FFCP PHASE1:Hg19::chr7:107883809..107883820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH43 | |UniProt=C9JH43 | ||
|association_with_transcript=-125bp_to_ENST00000417701_5end | |association_with_transcript=-125bp_to_ENST00000417701_5end | ||
|cluster_id=chr7:107883809..107883820,- | |||
|coexpression_cluster_id=C445 | |coexpression_cluster_id=C445 | ||
|description=CAGE_peak_11_at_NRCAM_5end | |description=CAGE_peak_11_at_NRCAM_5end | ||
|id=chr7:107883809..107883820,- | |id=chr7:107883809..107883820,- | ||
|ontology_enrichment_celltype=CL:0000064;8.17e-11;3!CL:0000067;8.17e-11;3!CL:0005012;8.17e-11;3!CL:0002304;8.17e-11;3!CL:0000306;1.82e-08;4!CL:0002222;1.82e-08;4!CL:0002224;1.82e-08;4 | |ontology_enrichment_celltype=CL:0000064!3.15e-20!3;CL:0005012!3.15e-20!3;CL:0000067!3.15e-20!3;CL:0002304!3.15e-20!3;CL:0002605!3.26e-09!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000064;8.17e-11;3!CL:0000067;8.17e-11;3!CL:0005012;8.17e-11;3!CL:0002304;8.17e-11;3!CL:0000306;1.82e-08;4!CL:0002222;1.82e-08;4!CL:0002224;1.82e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.17e-11,3;CL:0000067,8.17e-11,3;CL:0005012,8.17e-11,3;CL:0002304,8.17e-11,3;CL:0000306,1.82e-08,4;CL:0002222,1.82e-08,4;CL:0002224,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.78e-29;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001894;4.15e-64;7!UBERON:0000007;2.00e-56;2!UBERON:0003296;7.46e-29;4!UBERON:0010133;7.46e-29;4!UBERON:0001897;2.05e-15;2!UBERON:0010225;2.05e-15;2!UBERON:0007625;2.30e-11;11!UBERON:0001778;8.17e-11;3!UBERON:0001775;8.17e-11;3!UBERON:0001801;3.88e-09;14!UBERON:0002780;1.52e-08;41!UBERON:0001890;1.52e-08;41!UBERON:0010077;1.82e-08;4!UBERON:0005389;1.82e-08;4!UBERON:0000484;1.82e-08;4!UBERON:0000965;1.82e-08;4!UBERON:0001803;1.82e-08;4!UBERON:0000488;1.96e-08;4!UBERON:0002784;2.26e-08;4!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0000019;5.66e-07;19!UBERON:0000047;5.66e-07;19!UBERON:0004088;5.66e-07;19!UBERON:0010230;5.66e-07;19 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.83e-55!41;UBERON:0001890!1.83e-55!41;UBERON:0006240!1.83e-55!41;UBERON:0003080!4.41e-54!42;UBERON:0003056!7.08e-54!61;UBERON:0001049!2.13e-43!57;UBERON:0005068!2.13e-43!57;UBERON:0006241!2.13e-43!57;UBERON:0007135!2.13e-43!57;UBERON:0001893!7.02e-42!34;UBERON:0002616!8.23e-42!59;UBERON:0003075!1.48e-40!86;UBERON:0007284!1.48e-40!86;UBERON:0001869!5.62e-39!32;UBERON:0002346!1.45e-38!90;UBERON:0000955!3.29e-38!69;UBERON:0006238!3.29e-38!69;UBERON:0002791!8.87e-38!33;UBERON:0002020!1.10e-31!34;UBERON:0003528!1.10e-31!34;UBERON:0001017!1.29e-31!82;UBERON:0005743!5.58e-30!86;UBERON:0000033!3.72e-29!123;UBERON:0000153!1.36e-27!129;UBERON:0007811!1.36e-27!129;UBERON:0000073!8.65e-27!94;UBERON:0001016!8.65e-27!94;UBERON:0000369!2.69e-25!4;UBERON:0002435!2.69e-25!4;UBERON:0000204!2.69e-25!4;UBERON:0010082!2.69e-25!4;UBERON:0009663!2.33e-22!7;UBERON:0001778!3.15e-20!3;UBERON:0001775!3.15e-20!3;UBERON:0004121!7.95e-20!169;UBERON:0005383!2.01e-19!3;UBERON:0005382!2.01e-19!3;UBERON:0000924!2.92e-19!173;UBERON:0006601!2.92e-19!173;UBERON:0007023!1.07e-17!115;UBERON:0000956!1.32e-17!25;UBERON:0000203!1.32e-17!25;UBERON:0002308!2.32e-17!9;UBERON:0002420!2.32e-17!9;UBERON:0000125!2.32e-17!9;UBERON:0007245!2.32e-17!9;UBERON:0010009!2.32e-17!9;UBERON:0010011!2.32e-17!9;UBERON:0000454!2.32e-17!9;UBERON:0001894!2.48e-15!7;UBERON:0