FFCP PHASE1:Hg19::chr19:929027..929051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1820 | |EntrezGene=1820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3031 | |HGNC=3031 | ||
|TSSclassifier=strong | |||
|UniProt=Q99856 | |UniProt=Q99856 | ||
|association_with_transcript=-277bp_to_AY152547,U88047_5end | |association_with_transcript=-277bp_to_AY152547,U88047_5end | ||
|cluster_id=chr19:929027..929051,+ | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_4_at_ARID3A_5end | |description=CAGE_peak_4_at_ARID3A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!3.68e-20!7;CL:0000586!3.68e-20!7;CL:0002541!3.97e-13!3 | |ontology_enrichment_celltype=CL:0000039!3.68e-20!7;CL:0000586!3.68e-20!7;CL:0002541!3.97e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.26e-38;3!CL:0000039;7.53e-17;7!CL:0000586;7.53e-17;7!CL:0000349;7.63e-11;19 | |ontology_enrichment_celltype_v019=CL:0002541;3.26e-38;3!CL:0000039;7.53e-17;7!CL:0000586;7.53e-17;7!CL:0000349;7.63e-11;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.06e-38,3;CL:0000039,6.76e-17,7;CL:0000586,6.76e-17,7;CL:0000349,7.63e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.85e-14;1!UBERON:0000358;1.18e-13;1 | |ontology_enrichment_development_v019=UBERON:0003124;5.85e-14;1!UBERON:0000358;1.18e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;4.25e-14;1!DOID:10165;4.25e-14;1!DOID:1798;4.25e-14;1 | |ontology_enrichment_disease_v019=DOID:1799;4.25e-14;1!DOID:10165;4.25e-14;1!DOID:1798;4.25e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,4.53e-14,1;DOID:10165,4.53e-14,1;DOID:1798,4.53e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.26e-17!14;UBERON:0000158!4.26e-17!14;UBERON:0003124!1.63e-14!7;UBERON:0000476!3.97e-13!3;UBERON:0000920!3.97e-13!3;UBERON:0000473!3.76e-12!8;UBERON:0000478!6.72e-12!24;UBERON:0003135!9.64e-09!11 | |ontology_enrichment_uberon=UBERON:0005631!4.26e-17!14;UBERON:0000158!4.26e-17!14;UBERON:0003124!1.63e-14!7;UBERON:0000476!3.97e-13!3;UBERON:0000920!3.97e-13!3;UBERON:0000473!3.76e-12!8;UBERON:0000478!6.72e-12!24;UBERON:0003135!9.64e-09!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.26e-38;3!UBERON:0000920;3.26e-38;3!UBERON:0005631;2.42e-20;10!UBERON:0000158;2.42e-20;10!UBERON:0000478;1.93e-18;24!UBERON:0000473;4.02e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0003124;3.26e-38;3!UBERON:0000920;3.26e-38;3!UBERON:0005631;2.42e-20;10!UBERON:0000158;2.42e-20;10!UBERON:0000478;1.93e-18;24!UBERON:0000473;4.02e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.06e-38,3;UBERON:0003124,5.50e-29,7;UBERON:0005631,2.31e-22,14;UBERON:0000158,2.31e-22,14;UBERON:0000478,1.96e-18,24;UBERON:0000473,4.15e-07,8 | |||
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| ||
|short_description=p4@ARID3A | |short_description=p4@ARID3A | ||
}} | }} |
Latest revision as of 01:52, 25 September 2015
Short description: | p4@ARID3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARID3A_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -277bp_to_AY152547, U88047_5end |
EntrezGene: | ARID3A |
HGNC: | 3031 |
UniProt: | Q99856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.06e-38 | 3 |
germ line cell | 6.76e-17 | 7 |
germ cell | 6.76e-17 | 7 |
extraembryonic cell | 7.63e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.06e-38 | 3 |
chorion | 5.50e-29 | 7 |
extraembryonic membrane | 2.31e-22 | 14 |
membranous layer | 2.31e-22 | 14 |
extraembryonic structure | 1.96e-18 | 24 |
testis | 4.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.53e-14 | 1 |
endocrine pancreas cancer | 4.53e-14 | 1 |
pancreatic endocrine carcinoma | 4.53e-14 | 1 |