08 | 6 |
epithelial fate stem cell | 1.91e-08 | 6 |
stratified epithelial stem cell | 1.91e-08 | 6 |
surface ectodermal cell | 1.91e-08 | 6 |
protein secreting cell | 2.03e-08 | 6 |
mammary gland epithelial cell | 1.33e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.52e-18 | 22 |
mouth | 1.55e-15 | 29 |
stomodeum | 1.55e-15 | 29 |
saliva-secreting gland | 1.04e-12 | 6 |
gland of oral region | 1.04e-12 | 6 |
gland of foregut | 1.04e-12 | 6 |
oral gland | 1.04e-12 | 6 |
oral cavity | 1.04e-12 | 6 |
anterior region of body | 3.05e-12 | 62 |
craniocervical region | 3.05e-12 | 62 |
orifice | 4.97e-12 | 36 |
surface structure | 3.72e-11 | 99 |
respiratory system | 9.22e-11 | 74 |
head | 1.28e-10 | 56 |
gingival epithelium | 3.53e-10 | 3 |
adult organism | 1.93e-08 | 114 |
muscle structure | 2.64e-08 | 2 |
muscle organ | 2.64e-08 | 2 |
throat | 4.88e-08 | 2 |
subdivision of head | 5.14e-08 | 49 |
ectoderm-derived structure | 6.82e-08 | 171 |
ectoderm | 6.82e-08 | 171 |
presumptive ectoderm | 6.82e-08 | 171 |
jaw skeleton | 8.75e-08 | 4 |
splanchnocranium | 8.75e-08 | 4 |
mammary gland | 1.33e-07 | 4 |
mammary bud | 1.33e-07 | 4 |
mammary ridge | 1.33e-07 | 4 |
mammary placode | 1.33e-07 | 4 |
gland of gut | 1.67e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.56e-08 | 2 |