FFCP PHASE1:Hg19::chr8:10588010..10588030,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:10588010..10588030,- to FFCP PHASE1:Hg19::chr8:10588010..10588030,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83595 | |EntrezGene=83595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18196 | |HGNC=18196 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT81 | |UniProt=Q9BT81 | ||
|association_with_transcript=0bp_to_ENST00000304501,NM_031439,uc003wtf.2_5end | |||
|cluster_id=chr8:10588010..10588030,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_SOX7_5end | |||
|id=chr8:10588010..10588030,- | |||
|ontology_enrichment_celltype=CL:0002139!6.86e-20!24;CL:0000066!1.32e-18!254;CL:0000115!9.83e-18!35;CL:0000071!1.57e-15!18;CL:0002546!1.57e-15!18;CL:0000076!2.88e-14!62;CL:0002078!3.92e-12!44;CL:0000213!3.18e-09!57;CL:0000215!3.18e-09!57;CL:0002076!6.13e-09!43;CL:1000413!1.82e-08!9;CL:0000223!2.31e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.84e-23;24!CL:0000115;1.01e-18;36!CL:0000071;6.14e-18;18!CL:0002078;9.74e-10;45!CL:1000413;1.17e-09;9!CL:0000076;1.45e-08;63!CL:0000213;4.80e-08;58!CL:0000215;4.80e-08;58!CL:0002543;4.39e-07;6!CL:0002544;6.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.74e-23,24;CL:0000115,3.49e-22,36;CL:0000071,6.17e-18,18;CL:0002546,6.17e-18,18;CL:0000076,2.68e-15,63;CL:0002078,6.67e-15,45;CL:0000066,2.23e-14,253;CL:0000213,1.54e-11,58;CL:0000215,1.54e-11,58;CL:1000413,1.18e-09,9;CL:0002076,2.96e-08,42;CL:0000223,1.31e-07,58;CL:0002543,4.42e-07,6;CL:0002544,6.20e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.14e-18;18 | |||
|ontology_enrichment_disease=DOID:1749!2.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.16e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-26!115;UBERON:0004111!9.00e-26!241;UBERON:0000477!2.08e-23!286;UBERON:0000119!8.09e-19!312;UBERON:0000483!1.54e-18!309;UBERON:0000025!7.65e-17!194;UBERON:0001986!1.57e-15!18;UBERON:0004638!1.57e-15!18;UBERON:0004852!1.57e-15!18;UBERON:0000467!3.62e-15!625;UBERON:0000480!5.49e-15!626;UBERON:0000153!3.00e-14!129;UBERON:0007811!3.00e-14!129;UBERON:0000468!4.30e-14!659;UBERON:0000033!1.00e-13!123;UBERON:0003075!2.49e-13!86;UBERON:0007284!2.49e-13!86;UBERON:0000064!3.45e-13!219;UBERON:0000487!7.69e-13!22;UBERON:0000922!8.36e-13!612;UBERON:0004121!1.11e-12!169;UBERON:0000481!1.63e-12!347;UBERON:0004119!3.39e-12!169;UBERON:0000925!3.39e-12!169;UBERON:0006595!3.39e-12!169;UBERON:0002346!4.07e-12!90;UBERON:0000924!6.39e-12!173;UBERON:0006601!6.39e-12!173;UBERON:0002050!1.19e-11!605;UBERON:0005423!1.19e-11!605;UBERON:0001049!1.29e-11!57;UBERON:0005068!1.29e-11!57;UBERON:0006241!1.29e-11!57;UBERON:0007135!1.29e-11!57;UBERON:0000923!2.48e-11!604;UBERON:0005291!2.48e-11!604;UBERON:0006598!2.48e-11!604;UBERON:0002532!2.48e-11!604;UBERON:0003056!5.60e-11!61;UBERON:0006914!9.32e-11!25;UBERON:0005743!2.24e-10!86;UBERON:0001007!6.79e-10!155;UBERON:0001555!6.79e-10!155;UBERON:0007026!6.79e-10!155;UBERON:0000062!7.64e-10!511;UBERON:0003080!8.19e-10!42;UBERON:0001017!9.73e-10!82;UBERON:0002616!1.38e-09!59;UBERON:0004921!2.05e-09!129;UBERON:0004185!2.05e-09!129;UBERON:0002780!2.05e-09!41;UBERON:0001890!2.05e-09!41;UBERON:0006240!2.05e-09!41;UBERON:0000955!3.26e-09!69;UBERON:0006238!3.26e-09!69;UBERON:0001004!4.39e-09!72;UBERON:0000073!7.41e-09!94;UBERON:0001016!7.41e-09!94;UBERON:0003915!1.82e-08!9;UBERON:0004700!1.82e-08!9;UBERON:0001917!1.82e-08!9;UBERON:0000475!3.43e-08!365;UBERON:0002020!1.38e-07!34;UBERON:0003528!1.38e-07!34;UBERON:0001048!1.53e-07!168;UBERON:0001893!1.66e-07!34;UBERON:0001041!2.31e-07!98;UBERON:0002791!3.01e-07!33;UBERON:0001869!5.58e-07!32;UBERON:0000077!5.82e-07!130;UBERON:0002619!7.