FFCP PHASE1:Hg19::chr1:215178875..215178906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3776 | |EntrezGene=3776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |HGNC=6277 | ||
|TSSclassifier=strong | |||
|UniProt=O95069,Q6ZW95 | |UniProt=O95069,Q6ZW95 | ||
|association_with_transcript=0bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |association_with_transcript=0bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | ||
|cluster_id=chr1:215178875..215178906,+ | |||
|coexpression_cluster_id=C633 | |coexpression_cluster_id=C633 | ||
|description=CAGE_peak_2_at_KCNK2_5end | |description=CAGE_peak_2_at_KCNK2_5end | ||
|id=chr1:215178875..215178906,+ | |id=chr1:215178875..215178906,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.57e-26!75;CL:0000055!1.18e-18!180;CL:0002620!8.95e-18!23;CL:0002334!2.38e-10!12;CL:0000048!3.91e-08!430;CL:0002556!1.03e-07!6;CL:0000723!1.14e-07!436;CL:0000034!4.42e-07!444 | |ontology_enrichment_celltype=CL:0000057!3.57e-26!75;CL:0000055!1.18e-18!180;CL:0002620!8.95e-18!23;CL:0002334!2.38e-10!12;CL:0000048!3.91e-08!430;CL:0002556!1.03e-07!6;CL:0000723!1.14e-07!436;CL:0000034!4.42e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.47e-23;23!CL:0002334;3.54e-16;12!CL:0000057;3.26e-11;73!CL:0002580;3.76e-09;3!CL:0000135;5.73e-09;3!CL:0000388;5.73e-09;3!CL:0000346;7.29e-09;3!CL:1000428;7.29e-09;3!CL:0002320;1.11e-08;188!CL:0002570;1.18e-08;8!CL:0002579;2.51e-08;3!CL:0000197;2.93e-08;6!CL:0000098;2.93e-08;6!CL:0002167;2.93e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.34e-34,76;CL:0002620,2.55e-23,23;CL:0002334,4.67e-16,12;CL:0000134,5.50e-12,354;CL:0002320,1.76e-11,361;CL:0000048,1.55e-10,427;CL:0000219,2.12e-10,386;CL:0000723,3.50e-10,433;CL:0000034,9.97e-10,441;CL:0002580,3.24e-09,3;CL:0000135,5.58e-09,3;CL:0000388,5.58e-09,3;CL:0000346,6.92e-09,3;CL:1000428,6.92e-09,3;CL:0002570,1.25e-08,8;CL:0002579,2.72e-08,3;CL:0000197,2.86e-08,6;CL:0000098,2.86e-08,6;CL:0002167,2.86e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.59e-08!5;DOID:450!3.59e-08!5;DOID:66!3.59e-08!5;DOID:423!3.59e-08!5;DOID:0080000!3.59e-08!5;DOID:11722!3.59e-08!5 | |ontology_enrichment_disease=DOID:17!3.59e-08!5;DOID:450!3.59e-08!5;DOID:66!3.59e-08!5;DOID:423!3.59e-08!5;DOID:0080000!3.59e-08!5;DOID:11722!3.59e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.34e-14;5!DOID:450;2.34e-14;5!DOID:66;2.34e-14;5!DOID:423;2.34e-14;5!DOID:0080000;2.34e-14;5!DOID:11722;2.34e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.48e-14,5;DOID:450,2.48e-14,5;DOID:66,2.48e-14,5;DOID:423,2.48e-14,5;DOID:0080000,2.48e-14,5;DOID:11722,2.48e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.64e-18!45;UBERON:0002416!5.64e-18!45;UBERON:0003102!8.29e-18!95;UBERON:0002097!1.05e-16!40;UBERON:0000475!9.80e-13!365;UBERON:0000914!4.19e-08!83;UBERON:0002329!4.19e-08!83;UBERON:0003077!4.19e-08!83;UBERON:0003059!4.19e-08!83;UBERON:0007282!4.19e-08!83;UBERON:0009618!4.19e-08!83;UBERON:0007285!4.19e-08!83;UBERON:0003688!5.98e-08!6;UBERON:0002358!5.98e-08!6;UBERON:0003684!5.98e-08!6;UBERON:0001178!5.98e-08!6;UBERON:0001758!1.03e-07!6;UBERON:0003672!1.03e-07!6;UBERON:0002384!5.48e-07!375 | |ontology_enrichment_uberon=UBERON:0002199!5.64e-18!45;UBERON:0002416!5.64e-18!45;UBERON:0003102!8.29e-18!95;UBERON:0002097!1.05e-16!40;UBERON:0000475!9.80e-13!365;UBERON:0000914!4.19e-08!83;UBERON:0002329!4.19e-08!83;UBERON:0003077!4.19e-08!83;UBERON:0003059!4.19e-08!83;UBERON:0007282!4.19e-08!83;UBERON:0009618!4.19e-08!83;UBERON:0007285!4.19e-08!83;UBERON:0003688!5.98e-08!6;UBERON:0002358!5.98e-08!6;UBERON:0003684!5.98e-08!6;UBERON:0001178!5.98e-08!6;UBERON:0001758!1.03e-07!6;UBERON:0003672!1.03e-07!6;UBERON:0002384!5.48e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.11e-15;41!UBERON:0002199;2.04e-13;46!UBERON:0002416;2.04e-13;46!UBERON:0003102;1.47e-10;50!UBERON:0003688;2.98e-10;6!UBERON:0002358;2.98e-10;6!UBERON:0003684;2.98e-10;6!UBERON:0001178;2.98e-10;6!UBERON:0007846;5.73e-09;3!UBERON:0000043;5.73e-09;3!UBERON:0007845;5.73e-09;3!UBERON:0000412;7.29e-09;3!UBERON:0001992;7.29e-09;3!UBERON:0002384;1.36e-07;198!UBERON:0000310;8.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.99e-20,46;UBERON:0002416,1.99e-20,46;UBERON:0002097,3.08e-19,41;UBERON:0003102,1.03e-12,99;UBERON:0002384,4.34e-12,371;UBERON:0003688,3.59e-10,6;UBERON:0002358,3.59e-10,6;UBERON:0003684,3.59e-10,6;UBERON:0001178,3.59e-10,6;UBERON:0007846,5.58e-09,3;UBERON:0000043,5.58e-09,3;UBERON:0007845,5.58e-09,3;UBERON:0000412,6.92e-09,3;UBERON:0001992,6.92e-09,3;UBERON:0000310,8.17e-07,10 | |||
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| ||
|short_description=p2@KCNK2 | |short_description=p2@KCNK2 | ||
}} | }} |
Latest revision as of 02:22, 25 September 2015
Short description: | p2@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | 0bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.34e-34 | 76 |
skin fibroblast | 2.55e-23 | 23 |
preadipocyte | 4.67e-16 | 12 |
mesenchymal cell | 5.50e-12 | 354 |
connective tissue cell | 1.76e-11 | 361 |
multi fate stem cell | 1.55e-10 | 427 |
motile cell | 2.12e-10 | 386 |
somatic stem cell | 3.50e-10 | 433 |
stem cell | 9.97e-10 | 441 |
preadipocyte of the breast | 3.24e-09 | 3 |
fibrocyte | 5.58e-09 | 3 |
tendon cell | 5.58e-09 | 3 |
hair follicle dermal papilla cell | 6.92e-09 | 3 |
stem cell of epidermis | 6.92e-09 | 3 |
mesenchymal stem cell of adipose | 1.25e-08 | 8 |
omentum preadipocyte | 2.72e-08 | 3 |
receptor cell | 2.86e-08 | 6 |
sensory epithelial cell | 2.86e-08 | 6 |
olfactory epithelial cell | 2.86e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 1.99e-20 | 46 |
integumental system | 1.99e-20 | 46 |
skin of body | 3.08e-19 | 41 |
surface structure | 1.03e-12 | 99 |
connective tissue | 4.34e-12 | 371 |
omentum | 3.59e-10 | 6 |
peritoneum | 3.59e-10 | 6 |
abdominal cavity | 3.59e-10 | 6 |
visceral peritoneum | 3.59e-10 | 6 |
dense regular connective tissue | 5.58e-09 | 3 |
tendon | 5.58e-09 | 3 |
regular connective tissue | 5.58e-09 | 3 |
dermal papilla | 6.92e-09 | 3 |
papillary layer of dermis | 6.92e-09 | 3 |
breast | 8.17e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.48e-14 | 5 |
myotonic disease | 2.48e-14 | 5 |
muscle tissue disease | 2.48e-14 | 5 |
myopathy | 2.48e-14 | 5 |
muscular disease | 2.48e-14 | 5 |
myotonic dystrophy | 2.48e-14 | 5 |