FFCP PHASE1:Hg19::chr1:215178908..215178935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3776 | |EntrezGene=3776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |HGNC=6277 | ||
|TSSclassifier=strong | |||
|UniProt=O95069,Q6ZW95 | |UniProt=O95069,Q6ZW95 | ||
|association_with_transcript=23bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |association_with_transcript=23bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | ||
|cluster_id=chr1:215178908..215178935,+ | |||
|coexpression_cluster_id=C633 | |coexpression_cluster_id=C633 | ||
|description=CAGE_peak_3_at_KCNK2_5end | |description=CAGE_peak_3_at_KCNK2_5end | ||
|id=chr1:215178908..215178935,+ | |id=chr1:215178908..215178935,+ | ||
|ontology_enrichment_celltype=CL:0000057!8.26e-27!75;CL:0000055!1.25e-20!180;CL:0002620!4.18e-20!23;CL:0002334!2.78e-10!12;CL:0000048!1.99e-09!430;CL:0000723!6.39e-09!436;CL:0000034!2.83e-08!444;CL:0002556!6.70e-08!6;CL:0000134!2.23e-07!358;CL:0002320!3.41e-07!365 | |ontology_enrichment_celltype=CL:0000057!8.26e-27!75;CL:0000055!1.25e-20!180;CL:0002620!4.18e-20!23;CL:0002334!2.78e-10!12;CL:0000048!1.99e-09!430;CL:0000723!6.39e-09!436;CL:0000034!2.83e-08!444;CL:0002556!6.70e-08!6;CL:0000134!2.23e-07!358;CL:0002320!3.41e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.70e-18;23!CL:0002334;2.08e-16;12!CL:0000057;3.62e-10;73!CL:0002580;1.59e-09;3!CL:0002570;7.12e-09;8!CL:0000197;1.89e-08;6!CL:0000098;1.89e-08;6!CL:0002167;1.89e-08;6!CL:0002579;2.20e-08;3!CL:0000062;6.92e-07;9!CL:0002320;9.20e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.38e-29,76;CL:0002620,4.01e-18,23;CL:0002334,1.32e-16,12;CL:0000134,2.53e-11,354;CL:0002320,7.63e-11,361;CL:0000048,5.24e-10,427;CL:0000219,7.74e-10,386;CL:0000723,1.14e-09,433;CL:0002580,1.66e-09,3;CL:0000034,3.10e-09,441;CL:0002570,7.44e-09,8;CL:0002579,1.49e-08,3;CL:0000197,1.91e-08,6;CL:0000098,1.91e-08,6;CL:0002167,1.91e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.64e-08!5;DOID:450!3.64e-08!5;DOID:66!3.64e-08!5;DOID:423!3.64e-08!5;DOID:0080000!3.64e-08!5;DOID:11722!3.64e-08!5 | |ontology_enrichment_disease=DOID:17!3.64e-08!5;DOID:450!3.64e-08!5;DOID:66!3.64e-08!5;DOID:423!3.64e-08!5;DOID:0080000!3.64e-08!5;DOID:11722!3.64e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.05e-14;5!DOID:450;1.05e-14;5!DOID:66;1.05e-14;5!DOID:423;1.05e-14;5!DOID:0080000;1.05e-14;5!DOID:11722;1.05e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.28e-14,5;DOID:450,1.28e-14,5;DOID:66,1.28e-14,5;DOID:423,1.28e-14,5;DOID:0080000,1.28e-14,5;DOID:11722,1.28e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.04e-15!45;UBERON:0002416!2.04e-15!45;UBERON:0002097!3.31e-14!40;UBERON:0003102!9.82e-13!95;UBERON:0000475!1.07e-09!365;UBERON:0000914!3.46e-08!83;UBERON:0002329!3.46e-08!83;UBERON:0003077!3.46e-08!83;UBERON:0003059!3.46e-08!83;UBERON:0007282!3.46e-08!83;UBERON:0009618!3.46e-08!83;UBERON:0007285!3.46e-08!83;UBERON:0002384!5.23e-08!375;UBERON:0001758!6.70e-08!6;UBERON:0003672!6.70e-08!6 | |ontology_enrichment_uberon=UBERON:0002199!2.04e-15!45;UBERON:0002416!2.04e-15!45;UBERON:0002097!3.31e-14!40;UBERON:0003102!9.82e-13!95;UBERON:0000475!1.07e-09!365;UBERON:0000914!3.46e-08!83;UBERON:0002329!3.46e-08!83;UBERON:0003077!3.46e-08!83;UBERON:0003059!3.46e-08!83;UBERON:0007282!3.46e-08!83;UBERON:0009618!3.46e-08!83;UBERON:0007285!3.46e-08!83;UBERON:0002384!5.23e-08!375;UBERON:0001758!6.70e-08!6;UBERON:0003672!6.70e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.63e-13;41!UBERON:0003688;1.25e-10;6!UBERON:0002358;1.25e-10;6!UBERON:0003684;1.25e-10;6!UBERON:0001178;1.25e-10;6!UBERON:0002199;4.34e-10;46!UBERON:0002416;4.34e-10;46!UBERON:0004457;1.01e-09;9!UBERON:0000042;1.01e-09;9!UBERON:0003102;6.35e-08;50!UBERON:0000310;5.14e-07;10!UBERON:0002384;8.72e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.85e-16,41;UBERON:0002199,2.30e-15,46;UBERON:0002416,2.30e-15,46;UBERON:0002384,3.68e-12,371;UBERON:0003688,1.24e-10,6;UBERON:0002358,1.24e-10,6;UBERON:0003684,1.24e-10,6;UBERON:0001178,1.24e-10,6;UBERON:0003102,3.90e-10,99;UBERON:0004457,3.86e-07,12;UBERON:0000042,3.86e-07,12;UBERON:0000310,4.92e-07,10 | |||
|phase1_expression=6.7221000330106,2.5692062866918,2.25527046553554,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,3.03913227994991,2.25095607382472,2.86836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0.352303495931295,0.323745888736263,0.561803226808994,0,0.368502951935304,0,5.94001428641027,4.20353779773547,0,0,0.168336113954066,0.125118519871964,0.831192346452549,14.4862614890677,17.4698043605441,5.10809400282429,0,6.09924761342131,7.47450860864986,9.11307174986116,3.00091096084402,4.32820622801443,2.31876486041066,2.97786970130544,7.93248761533951,4.67697624773753,3.78650661366172,9.66523935744143,0.646584227275248,4.61512470271599,2.82105875037393,0.67824236924195,0,0,0,0,0,0,0,0,0,3.12899064659632,5.78916844373597,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,1.24675085895615,0,0,0,1.59562869950922,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5582143024431,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40724239980099,27.2996352859657,11.8276811275451,20.031181963754,2.10662269809403,2.27407504055985,0,1.99267679560631,1.10621501125022,1.21637060255316,0.391602314925481,0,0,0,0,0,0,0,6.69891081110698,6.59886485138669,5.3325417942284,1.53766979106841,4.60536524160033,1.93024705372329,0,0.154209693802656,1.77561725313127,1.88892458831761,0,1.16210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45006077438183,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0,0.712256285173899,0,0,0,0,1.39453664789186,1.5740617341532,0.6970372701606,0,0,0,0,0,1.116475108079,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,1.47775344708365,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,9.02014804219242,0,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0,1.25336261431701,0,0,0,0,3.20591576906518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,2.23882204330311,9.81595901358343,3.32883516901568,0.947015026375446,2.0125432140206,0.889811221596536,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0.797525143673985,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0.800055529326307,5.49433128292469,7.40848875285022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63210441568205,0,0,1.41070377476274,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,1.98916222116275,0,0.40341013740704,0,0,0,0,0,0,0,0.253663240775627,1.09394961803644,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0,0,2.40083213212386,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0,0,1.16241425368125,0,0,0,0.17071847709395,0,0,0.828324005113957,0.255640214277473,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.6906229103336,1.35941691750254,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0.872701380680755,0,6.69591032700152,0.924351257262837,7.7872781182282,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=6.7221000330106,2.5692062866918,2.25527046553554,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,3.03913227994991,2.25095607382472,2.86836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0.352303495931295,0.323745888736263,0.561803226808994,0,0.368502951935304,0,5.94001428641027,4.20353779773547,0,0,0.168336113954066,0.125118519871964,0.831192346452549,14.4862614890677,17.4698043605441,5.10809400282429,0,6.09924761342131,7.47450860864986,9.11307174986116,3.00091096084402,4.32