FFCP PHASE1:Hg19::chr9:129677039..129677119,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:129677039..129677119,+ to FFCP PHASE1:Hg19::chr9:129677039..129677119,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9649 | |EntrezGene=9649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16851 | |HGNC=16851 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JS13,Q5JT61,E9PBQ5,B4DR86 | |UniProt=Q5JS13,Q5JT61,E9PBQ5,B4DR86 | ||
|association_with_transcript=0bp_to_ENST00000259351,ENST00000319107,ENST00000373439,ENST00000394011,ENST00000394022,ENST00000424082,ENST00000472427,NM_001190729,NM_001190730,NM_014636,uc004bqo.1,uc011mab.1,uc011mac.1_5end | |||
|cluster_id=chr9:129677039..129677119,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_RALGPS1_5end | |||
|id=chr9:129677039..129677119,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.57e-07!52;CL:0000542!5.27e-07!53;CL:0000051!5.27e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.20e-07,52;CL:0000542,4.74e-07,53;CL:0000051,4.74e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.02e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-44!115;UBERON:0005743!1.50e-32!86;UBERON:0001017!8.04e-32!82;UBERON:0000073!1.68e-31!94;UBERON:0001016!1.68e-31!94;UBERON:0001049!4.13e-31!57;UBERON:0005068!4.13e-31!57;UBERON:0006241!4.13e-31!57;UBERON:0007135!4.13e-31!57;UBERON:0002616!5.54e-26!59;UBERON:0000955!1.19e-25!69;UBERON:0006238!1.19e-25!69;UBERON:0003080!1.59e-24!42;UBERON:0002780!1.84e-24!41;UBERON:0001890!1.84e-24!41;UBERON:0006240!1.84e-24!41;UBERON:0003075!4.54e-24!86;UBERON:0007284!4.54e-24!86;UBERON:0002346!1.47e-23!90;UBERON:0001893!1.52e-20!34;UBERON:0002020!1.62e-20!34;UBERON:0003528!1.62e-20!34;UBERON:0002791!6.57e-20!33;UBERON:0001869!2.85e-19!32;UBERON:0003056!1.35e-17!61;UBERON:0002619!2.93e-15!22;UBERON:0000956!3.32e-15!25;UBERON:0000203!3.32e-15!25;UBERON:0000153!1.09e-14!129;UBERON:0007811!1.09e-14!129;UBERON:0004121!2.60e-14!169;UBERON:0000924!2.65e-14!173;UBERON:0006601!2.65e-14!173;UBERON:0001950!4.08e-14!20;UBERON:0000033!3.94e-13!123;UBERON:0003076!9.33e-08!15;UBERON:0003057!9.33e-08!15;UBERON:0002308!8.81e-07!9;UBERON:0000125!8.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.06e-18;41!UBERON:0001890;4.06e-18;41!UBERON:0001893;6.32e-18;34!UBERON:0003528;6.78e-18;34!UBERON:0002020;6.78e-18;34!UBERON:0001869;8.51e-18;32!UBERON:0002791;9.13e-18;32!UBERON:0000073;5.97e-17;53!UBERON:0002616;5.97e-17;53!UBERON:0002619;1.44e-15;22!UBERON:0000956;1.91e-15;25!UBERON:0000203;1.91e-15;25!UBERON:0001950;2.16e-14;20!UBERON:0007023;1.17e-12;114!UBERON:0001017;9.61e-12;75!UBERON:0000955;1.13e-11;68!UBERON:0001016;9.06e-11;83!UBERON:0000125;6.67e-07;9!UBERON:0002308;6.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.67e-44,114;UBERON:0001017,7.89e-32,81;UBERON:0001049,2.85e-31,56;UBERON:0005068,2.85e-31,56;UBERON:0006241,2.85e-31,56;UBERON:0007135,2.85e-31,56;UBERON:0001016,1.12e-30,89;UBERON:0000073,2.50e-29,53;UBERON:0002616,2.50e-29,53;UBERON:0000955,1.29e-25,68;UBERON:0006238,1.29e-25,68;UBERON:0002780,1.18e-24,41;UBERON:0001890,1.18e-24,41;UBERON:0003080,1.18e-24,41;UBERON:0006240,1.18e-24,41;UBERON:0003075,7.70e-24,82;UBERON:0007284,7.70e-24,82;UBERON:0002346,3.14e-23,86;UBERON:0001893,1.05e-20,34;UBERON:0003528,1.12e-20,34;UBERON:0002020,1.12e-20,34;UBERON:0001869,2.02e-19,32;UBERON:0002791,2.14e-19,32;UBERON:0003056,4.96e-18,61;UBERON:0011216,2.28e-17,223;UBERON:0002619,2.24e-15,22;UBERON:0000956,2.55e-15,25;UBERON:0000203,2.55e-15,25;UBERON:0010371,1.52e-14,104;UBERON:0001950,3.20e-14,20;UBERON:0004121,8.12e-14,171;UBERON:0000924,8.12e-14,171;UBERON:0006601,8.12e-14,171;UBERON:0010314,1.06e-09,132;UBERON:0003076,8.27e-08,15;UBERON:0003057,8.27e-08,15;UBERON:0000125,7.96e-07,9;UBERON:0002308,7.96e-07,9 | |||
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| ||
|short_description=p1@RALGPS1 | |||
}} | }} |
Latest revision as of 03:34, 25 September 2015
Short description: | p1@RALGPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RALGPS1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000259351, ENST00000319107, ENST00000373439, ENST00000394011, ENST00000394022, ENST00000424082, ENST00000472427, NM_001190729, NM_001190730, NM_014636, uc004bqo.1, uc011mab.1, uc011mac.1_5end |
EntrezGene: | RALGPS1 |
HGNC: | 16851 |
UniProt: | Q5JS13Q5JT61E9PBQ5B4DR86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.20e-07 | 52 |
lymphocyte | 4.74e-07 | 53 |
common lymphoid progenitor | 4.74e-07 | 53 |