FFCP PHASE1:Hg19::chr14:65414993..65415011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=376267 | |EntrezGene=376267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20150 | |HGNC=20150 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=202bp_to_BC014511_5end | |association_with_transcript=202bp_to_BC014511_5end | ||
|cluster_id=chr14:65414993..65415011,- | |||
|description=CAGE_peak_6_at_RAB15_5end | |description=CAGE_peak_6_at_RAB15_5end | ||
|id=chr14:65414993..65415011,- | |id=chr14:65414993..65415011,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.00e-11;7!CL:0000586;5.00e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.77e-11,7;CL:0000586,4.77e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.56e-08;10!UBERON:0005564;9.56e-08;10!UBERON:0006215;1.34e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.96e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.17e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.28e-14!32;UBERON:0002020!7.27e-14!34;UBERON:0003528!7.27e-14!34;UBERON:0001893!4.41e-13!34;UBERON:0002791!1.13e-12!33;UBERON:0001017!2.80e-12!82;UBERON:0000956!3.75e-12!25;UBERON:0000203!3.75e-12!25;UBERON:0002616!4.62e-12!59;UBERON:0005743!7.02e-12!86;UBERON:0002619!1.38e-11!22;UBERON:0001049!1.66e-11!57;UBERON:0005068!1.66e-11!57;UBERON:0006241!1.66e-11!57;UBERON:0007135!1.66e-11!57;UBERON:0002780!5.31e-11!41;UBERON:0001890!5.31e-11!41;UBERON:0006240!5.31e-11!41;UBERON:0000955!6.57e-11!69;UBERON:0006238!6.57e-11!69;UBERON:0003080!1.82e-10!42;UBERON:0001950!2.64e-10!20;UBERON:0000073!5.08e-10!94;UBERON:0001016!5.08e-10!94;UBERON:0002346!2.34e-08!90;UBERON:0003075!2.73e-08!86;UBERON:0007284!2.73e-08!86;UBERON:0007023!8.96e-08!115;UBERON:0001871!3.34e-07!7;UBERON:0003056!8.39e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.71e-33;6!UBERON:0002619;2.26e-19;22!UBERON:0001950;2.25e-17;20!UBERON:0000956;6.44e-17;25!UBERON:0000203;6.44e-17;25!UBERON:0000473;1.21e-14;8!UBERON:0002791;5.32e-12;32!UBERON:0001869;5.32e-12;32!UBERON:0002771;6.96e-11;2!UBERON:0001876;6.96e-11;2!UBERON:0001829;6.96e-11;2!UBERON:0003528;8.57e-11;34!UBERON:0002020;8.57e-11;34!UBERON:0003135;1.38e-10;11!UBERON:0001893;3.04e-10;34!UBERON:0000349;2.43e-09;5!UBERON:0000922;2.71e-08;49!UBERON:0002780;1.60e-07;41!UBERON:0001890;1.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.02e-33,6;UBERON:0002619,2.03e-19,22;UBERON:0001950,2.41e-17,20;UBERON:0000956,5.86e-17,25;UBERON:0000203,5.86e-17,25;UBERON:0000473,8.13e-15,8;UBERON:0002791,5.86e-13,32;UBERON:0001869,5.86e-13,32;UBERON:0003528,4.13e-12,34;UBERON:0002020,4.13e-12,34;UBERON:0001893,4.13e-12,34;UBERON:0001876,7.36e-11,2;UBERON:0002771,9.88e-11,2;UBERON:0003135,1.04e-10,11;UBERON:0001829,1.20e-10,2;UBERON:0000073,1.27e-10,53;UBERON:0002616,1.27e-10,53;UBERON:0001049,6.19e-10,56;UBERON:0005068,6.19e-10,56;UBERON:0006241,6.19e-10,56;UBERON:0007135,6.19e-10,56;UBERON:0002780,8.83e-10,41;UBERON:0001890,8.83e-10,41;UBERON:0003080,8.83e-10,41;UBERON:0006240,8.83e-10,41;UBERON:0000349,1.94e-09,5;UBERON:0001017,1.48e-08,81;UBERON:0000955,1.20e-07,68;UBERON:0006238,1.20e-07,68;UBERON:0001016,1.94e-07,89;UBERON:0003075,3.25e-07,82;UBERON:0007284,3.25e-07,82;UBERON:0002346,9.13e-07,86 | |||
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| ||
|short_description=p6@RAB15 | |short_description=p6@RAB15 | ||
}} | }} |
Latest revision as of 02:36, 25 September 2015
Short description: | p6@RAB15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAB15_5end |
Coexpression cluster: | NA |
Association with transcript: | 202bp_to_BC014511_5end |
EntrezGene: | RAB15 |
HGNC: | 20150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.77e-11 | 7 |
germ cell | 4.77e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.02e-33 | 6 |
regional part of cerebral cortex | 2.03e-19 | 22 |
neocortex | 2.41e-17 | 20 |
cerebral cortex | 5.86e-17 | 25 |
pallium | 5.86e-17 | 25 |
testis | 8.13e-15 | 8 |
regional part of telencephalon | 5.86e-13 | 32 |
cerebral hemisphere | 5.86e-13 | 32 |
brain grey matter | 4.13e-12 | 34 |
gray matter | 4.13e-12 | 34 |
telencephalon | 4.13e-12 | 34 |
amygdala | 7.36e-11 | 2 |
middle temporal gyrus | 9.88e-11 | 2 |
male reproductive organ | 1.04e-10 | 11 |
major salivary gland | 1.20e-10 | 2 |
regional part of nervous system | 1.27e-10 | 53 |
regional part of brain | 1.27e-10 | 53 |
neural tube | 6.19e-10 | 56 |
neural rod | 6.19e-10 | 56 |
future spinal cord | 6.19e-10 | 56 |
neural keel | 6.19e-10 | 56 |
regional part of forebrain | 8.83e-10 | 41 |
forebrain | 8.83e-10 | 41 |
anterior neural tube | 8.83e-10 | 41 |
future forebrain | 8.83e-10 | 41 |
limbic system | 1.94e-09 | 5 |
central nervous system | 1.48e-08 | 81 |
brain | 1.20e-07 | 68 |
future brain | 1.20e-07 | 68 |
nervous system | 1.94e-07 | 89 |
neural plate | 3.25e-07 | 82 |
presumptive neural plate | 3.25e-07 | 82 |
neurectoderm | 9.13e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.17e-11 | 2 |