820622801443,2.31876486041066,2.97786970130544,7.93248761533951,4.67697624773753,3.78650661366172,9.66523935744143,0.646584227275248,4.61512470271599,2.82105875037393,0.67824236924195,0,0,0,0,0,0,0,0,0,3.12899064659632,5.78916844373597,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,1.24675085895615,0,0,0,1.59562869950922,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5582143024431,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40724239980099,27.2996352859657,11.8276811275451,20.031181963754,2.10662269809403,2.27407504055985,0,1.99267679560631,1.10621501125022,1.21637060255316,0.391602314925481,0,0,0,0,0,0,0,6.69891081110698,6.59886485138669,5.3325417942284,1.53766979106841,4.60536524160033,1.93024705372329,0,0.154209693802656,1.77561725313127,1.88892458831761,0,1.16210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45006077438183,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0,0.712256285173899,0,0,0,0,1.39453664789186,1.5740617341532,0.6970372701606,0,0,0,0,0,1.116475108079,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,1.47775344708365,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,9.02014804219242,0,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0,1.25336261431701,0,0,0,0,3.20591576906518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,2.23882204330311,9.81595901358343,3.32883516901568,0.947015026375446,2.0125432140206,0.889811221596536,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0.797525143673985,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0.800055529326307,5.49433128292469,7.40848875285022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63210441568205,0,0,1.41070377476274,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,1.98916222116275,0,0.40341013740704,0,0,0,0,0,0,0,0.253663240775627,1.09394961803644,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0,0,2.40083213212386,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0,0,1.16241425368125,0,0,0,0.17071847709395,0,0,0.828324005113957,0.255640214277473,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.6906229103336,1.35941691750254,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0.872701380680755,0,6.69591032700152,0.924351257262837,7.7872781182282,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@KCNK2 | |short_description=p3@KCNK2 | ||
}} | }} |
Latest revision as of 02:22, 25 September 2015
Short description: | p3@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | 23bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.38e-29 | 76 |
skin fibroblast | 4.01e-18 | 23 |
preadipocyte | 1.32e-16 | 12 |
mesenchymal cell | 2.53e-11 | 354 |
connective tissue cell | 7.63e-11 | 361 |
multi fate stem cell | 5.24e-10 | 427 |
motile cell | 7.74e-10 | 386 |
somatic stem cell | 1.14e-09 | 433 |
preadipocyte of the breast | 1.66e-09 | 3 |
stem cell | 3.10e-09 | 441 |
mesenchymal stem cell of adipose | 7.44e-09 | 8 |
omentum preadipocyte | 1.49e-08 | 3 |
receptor cell | 1.91e-08 | 6 |
sensory epithelial cell | 1.91e-08 | 6 |
olfactory epithelial cell | 1.91e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.85e-16 | 41 |
integument | 2.30e-15 | 46 |
integumental system | 2.30e-15 | 46 |
connective tissue | 3.68e-12 | 371 |
omentum | 1.24e-10 | 6 |
peritoneum | 1.24e-10 | 6 |
abdominal cavity | 1.24e-10 | 6 |
visceral peritoneum | 1.24e-10 | 6 |
surface structure | 3.90e-10 | 99 |
cavity lining | 3.86e-07 | 12 |
serous membrane | 3.86e-07 | 12 |
breast | 4.92e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.28e-14 | 5 |
myotonic disease | 1.28e-14 | 5 |
muscle tissue disease | 1.28e-14 | 5 |
myopathy | 1.28e-14 | 5 |
muscular disease | 1.28e-14 | 5 |
myotonic dystrophy | 1.28e-14 | 5 |