FFCP PHASE1:Hg19::chr20:31331767..31331783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149951 | |EntrezGene=149951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16223 | |HGNC=16223 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VX2 | |UniProt=Q86VX2 | ||
|association_with_transcript=19bp_to_ENST00000278980_5end | |association_with_transcript=19bp_to_ENST00000278980_5end | ||
|cluster_id=chr20:31331767..31331783,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_4_at_COMMD7_5end | |description=CAGE_peak_4_at_COMMD7_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.73e-34;5!CL:0000039;3.61e-33;7!CL:0000586;3.61e-33;7!CL:0000540;5.97e-18;6!CL:0000404;5.97e-18;6!CL:0002321;3.35e-11;15!CL:0000167;1.22e-07;1!CL:0000164;1.22e-07;1!CL:0000502;1.22e-07;1!CL:0000172;1.22e-07;1!CL:0002553;1.22e-07;1!CL:0000173;1.22e-07;1 | |ontology_enrichment_celltype_v019=CL:0002322;5.73e-34;5!CL:0000039;3.61e-33;7!CL:0000586;3.61e-33;7!CL:0000540;5.97e-18;6!CL:0000404;5.97e-18;6!CL:0002321;3.35e-11;15!CL:0000167;1.22e-07;1!CL:0000164;1.22e-07;1!CL:0000502;1.22e-07;1!CL:0000172;1.22e-07;1!CL:0002553;1.22e-07;1!CL:0000173;1.22e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.03e-34,5;CL:0000039,3.24e-33,7;CL:0000586,3.24e-33,7;CL:0000540,8.65e-18,6;CL:0000031,8.65e-18,6;CL:0000404,8.65e-18,6;CL:0000047,2.18e-13,8;CL:0002553,1.04e-07,1;CL:0000167,1.44e-07,1;CL:0000164,1.44e-07,1;CL:0000502,1.44e-07,1;CL:0000172,1.44e-07,1;CL:0000173,1.44e-07,1;CL:0002351,1.44e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;5.97e-18;6!UBERON:0009117;1.19e-10;10!UBERON:0005564;1.19e-10;10!CL:0002351;1.22e-07;1 | |ontology_enrichment_development_v019=CL:0000031;5.97e-18;6!UBERON:0009117;1.19e-10;10!UBERON:0005564;1.19e-10;10!CL:0002351;1.22e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;7.28e-18;22!DOID:2994;7.28e-18;22!DOID:178;1.22e-07;1!DOID:326;1.22e-07;1!DOID:3978;1.22e-07;1!DOID:3394;1.22e-07;1!DOID:5844;1.22e-07;1!DOID:4430;1.22e-07;1 | |ontology_enrichment_disease_v019=DOID:3095;7.28e-18;22!DOID:2994;7.28e-18;22!DOID:178;1.22e-07;1!DOID:326;1.22e-07;1!DOID:3978;1.22e-07;1!DOID:3394;1.22e-07;1!DOID:5844;1.22e-07;1!DOID:4430;1.22e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,7.14e-18,22;DOID:2994,7.14e-18,22;DOID:178,1.35e-07,1;DOID:326,1.35e-07,1;DOID:3978,1.35e-07,1;DOID:3394,1.35e-07,1;DOID:5844,1.35e-07,1;DOID:4430,1.44e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.32e-13!86;UBERON:0001049!9.80e-13!57;UBERON:0005068!9.80e-13!57;UBERON:0006241!9.80e-13!57;UBERON:0007135!9.80e-13!57;UBERON:0001017!1.15e-12!82;UBERON:0000073!2.68e-12!94;UBERON:0001016!2.68e-12!94;UBERON:0002616!6.88e-11!59;UBERON:0002780!7.58e-11!41;UBERON:0001890!7.58e-11!41;UBERON:0006240!7.58e-11!41;UBERON:0000955!2.34e-10!69;UBERON:0006238!2.34e-10!69;UBERON:0003080!2.37e-10!42;UBERON:0003075!1.09e-08!86;UBERON:0007284!1.09e-08!86;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0001893!2.49e-08!34;UBERON:0001869!5.80e-08!32;UBERON:0002791!7.55e-08!33;UBERON:0002346!1.06e-07!90;UBERON:0003056!1.87e-07!61;UBERON:0001950!2.43e-07!20;UBERON:0002619!5.43e-07!22 | |ontology_enrichment_uberon=UBERON:0005743!1.32e-13!86;UBERON:0001049!9.80e-13!57;UBERON:0005068!9.80e-13!57;UBERON:0006241!9.80e-13!57;UBERON:0007135!9.80e-13!57;UBERON:0001017!1.15e-12!82;UBERON:0000073!2.68e-12!94;UBERON:0001016!2.68e-12!94;UBERON:0002616!6.88e-11!59;UBERON:0002780!7.58e-11!41;UBERON:0001890!7.58e-11!41;UBERON:0006240!7.58e-11!41;UBERON:0000955!2.34e-10!69;UBERON:0006238!2.34e-10!69;UBERON:0003080!2.37e-10!42;UBERON:0003075!1.09e-08!86;UBERON:0007284!1.09e-08!86;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0001893!2.49e-08!34;UBERON:0001869!5.80e-08!32;UBERON:0002791!7.55e-08!33;UBERON:0002346!1.06e-07!90;UBERON:0003056!1.87e-07!61;UBERON:0001950!2.43e-07!20;UBERON:0002619!5.43e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.81e-13;8!UBERON:0003135;1.08e-09;11!UBERON:0000922;1.62e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.81e-13;8!UBERON:0003135;1.08e-09;11!UBERON:0000922;1.62e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.56e-13,8;UBERON:0003135,1.01e-09,11 