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.14e-18;18!UBERON:0001986;6.14e-18;18!UBERON:0004852;6.14e-18;18!UBERON:0000487;3.07e-14;22!UBERON:0006914;1.61e-11;25!UBERON:0000490;3.10e-11;33!UBERON:0003915;1.17e-09;9!UBERON:0004700;1.17e-09;9!UBERON:0001917;1.17e-09;9!UBERON:0007023;1.75e-08;114!UBERON:0002780;5.19e-08;41!UBERON:0001890;5.19e-08;41!UBERON:0002619;4.28e-07;22!UBERON:0001893;4.37e-07;34!UBERON:0003528;4.57e-07;34!UBERON:0002020;4.57e-07;34!UBERON:0002791;6.62e-07;32!UBERON:0001869;6.94e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.37e-30,114;UBERON:0004111,7.81e-25,240;UBERON:0004638,6.17e-18,18;UBERON:0001986,6.17e-18,18;UBERON:0004852,6.17e-18,18;UBERON:0000025,6.28e-16,192;UBERON:0000483,2.95e-15,306;UBERON:0000119,1.06e-14,309;UBERON:0000487,3.24e-14,22;UBERON:0010371,1.41e-12,104;UBERON:0011216,1.67e-12,223;UBERON:0006914,1.68e-11,25;UBERON:0001049,2.22e-11,56;UBERON:0005068,2.22e-11,56;UBERON:0006241,2.22e-11,56;UBERON:0007135,2.22e-11,56;UBERON:0003075,2.48e-11,82;UBERON:0007284,2.48e-11,82;UBERON:0010314,7.61e-11,132;UBERON:0000073,1.44e-10,53;UBERON:0002616,1.44e-10,53;UBERON:0002780,1.85e-10,41;UBERON:0001890,1.85e-10,41;UBERON:0003080,1.85e-10,41;UBERON:0006240,1.85e-10,41;UBERON:0002346,4.50e-10,86;UBERON:0000922,8.98e-10,592;UBERON:0004119,1.05e-09,160;UBERON:0000925,1.05e-09,160;UBERON:0006595,1.05e-09,160;UBERON:0003915,1.18e-09,9;UBERON:0004700,1.18e-09,9;UBERON:0001917,1.18e-09,9;UBERON:0003056,1.49e-09,61;UBERON:0004121,1.80e-09,171;UBERON:0000924,1.80e-09,171;UBERON:0006601,1.80e-09,171;UBERON:0002050,4.96e-09,564;UBERON:0000955,1.86e-08,68;UBERON:0006238,1.86e-08,68;UBERON:0003528,2.48e-08,34;UBERON:0002020,2.48e-08,34;UBERON:0001893,3.08e-08,34;UBERON:0005423,3.98e-08,581;UBERON:0001017,5.83e-08,81;UBERON:0001007,5.95e-08,145;UBERON:0001555,5.95e-08,145;UBERON:0007026,5.95e-08,145;UBERON:0000923,6.87e-08,560;UBERON:0010316,6.87e-08,560;UBERON:0005291,6.87e-08,560;UBERON:0006598,6.87e-08,560;UBERON:0010317,6.87e-08,560;UBERON:0002532,6.87e-08,560;UBERON:0002791,1.22e-07,32;UBERON:0001869,1.25e-07,32;UBERON:0004921,4.32e-07,118;UBERON:0002619,4.44e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,20.2272669385364,25.9037090149295,25.5130267015083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.71911117614727,3.83587685530591,0,0,0,0,0,0.472674085820339,1.99556457716308,1.75669571386252,25.2789615710585,46.9940921897379,32.6290309650298,0,0,0,0,0,0,67.1816936899463,50.7538411112613,126.706283086772,66.1410292051091,95.2263720196486,102.343911601705,66.6693943252426,51.4249350746964,38.7785226328514,61.5885927486993,201.414658554573,67.6642174089476,147.169420701546,129.417404281746,84.254762579703,86.4421369789892,103.73257015329,116.215047858789,70.5256532343063,85.4339093611316,94.7153016120206,0,0,22.6768907114118,0,0,0,0,0.709336764396714,0,2.1349799145941,0.24666754841716,0.933633106199299,9.96858973315692,2.94231425604226,0.302714855289863,0,0,0,6.84566185853339,0,0,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0,0,0,0,0,0,0.907457465280168,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7106485490886,51.0035245504861,54.4928731239107,0.243947412259191,0,2.32387885739037,1.14027160516907,1.26160425437814,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.110293972732394,0.653638332277218,0,0.134831308160164,0,0.38474715694639,116.628561830694,53.2918740453094,0.8231480226628,0,0,2.94848165003288,6.49868897349544,0,0.491953754172454,4.11762744716461,17.3405450945628,13.4882103909143,10.2539551859863,21.2027539413033,0,0,51.9592831290984,0.231860809950154,0.587043471179108,88.6409989252993,92.5971025153221,61.8325994762444,0,0,0,0,0,16.8720901176199,11.4227847175224,66.4925206066792,0.626909658