FFCP PHASE1:Hg19::chr11:94439579..94439590,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:94439579..94439590,+
|short_description=p11@AMOTL1
|description=CAGE_peak_11_at_AMOTL1_5end
|association_with_transcript=-6bp_to_ENST00000299004_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154810 | |EntrezGene=154810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17811 | |HGNC=17811 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDH4 | |UniProt=F8WDH4 | ||
|association_with_transcript=-6bp_to_ENST00000299004_5end | |||
|cluster_id=chr11:94439579..94439590,+ | |||
|coexpression_cluster_id=C1158 | |||
|description=CAGE_peak_11_at_AMOTL1_5end | |||
|id=chr11:94439579..94439590,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.04e-16!43;CL:0002159!3.85e-14!13;CL:0000223!1.63e-12!59;CL:0002251!2.59e-12!21;CL:0000622!1.66e-10!5;CL:0000066!2.09e-10!254;CL:0000154!1.16e-08!6;CL:0000076!4.54e-08!62;CL:0002166!2.20e-07!3;CL:0002621!2.60e-07!3;CL:0002077!3.63e-07!33;CL:0002368!8.95e-07!13;CL:0002623!9.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002251;4.93e-33;20!CL:0002076;1.20e-26;42!CL:0002621;7.36e-21;3!CL:0000317;1.68e-14;2!CL:1000448;1.68e-14;2!CL:0002308;1.68e-14;2!CL:0002140;1.68e-14;2!CL:0000622;5.74e-13;5!CL:0002159;4.77e-12;14!CL:0000154;6.79e-11;6!CL:0002166;3.26e-10;3!CL:0002336;1.81e-08;1!CL:0002261;1.81e-08;1!CL:0002170;1.81e-08;1!CL:1001319;4.25e-08;1!CL:1000600;4.25e-08;1!CL:0002252;4.25e-08;1!CL:0000150;2.02e-07;9!CL:0000362;2.64e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,7.34e-33,20;CL:0002076,1.78e-29,42;CL:0000223,6.23e-24,58;CL:0002621,7.64e-21,3;CL:0000066,2.19e-15,253;CL:0000317,1.68e-14,2;CL:1000448,1.68e-14,2;CL:0002308,1.68e-14,2;CL:0002140,1.68e-14,2;CL:0000622,5.19e-13,5;CL:0002159,3.55e-12,14;CL:0000076,1.85e-11,63;CL:0000154,6.25e-11,6;CL:0002166,2.47e-10,3;CL:0002336,1.88e-08,1;CL:0002261,1.88e-08,1;CL:0002170,1.88e-08,1;CL:1001319,4.41e-08,1;CL:1000600,4.41e-08,1;CL:0002252,4.72e-08,1;CL:0000150,1.92e-07,9;CL:0000362,2.29e-07,9;CL:0002321,4.18e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;7.19e-13;58 | |||
|ontology_enrichment_disease=DOID:1749!1.90e-16!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.27e-24;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.05e-24,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!1.75e-12!35;UBERON:0000166!1.08e-11!21;UBERON:0001004!1.18e-09!72;UBERON:0000165!1.23e-09!28;UBERON:0000930!1.23e-09!28;UBERON:0003102!1.30e-09!95;UBERON:0006562!3.84e-08!11;UBERON:0003729!1.48e-07!5;UBERON:0001949!2.60e-07!3;UBERON:0004119!2.92e-07!169;UBERON:0000925!2.92e-07!169;UBERON:0006595!2.92e-07!169;UBERON:0000153!4.67e-07!129;UBERON:0007811!4.67e-07!129;UBERON:0004121!5.33e-07!169;UBERON:0000974!6.27e-07!10;UBERON:0001444!8.19e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;2.57e-25;13!UBERON:0000344;5.55e-21;20!UBERON:0001949;7.36e-21;3!UBERON:0000161;4.44e-17;19!UBERON:0000166;4.44e-17;19!UBERON:0003343;1.56e-16;4!UBERON:0004785;1.56e-16;4!UBERON:0000165;8.95e-15;28!UBERON:0002419;1.68e-14;2!UBERON:0007771;1.68e-14;2!UBERON:0003297;1.68e-14;2!UBERON:0001821;1.68e-14;2!UBERON:0003487;1.68e-14;2!UBERON:0001820;1.68e-14;2!UBERON:0003350;9.84e-14;8!UBERON:0000974;3.36e-11;6!UBERON:0003929;2.94e-09;7!UBERON:0000486;3.27e-09;12!UBERON:0001828;3.68e-08;8!UBERON:0004645;4.25e-08;1!UBERON:0001256;4.25e-08;1!UBERON:0001259;4.25e-08;1!UBERON:0001708;7.18e-08;4!UBERON:0008895;7.18e-08;4!UBERON:0004923;7.69e-08;55!UBERON:0010371;2.