006222!2.48e-15!7;UBERON:0000488!2.59e-15!4;UBERON:0000007!3.50e-14!2;UBERON:0001873!1.86e-13!2;UBERON:0010122!1.86e-13!2;UBERON:0001950!2.00e-13!20;UBERON:0000025!1.87e-12!194;UBERON:0002619!3.46e-12!22;UBERON:0001872!1.02e-11!5;UBERON:0000064!1.73e-10!219;UBERON:0002203!2.24e-10!6;UBERON:0001768!2.24e-10!6;UBERON:0000477!7.27e-10!286;UBERON:0000483!9.13e-10!309;UBERON:0007625!9.49e-10!11;UBERON:0000200!1.12e-09!6;UBERON:0000119!1.27e-09!312;UBERON:0004111!3.86e-09!241;UBERON:0000475!2.91e-08!365;UBERON:0002336!1.01e-07!1;UBERON:0001018!1.01e-07!1;UBERON:0002473!1.01e-07!1;UBERON:0005340!1.01e-07!1;UBERON:0002316!1.01e-07!1;UBERON:0003544!1.01e-07!1;UBERON:0001020!1.01e-07!1;UBERON:0005970!1.01e-07!1;UBERON:0002437!1.01e-07!1;UBERON:0001874!1.07e-07!1;UBERON:0001801!1.13e-07!14;UBERON:0007190!1.22e-07!1;UBERON:0001882!1.30e-07!1;UBERON:0005403!1.30e-07!1;UBERON:0003296!1.64e-07!4;UBERON:0010133!1.64e-07!4;UBERON:0002022!1.80e-07!1;UBERON:0002902!2.98e-07!1;UBERON:0009899!2.98e-07!1;UBERON:0002581!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;4.15e-64;7!UBERON:0000007;2.00e-56;2!UBERON:0003296;7.46e-29;4!UBERON:0010133;7.46e-29;4!UBERON:0001897;2.05e-15;2!UBERON:0010225;2.05e-15;2!UBERON:0007625;2.30e-11;11!UBERON:0001778;8.17e-11;3!UBERON:0001775;8.17e-11;3!UBERON:0001801;3.88e-09;14!UBERON:0002780;1.52e-08;41!UBERON:0001890;1.52e-08;41!UBERON:0010077;1.82e-08;4!UBERON:0005389;1.82e-08;4!UBERON:0000484;1.82e-08;4!UBERON:0000965;1.82e-08;4!UBERON:0001803;1.82e-08;4!UBERON:0000488;1.96e-08;4!UBERON:0002784;2.26e-08;4!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0000019;5.66e-07;19!UBERON:0000047;5.66e-07;19!UBERON:0004088;5.66e-07;19!UBERON:0010230;5.66e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,4.15e-64,7;UBERON:0006222,4.15e-64,7;UBERON:0000007,2.00e-56,2;UBERON:0003296,7.46e-29,4;UBERON:0010133,7.46e-29,4;UBERON:0003056,1.25e-16,61;UBERON:0001897,2.05e-15,2;UBERON:0010225,2.05e-15,2;UBERON:0003075,1.71e-12,82;UBERON:0007284,1.71e-12,82;UBERON:0002346,6.27e-12,86;UBERON:0007625,2.30e-11,11;UBERON:0002780,3.23e-11,41;UBERON:0001890,3.23e-11,41;UBERON:0003080,3.23e-11,41;UBERON:0006240,3.23e-11,41;UBERON:0001778,8.17e-11,3;UBERON:0001775,8.17e-11,3;UBERON:0010371,6.41e-10,104;UBERON:0001801,3.88e-09,14;UBERON:0000073,7.90e-09,53;UBERON:0002616,7.90e-09,53;UBERON:0010077,1.82e-08,4;UBERON:0005389,1.82e-08,4;UBERON:0000484,1.82e-08,4;UBERON:0002546,1.82e-08,4;UBERON:0000965,1.82e-08,4;UBERON:0001803,1.82e-08,4;UBERON:0003073,1.82e-08,4;UBERON:0005426,1.82e-08,4;UBERON:0000488,1.96e-08,4;UBERON:0001049,2.18e-08,56;UBERON:0005068,2.18e-08,56;UBERON:0006241,2.18e-08,56;UBERON:0007135,2.18e-08,56;UBERON:0002784,2.26e-08,4;UBERON:0010314,7.30e-08,132;UBERON:0000955,6.64e-07,68;UBERON:0006238,6.64e-07,68 | |||
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|short_description=p11@NRCAM | |short_description=p11@NRCAM | ||
}} | }} |
Latest revision as of 02:43, 25 September 2015
Short description: | p11@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -125bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.17e-11 | 3 |
ciliated epithelial cell | 8.17e-11 | 3 |
multi-ciliated epithelial cell | 8.17e-11 | 3 |
non-pigmented ciliary epithelial cell | 8.17e-11 | 3 |
crystallin accumulating cell | 1.82e-08 | 4 |
vertebrate lens cell | 1.82e-08 | 4 |
lens epithelial cell | 1.82e-08 | 4 |