919938,4.65014301622339,11.8848630541215,0,0,1.24396869324463,0.720599767084807,0.6312121671319,0,0,0,1.71072446022705,0,0,0,0.336393253036082,0.43596006883328,0.2933531432838,0,3.57656445851882,2.535908257668,0,0,0,0,0,0,0,0,4.23457039581856,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,3.90419561572865,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,12.4314011588037,21.5469514109997,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,104.634713345225,78.9234792483033,29.7963964220952,183.530430701444,0,0,0.509752546090077,0,0,0,0,0.769350375349168,0.656029291399411,0.650756789328606,30.0879754011349,0,0,53.406695033644,13.6512651667669,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,15.371497128571,19.7955769386059,19.7799704366605,14.4655626623436,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,26.4610809995158,32.1745092257178,42.4674840959158,30.3143038501229,28.4133545963012,18.5318623234388,34.5875519758607,10.3375530093132,0,0,0,0,0,0,0,0,0,0,49.0080431962063,0,32.6048421326765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.4038648739918,0,0,2.27308917445131,29.1268271379982,0.593929361665277,2.45728561679386,3.97659059106519,8.29949556822025,1.78093928036649,0,0,11.1578873420599,8.01223355040328,0,0,0,0,17.0749867179921,9.30910108313168,0,14.5992240342662,0,0,3.87733098438087,5.19501349706367,0,0,0,15.2249910841307,24.9207651745244,0,0,1.37897349296586,0.291604613383254,0,4.42870692906919,6.51220768577203,0,4.64432891711143,0.295547618953547,3.29078095730959,0,15.3366118706464,19.4684154014607,0,0,0,1.4124158349861,8.61303131276183,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,1.99052386215701,7.34197785377715,12.8316330436061,0,0,0,4.92028270758942,28.0902176554576,1.1713222286267,0.182454789215666,28.9583636019493,0,2.36750641709634,9.67925728389311,3.97894590119637,8.27744193133192,1.50323419414493,0.414752765588989,1.99396161812156,3.97190347050599,1.88359751044335,17.9208644659438,0,0,0,92.3088383643437,39.9601758204048,13.8034067911204,0,6.38591786507962,7.52819965987711,9.93597030343832,37.8257164304836,0,11.7509985205877,0.274083849293502,0.19871461170299,3.92526934926448,0,0,8.75157278431345,4.19600180122473,0,0,0,4.03353434366819,0.621262677827163,43.1320083348736,0,0,0.203996435272644,0,7.20504346451747,7.8036065968436,0,0,0,49.432985025189,31.853298937624,61.0192070890292,22.763406056885,28.7581452251502,27.6732607227922,40.3100834920358,0,3.49487848582361,0,0,0,0.295282444544246,0,4.77137813885582,6.94637371169036,0.482259445395058,0,0.415440338029185,0,0.77380195455795,2.67298049295309,8.72130187758092,5.83162234014067,11.6449185659696,0,1.97216073266129,0.575745591958336,29.30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| ||
|short_description=p1@SOX7 | |||
}} | }} |
Latest revision as of 01:39, 25 September 2015
Short description: | p1@SOX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX7_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000304501, NM_031439, uc003wtf.2_5end |
EntrezGene: | SOX7 |
HGNC: | 18196 |
UniProt: | Q9BT81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.74e-23 | 24 |
endothelial cell | 3.49e-22 | 36 |
blood vessel endothelial cell | 6.17e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.17e-18 | 18 |
squamous epithelial cell | 2.68e-15 | 63 |
meso-epithelial cell | 6.67e-15 | 45 |
epithelial cell | 2.23e-14 | 253 |
lining cell | 1.54e-11 | 58 |
barrier cell | 1.54e-11 | 58 |
endothelial cell of artery | 1.18e-09 | 9 |
endo-epithelial cell | 2.96e-08 | 42 |
endodermal cell | 1.31e-07 | 58 |
vein endothelial cell | 4.42e-07 | 6 |
aortic endothelial cell | 6.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.16e-07 | 14 |