FFCP PHASE1:Hg19::chr16:2128918..2128926,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7249 | |EntrezGene=7249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12363 | |HGNC=12363 | ||
|TSSclassifier=strong | |||
|UniProt=P49815 | |UniProt=P49815 | ||
|association_with_transcript=-152bp_to_BC025364,BC046929_5end | |association_with_transcript=-152bp_to_BC025364,BC046929_5end | ||
|cluster_id=chr16:2128918..2128926,+ | |||
|coexpression_cluster_id=C1217 | |||
|description=CAGE_peak_20_at_TSC2_5end | |description=CAGE_peak_20_at_TSC2_5end | ||
|id=chr16:2128918..2128926,+ | |id=chr16:2128918..2128926,+ | ||
|ontology_enrichment_celltype=CL:0000362!2.73e-21!8;CL:0000312!1.80e-19!5;CL:0000240!2.47e-16!6;CL:0000311!2.47e-16!6;CL:0000079!2.47e-16!6;CL:0000237!2.47e-16!6;CL:0000036!2.47e-16!6;CL:0000357!2.47e-16!6;CL:0000114!2.47e-16!6;CL:0002621!4.28e-15!3;CL:0002159!3.27e-13!13 | |ontology_enrichment_celltype=CL:0000362!2.73e-21!8;CL:0000312!1.80e-19!5;CL:0000240!2.47e-16!6;CL:0000311!2.47e-16!6;CL:0000079!2.47e-16!6;CL:0000237!2.47e-16!6;CL:0000036!2.47e-16!6;CL:0000357!2.47e-16!6;CL:0000114!2.47e-16!6;CL:0002621!4.28e-15!3;CL:0002159!3.27e-13!13 | ||
|ontology_enrichment_celltype_v019=CL:0002327;5.56e-26;4!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.56e-26,4;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001003!9.67e-19!14;UBERON:0007376!9.67e-19!14;UBERON:0007383!9.67e-19!14;UBERON:0001042!2.94e-17!10;UBERON:0009145!2.94e-17!10;UBERON:0006562!1.03e-15!11;UBERON:0001949!4.28e-15!3;UBERON:0006122!4.06e-12!1;UBERON:0007029!5.62e-12!1;UBERON:0002372!8.64e-12!1;UBERON:0001961!8.64e-12!1;UBERON:0001744!8.64e-12!1;UBERON:0001735!8.64e-12!1;UBERON:0002370!9.63e-12!4;UBERON:0005058!9.63e-12!4;UBERON:0009113!9.63e-12!4;UBERON:0003295!9.63e-12!4;UBERON:0005562!9.63e-12!4;UBERON:0003102!1.15e-09!95;UBERON:0001557!3.45e-09!19;UBERON:0000166!2.91e-08!21;UBERON:0003351!4.04e-08!6;UBERON:0000161!2.18e-07!35;UBERON:0004177!4.46e-07!7;UBERON:0004121!4.89e-07!169;UBERON:0008814!5.64e-07!15;UBERON:0000924!7.77e-07!173;UBERON:0006601!7.77e-07!173 | |ontology_enrichment_uberon=UBERON:0001003!9.67e-19!14;UBERON:0007376!9.67e-19!14;UBERON:0007383!9.67e-19!14;UBERON:0001042!2.94e-17!10;UBERON:0009145!2.94e-17!10;UBERON:0006562!1.03e-15!11;UBERON:0001949!4.28e-15!3;UBERON:0006122!4.06e-12!1;UBERON:0007029!5.62e-12!1;UBERON:0002372!8.64e-12!1;UBERON:0001961!8.64e-12!1;UBERON:0001744!8.64e-12!1;UBERON:0001735!8.64e-12!1;UBERON:0002370!9.63e-12!4;UBERON:0005058!9.63e-12!4;UBERON:0009113!9.63e-12!4;UBERON:0003295!9.63e-12!4;UBERON:0005562!9.63e-12!4;UBERON:0003102!1.15e-09!95;UBERON:0001557!3.45e-09!19;UBERON:0000166!2.91e-08!21;UBERON:0003351!4.04e-08!6;UBERON:0000161!2.18e-07!35;UBERON:0004177!4.46e-07!7;UBERON:0004121!4.89e-07!169;UBERON:0008814!5.64e-07!15;UBERON:0000924!7.77e-07!173;UBERON:0006601!7.77e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.56e-26;4!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0000076,9.39e-14,8;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05103626246943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.869046000142011,0,0,0,0.435433495793923,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05103626246943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.869046000142011,0,0,0,0.435433495793923,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p20@TSC2 | |short_description=p20@TSC2 | ||
}} | }} |
Latest revision as of 03:40, 25 September 2015
Short description: | p20@TSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TSC2_5end |
Coexpression cluster: | C1217_Mammary_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Gingival_Sebocyte |
Association with transcript: | -152bp_to_BC025364, BC046929_5end |
EntrezGene: | TSC2 |
HGNC: | 12363 |
UniProt: | P49815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.56e-26 | 4 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
external ectoderm | 9.39e-14 | 8 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |