FFCP PHASE1:Hg19::chr11:94226964..94227025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4361 | |EntrezGene=4361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7230 | |HGNC=7230 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7U8,B3KTC7,F5H742,F5GXT0 | |UniProt=F8W7U8,B3KTC7,F5H742,F5GXT0 | ||
|association_with_transcript=0bp_to_ENST00000393241,ENST00000407439,ENST00000536144,ENST00000536550,ENST00000538923,ENST00000540013,ENST00000541157_5end | |association_with_transcript=0bp_to_ENST00000393241,ENST00000407439,ENST00000536144,ENST00000536550,ENST00000538923,ENST00000540013,ENST00000541157_5end | ||
|cluster_id=chr11:94226964..94227025,- | |||
|description=CAGE_peak_1_at_MRE11A_5end | |description=CAGE_peak_1_at_MRE11A_5end | ||
|id=chr11:94226964..94227025,- | |id=chr11:94226964..94227025,- | ||
|ontology_enrichment_celltype=CL:0000037!2.77e-17!172;CL:0000566!2.77e-17!172;CL:0000988!3.59e-15!182;CL:0002032!4.32e-15!165;CL:0000837!4.32e-15!165;CL:0000542!5.97e-12!53;CL:0000051!5.97e-12!53;CL:0000838!1.69e-11!52;CL:0000738!2.94e-09!140;CL:0000945!1.27e-08!24;CL:0000826!1.27e-08!24;CL:0002031!7.63e-08!124;CL:0002087!4.52e-07!119 | |ontology_enrichment_celltype=CL:0000037!2.77e-17!172;CL:0000566!2.77e-17!172;CL:0000988!3.59e-15!182;CL:0002032!4.32e-15!165;CL:0000837!4.32e-15!165;CL:0000542!5.97e-12!53;CL:0000051!5.97e-12!53;CL:0000838!1.69e-11!52;CL:0000738!2.94e-09!140;CL:0000945!1.27e-08!24;CL:0000826!1.27e-08!24;CL:0002031!7.63e-08!124;CL:0002087!4.52e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.11e-08;24!CL:0000542;2.13e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.34e-16,168;CL:0000988,1.23e-14,177;CL:0002032,4.61e-14,161;CL:0000837,4.61e-14,161;CL:0000542,5.97e-12,53;CL:0000051,5.97e-12,53;CL:0000838,1.69e-11,52;CL:0000945,1.27e-08,24;CL:0000826,1.27e-08,24;CL:0000738,2.09e-08,136;CL:0002031,4.94e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.13e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.71e-27!235;DOID:14566!2.00e-26!239;DOID:0050686!7.44e-17!137;DOID:0050687!4.32e-15!143;DOID:2531!7.71e-14!51;DOID:0060083!7.71e-14!51;DOID:305!1.83e-13!106;DOID:1240!1.28e-11!39;DOID:8692!6.01e-10!31 | |ontology_enrichment_disease=DOID:162!1.71e-27!235;DOID:14566!2.00e-26!239;DOID:0050686!7.44e-17!137;DOID:0050687!4.32e-15!143;DOID:2531!7.71e-14!51;DOID:0060083!7.71e-14!51;DOID:305!1.83e-13!106;DOID:1240!1.28e-11!39;DOID:8692!6.01e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.48e-09;31!DOID:1240;1.54e-09;39!DOID:2531;8.64e-09;51!DOID:0060083;8.64e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.71e-27,235;DOID:14566,2.00e-26,239;DOID:0050686,7.44e-17,137;DOID:0050687,4.32e-15,143;DOID:2531,7.71e-14,51;DOID:0060083,7.71e-14,51;DOID:305,1.83e-13,106;DOID:1240,1.28e-11,39;DOID:8692,6.01e-10,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@MRE11A | |short_description=p1@MRE11A | ||
}} | }} |
Latest revision as of 03:25, 25 September 2015
Short description: | p1@MRE11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRE11A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393241, ENST00000407439, ENST00000536144, ENST00000536550, ENST00000538923, ENST00000540013, ENST00000541157_5end |
EntrezGene: | MRE11A |
HGNC: | 7230 |
UniProt: | F8W7U8B3KTC7F5H742F5GXT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.34e-16 | 168 |
hematopoietic cell | 1.23e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.61e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.61e-14 | 161 |
lymphocyte | 5.97e-12 | 53 |
common lymphoid progenitor | 5.97e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.69e-11 | 52 |
lymphocyte of B lineage | 1.27e-08 | 24 |
pro-B cell | 1.27e-08 | 24 |
leukocyte | 2.09e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 4.94e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.71e-27 | 235 |
disease of cellular proliferation | 2.00e-26 | 239 |
organ system cancer | 7.44e-17 | 137 |
cell type cancer | 4.32e-15 | 143 |
hematologic cancer | 7.71e-14 | 51 |
immune system cancer | 7.71e-14 | 51 |
carcinoma | 1.83e-13 | 106 |
leukemia | 1.28e-11 | 39 |
myeloid leukemia | 6.01e-10 | 31 |