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.229240217243854,0.164201178899891,0.157421562627358,0,0.383829398097213,0,0,0,0.369754010166788,0.309868802321207,0.568676929949686,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.822405995998037,0.668745981562712,0.32592226663359,0,0,0.445641827540694,0.883817722424512,0,0,0.512365278902701,0.910415432919148,0.657751618414705,0.829050053357545,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0.272746120590835,0,7.31842236777572,7.81925633096763,5.57730925773688,3.62813692553797,7.56962552626885,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0.560425719967636,0.394061520403854,0.646882724578552,0.256686072559497,0,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.725156697549733,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0.902399225814824,1.46329140498388,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.330569830721956,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,1.92495971052672,0,0.185803175125719,0,0.0711418433484141,0.478278818186467,0,1.34053759092657,1.90506224451495,0,0,0.228234679033192,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.281338832821026,0.445234820091624,0.16480387422676,0,0,0,0,0,0.246169610922139,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.278304294485554,1.99613798001194,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0.723578631752448,0,0.663475559587348,0.295547618953547,0,0.10893846351899,0,0,0,0,3.50054813198111,3.15077378573823,0,0,0,0,0,0,0.225595660617181,0,0,0,0,1.05499032264014,0,0.848118428603645,0,0,0,0,0,0,0.313265848516366,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0.52418000472609,0,0.290268993867255,0.146178634172371,0.164230914106418,0,0.0882561266915003,0,0.137041924646751,0,0.569797163602908,0.195551382734803,0.160317640503067,0,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.410716136675979,0,0,0.262887354279314,0,0.229160424011684,0,1.19807400299395,0,0,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,4.34033500855552,6.32681408347275,4.56984371832104,0,0.77380195455795,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.500763722825999,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0.385239660814607,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0.176689145945881,0,0,0,0.690860683462397,0,0.553033744606923,0,0,0,0,0.2457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| ||
|short_description=p4@COMMD7 | |short_description=p4@COMMD7 | ||
}} | }} |
Latest revision as of 03:34, 25 September 2015
Short description: | p4@COMMD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COMMD7_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 19bp_to_ENST00000278980_5end |
EntrezGene: | COMMD7 |
HGNC: | 16223 |
UniProt: | Q86VX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.03e-34 | 5 |
germ line cell | 3.24e-33 | 7 |
germ cell | 3.24e-33 | 7 |
neuron | 8.65e-18 | 6 |
neuroblast | 8.65e-18 | 6 |
electrically signaling cell | 8.65e-18 | 6 |
neuronal stem cell | 2.18e-13 | 8 |
lung fibroblast | 1.04e-07 | 1 |
peptide hormone secreting cell | 1.44e-07 | 1 |
enteroendocrine cell | 1.44e-07 | 1 |
type D enteroendocrine cell | 1.44e-07 | 1 |
somatostatin secreting cell | 1.44e-07 | 1 |
pancreatic D cell | 1.44e-07 | 1 |
progenitor cell of endocrine pancreas | 1.44e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.56e-13 | 8 |
male reproductive organ | 1.01e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.14e-18 | 22 |
germ cell cancer | 7.14e-18 | 22 |
vascular disease | 1.35e-07 | 1 |
ischemia | 1.35e-07 | 1 |
extrinsic cardiomyopathy | 1.35e-07 | 1 |
myocardial ischemia | 1.35e-07 | 1 |
myocardial infarction | 1.35e-07 | 1 |
somatostatinoma | 1.44e-07 | 1 |