FFCP PHASE1:Hg19::chr20:31331359..31331433,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:31331359..31331433,- to FFCP PHASE1:Hg19::chr20:31331359..31331433,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149951 | |EntrezGene=149951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16223 | |HGNC=16223 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VX2 | |UniProt=Q86VX2 | ||
|association_with_transcript=369bp_to_ENST00000278980_5end | |||
|cluster_id=chr20:31331359..31331433,- | |||
|description=CAGE_peak_2_at_COMMD7_5end | |||
|id=chr20:31331359..31331433,- | |||
|ontology_enrichment_celltype=CL:0000222!1.11e-20!119;CL:0000183!4.80e-16!59;CL:0000055!1.19e-15!180;CL:0000220!4.48e-15!246;CL:0000192!1.29e-14!42;CL:0000514!1.29e-14!42;CL:0002321!1.92e-14!248;CL:0000187!1.30e-13!54;CL:0000680!4.54e-13!57;CL:0000056!4.54e-13!57;CL:0000355!4.54e-13!57;CL:0000359!9.63e-12!32;CL:0000393!3.88e-10!60;CL:0000211!3.88e-10!60;CL:1000497!7.24e-09!18;CL:0002518!7.24e-09!18;CL:1000449!1.33e-08!16;CL:0000003!8.95e-08!722;CL:0002371!1.64e-07!591;CL:0000144!2.42e-07!625;CL:0000548!3.78e-07!679;CL:0000004!3.78e-07!679;CL:0000255!3.78e-07!679;CL:1000507!4.51e-07!12;CL:1000494!4.51e-07!12;CL:0002681!4.73e-07!13;CL:0002584!4.73e-07!13;CL:0000012!7.41e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.33e-11;32!CL:0000192;1.05e-10;43!CL:1000497;9.59e-09;17!CL:0002518;9.59e-09;17!CL:1000449;1.93e-08;15!CL:0000187;1.28e-07;55!CL:0002681;6.62e-07;12!CL:0002584;6.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.90e-21,121;CL:0002321,7.61e-15,250;CL:0000192,9.28e-15,43;CL:0000514,9.28e-15,43;CL:0000187,8.91e-14,55;CL:0000680,3.08e-13,58;CL:0000056,3.08e-13,58;CL:0000355,3.08e-13,58;CL:0000359,9.37e-12,32;CL:0000393,3.34e-10,61;CL:0000211,3.34e-10,61;CL:1000497,8.48e-09,17;CL:0002518,8.48e-09,17;CL:1000449,1.50e-08,15;CL:0000213,5.42e-07,58;CL:0000215,5.42e-07,58;CL:0002681,5.43e-07,12;CL:0002584,5.43e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.05e-10;43!CL:0000355;4.39e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.54e-15!143;UBERON:0000914!1.01e-13!83;UBERON:0002329!1.01e-13!83;UBERON:0003077!1.01e-13!83;UBERON:0003059!1.01e-13!83;UBERON:0007282!1.01e-13!83;UBERON:0009618!1.01e-13!83;UBERON:0007285!1.01e-13!83;UBERON:0000119!2.59e-13!312;UBERON:0002049!6.55e-13!79;UBERON:0007798!6.55e-13!79;UBERON:0000483!1.12e-12!309;UBERON:0000490!1.15e-12!138;UBERON:0003914!1.87e-12!118;UBERON:0001637!3.04e-12!42;UBERON:0003509!3.04e-12!42;UBERON:0004572!3.04e-12!42;UBERON:0001981!9.06e-12!60;UBERON:0007500!9.06e-12!60;UBERON:0004537!9.06e-12!60;UBERON:0006965!9.06e-12!60;UBERON:0000055!1.37e-11!69;UBERON:0000486!1.39e-11!82;UBERON:0004290!3.58e-11!70;UBERON:0001134!4.00e-11!61;UBERON:0002036!4.00e-11!61;UBERON:0003082!4.00e-11!