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,4.02e-25,13;UBERON:0001949,7.64e-21,3;UBERON:0000344,7.79e-21,20;UBERON:0003343,2.78e-16,4;UBERON:0004785,2.78e-16,4;UBERON:0000166,1.47e-14,22;UBERON:0002419,1.68e-14,2;UBERON:0007771,1.68e-14,2;UBERON:0003297,1.68e-14,2;UBERON:0001821,1.68e-14,2;UBERON:0003487,1.68e-14,2;UBERON:0001820,1.68e-14,2;UBERON:0005089,1.68e-14,2;UBERON:0005088,1.68e-14,2;UBERON:0000165,3.76e-14,29;UBERON:0000930,3.76e-14,29;UBERON:0000161,4.82e-14,36;UBERON:0003350,1.02e-13,8;UBERON:0003102,1.05e-12,99;UBERON:0000033,1.11e-10,56;UBERON:0000153,1.73e-09,62;UBERON:0007811,1.73e-09,62;UBERON:0001828,3.73e-08,8;UBERON:0004645,4.41e-08,1;UBERON:0001256,4.41e-08,1;UBERON:0001259,4.41e-08,1;UBERON:0001708,5.84e-08,4;UBERON:0008895,5.84e-08,4;UBERON:0001444,6.39e-08,49;UBERON:0001004,1.23e-07,74;UBERON:0004923,5.49e-07,66;UBERON:0000974,8.37e-07,10;UBERON:0004119,9.81e-07,160;UBERON:0000925,9.81e-07,160;UBERON:0006595,9.81e-07,160 | |||
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| ||
|short_description=p11@AMOTL1 | |||
}} | }} |
Latest revision as of 03:49, 25 September 2015
Short description: | p11@AMOTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_AMOTL1_5end |
Coexpression cluster: | C1158_Small_malignant_Gingival_Keratinocyte_cervical_Mallassezderived_oral |
Association with transcript: | -6bp_to_ENST00000299004_5end |
EntrezGene: | AMOTL1 |
HGNC: | 17811 |
UniProt: | F8WDH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 7.34e-33 | 20 |
endo-epithelial cell | 1.78e-29 | 42 |
endodermal cell | 6.23e-24 | 58 |
gingival epithelial cell | 7.64e-21 | 3 |
epithelial cell | 2.19e-15 | 253 |
sebum secreting cell | 1.68e-14 | 2 |
epithelial cell of sweat gland | 1.68e-14 | 2 |
epithelial cell of skin gland | 1.68e-14 | 2 |
acinar cell of sebaceous gland | 1.68e-14 | 2 |
acinar cell | 5.19e-13 | 5 |
general ecto-epithelial cell | 3.55e-12 | 14 |
squamous epithelial cell | 1.85e-11 | 63 |
protein secreting cell | 6.25e-11 | 6 |
epithelial cell of Malassez | 2.47e-10 | 3 |
buccal mucosa cell | 1.88e-08 | 1 |
endothelial cell of viscerocranial mucosa | 1.88e-08 | 1 |
keratinized cell of the oral mucosa | 1.88e-08 | 1 |
bladder cell | 4.41e-08 | 1 |
lower urinary tract cell | 4.41e-08 | 1 |
epithelial cell of esophagus | 4.72e-08 | 1 |
glandular epithelial cell | 1.92e-07 | 9 |
epidermal cell | 2.29e-07 | 9 |
embryonic cell | 4.18e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 4.02e-25 | 13 |
gingival epithelium | 7.64e-21 | 3 |
mucosa | 7.79e-21 | 20 |
mucosa of oral region | 2.78e-16 | 4 |
respiratory system mucosa | 2.78e-16 | 4 |
oral opening | 1.47e-14 | 22 |
skin gland | 1.68e-14 | 2 |
epidermis gland | 1.68e-14 | 2 |
gland of integumental system | 1.68e-14 | 2 |
sebaceous gland | 1.68e-14 | 2 |
skin sebaceous gland | 1.68e-14 | 2 |
sweat gland | 1.68e-14 | 2 |
sweat gland placode | 1.68e-14 | 2 |
sebaceous gland placode | 1.68e-14 | 2 |
mouth | 3.76e-14 | 29 |
stomodeum | 3.76e-14 | 29 |
orifice | 4.82e-14 | 36 |
epithelium of mucosa | 1.02e-13 | 8 |
surface structure | 1.05e-12 | 99 |
head | 1.11e-10 | 56 |
anterior region of body | 1.73e-09 | 62 |
craniocervical region | 1.73e-09 | 62 |
gingiva | 3.73e-08 | 8 |
urinary bladder urothelium | 4.41e-08 | 1 |
wall of urinary bladder | 4.41e-08 | 1 |
mucosa of urinary bladder | 4.41e-08 | 1 |
jaw skeleton | 5.84e-08 | 4 |
splanchnocranium | 5.84e-08 | 4 |
subdivision of head | 6.39e-08 | 49 |
respiratory system | 1.23e-07 | 74 |
organ component layer | 5.49e-07 | 66 |
neck | 8.37e-07 | 10 |
endoderm-derived structure | 9.81e-07 | 160 |
endoderm | 9.81e-07 | 160 |
presumptive endoderm | 9.81e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.05e-24 | 14 |