61;UBERON:0002100!1.49e-10!216;UBERON:0002385!3.21e-10!63;UBERON:0001015!3.21e-10!63;UBERON:0000383!3.21e-10!63;UBERON:0000481!7.83e-10!347;UBERON:0003104!2.04e-09!238;UBERON:0009142!2.04e-09!238;UBERON:0004872!2.06e-09!84;UBERON:0004535!6.71e-09!110;UBERON:0000477!8.57e-09!286;UBERON:0004573!9.58e-09!33;UBERON:0004571!9.58e-09!33;UBERON:0001009!1.15e-08!113;UBERON:0004211!1.33e-08!16;UBERON:0001285!1.33e-08!16;UBERON:0007684!1.33e-08!16;UBERON:0003220!1.33e-08!16;UBERON:0004208!1.33e-08!16;UBERON:0000475!1.63e-08!365;UBERON:0006555!1.10e-07!17;UBERON:0005103!1.10e-07!17;UBERON:0000083!1.10e-07!17;UBERON:0009201!1.10e-07!17;UBERON:0004819!1.10e-07!17;UBERON:0006553!1.10e-07!17;UBERON:0003074!1.10e-07!17;UBERON:0003060!1.10e-07!17;UBERON:0000353!2.27e-07!17;UBERON:0006554!4.04e-07!44;UBERON:0009773!4.51e-07!12;UBERON:0001231!4.51e-07!12;UBERON:0004810!4.51e-07!12;UBERON:0004876!4.63e-07!20;UBERON:0001225!4.73e-07!13;UBERON:0008987!4.73e-07!13;UBERON:0004111!7.00e-07!241;UBERON:0000080!8.60e-07!18;UBERON:0002120!8.60e-07!18;UBERON:0004875!8.60e-07!18;UBERON:0005721!8.60e-07!18;UBERON:0005754!8.60e-07!18;UBERON:0007297!8.60e-07!18;UBERON:0001008!8.94e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.13e-08;42!UBERON:0003509;1.13e-08;42!UBERON:0004572;1.13e-08;42!UBERON:0006555;1.93e-08;15!UBERON:0004819;1.93e-08;15!UBERON:0001285;1.93e-08;15!UBERON:0007684;1.93e-08;15!UBERON:0003914;1.98e-08;74!UBERON:0007500;9.76e-08;56!UBERON:0001981;9.76e-08;56!UBERON:0004537;9.76e-08;56!UBERON:0004573;1.41e-07;33!UBERON:0004571;1.41e-07;33!UBERON:0000353;4.28e-07;15!UBERON:0001225;6.62e-07;12!UBERON:0008987;6.62e-07;12 | |||
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| ||
|short_description=p2@COMMD7 | |||
}} | }} |
Latest revision as of 03:31, 25 September 2015
Short description: | p2@COMMD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COMMD7_5end |
Coexpression cluster: | NA |
Association with transcript: | 369bp_to_ENST00000278980_5end |
EntrezGene: | COMMD7 |
HGNC: | 16223 |
UniProt: | Q86VX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.90e-21 | 121 |
embryonic cell | 7.61e-15 | 250 |
smooth muscle cell | 9.28e-15 | 43 |
smooth muscle myoblast | 9.28e-15 | 43 |
muscle cell | 8.91e-14 | 55 |
muscle precursor cell | 3.08e-13 | 58 |
myoblast | 3.08e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.08e-13 | 58 |
vascular associated smooth muscle cell | 9.37e-12 | 32 |
electrically responsive cell | 3.34e-10 | 61 |
electrically active cell | 3.34e-10 | 61 |
kidney cell | 8.48e-09 | 17 |
kidney epithelial cell | 8.48e-09 | 17 |
epithelial cell of nephron | 1.50e-08 | 15 |
lining cell | 5.42e-07 | 58 |
barrier cell | 5.42e-07 | 58 |
kidney cortical cell | 5.43e-07 | 12 |
renal cortical epithelial cell | 5.43e-07 | 12 |