FFCP PHASE1:Hg19::chr8:10588010..10588030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83595 | |EntrezGene=83595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18196 | |HGNC=18196 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT81 | |UniProt=Q9BT81 | ||
|association_with_transcript=0bp_to_ENST00000304501,NM_031439,uc003wtf.2_5end | |association_with_transcript=0bp_to_ENST00000304501,NM_031439,uc003wtf.2_5end | ||
|cluster_id=chr8:10588010..10588030,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_SOX7_5end | |description=CAGE_peak_1_at_SOX7_5end | ||
|id=chr8:10588010..10588030,- | |id=chr8:10588010..10588030,- | ||
|ontology_enrichment_celltype=CL:0002139!6.86e-20!24;CL:0000066!1.32e-18!254;CL:0000115!9.83e-18!35;CL:0000071!1.57e-15!18;CL:0002546!1.57e-15!18;CL:0000076!2.88e-14!62;CL:0002078!3.92e-12!44;CL:0000213!3.18e-09!57;CL:0000215!3.18e-09!57;CL:0002076!6.13e-09!43;CL:1000413!1.82e-08!9;CL:0000223!2.31e-08!59 | |ontology_enrichment_celltype=CL:0002139!6.86e-20!24;CL:0000066!1.32e-18!254;CL:0000115!9.83e-18!35;CL:0000071!1.57e-15!18;CL:0002546!1.57e-15!18;CL:0000076!2.88e-14!62;CL:0002078!3.92e-12!44;CL:0000213!3.18e-09!57;CL:0000215!3.18e-09!57;CL:0002076!6.13e-09!43;CL:1000413!1.82e-08!9;CL:0000223!2.31e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.84e-23;24!CL:0000115;1.01e-18;36!CL:0000071;6.14e-18;18!CL:0002078;9.74e-10;45!CL:1000413;1.17e-09;9!CL:0000076;1.45e-08;63!CL:0000213;4.80e-08;58!CL:0000215;4.80e-08;58!CL:0002543;4.39e-07;6!CL:0002544;6.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.74e-23,24;CL:0000115,3.49e-22,36;CL:0000071,6.17e-18,18;CL:0002546,6.17e-18,18;CL:0000076,2.68e-15,63;CL:0002078,6.67e-15,45;CL:0000066,2.23e-14,253;CL:0000213,1.54e-11,58;CL:0000215,1.54e-11,58;CL:1000413,1.18e-09,9;CL:0002076,2.96e-08,42;CL:0000223,1.31e-07,58;CL:0002543,4.42e-07,6;CL:0002544,6.20e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.14e-18;18 | |||
|ontology_enrichment_disease=DOID:1749!2.47e-07!14 | |ontology_enrichment_disease=DOID:1749!2.47e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.16e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-26!115;UBERON:0004111!9.00e-26!241;UBERON:0000477!2.08e-23!286;UBERON:0000119!8.09e-19!312;UBERON:0000483!1.54e-18!309;UBERON:0000025!7.65e-17!194;UBERON:0001986!1.57e-15!18;UBERON:0004638!1.57e-15!18;UBERON:0004852!1.57e-15!18;UBERON:0000467!3.62e-15!625;UBERON:0000480!5.49e-15!626;UBERON:0000153!3.00e-14!129;UBERON:0007811!3.00e-14!129;UBERON:0000468!4.30e-14!659;UBERON:0000033!1.00e-13!123;UBERON:0003075!2.49e-13!86;UBERON:0007284!2.49e-13!86;UBERON:0000064!3.45e-13!219;UBERON:0000487!7.69e-13!22;UBERON:0000922!8.36e-13!612;UBERON:0004121!1.11e-12!169;UBERON:0000481!1.63e-12!347;UBERON:0004119!3.39e-12!169;UBERON:0000925!3.39e-12!169;UBERON:0006595!3.39e-12!169;UBERON:0002346!4.07e-12!90;UBERON:0000924!6.39e-12!173;UBERON:0006601!6.39e-12!173;UBERON:0002050!1.19e-11!605;UBERON:0005423!1.19e-11!605;UBERON:0001049!1.29e-11!57;UBERON:0005068!1.29e-11!57;UBERON:0006241!1.29e-11!57;UBERON:0007135!1.29e-11!57;UBERON:0000923!2.48e-11!604;UBERON:0005291!2.48e-11!604;UBERON:0006598!2.48e-11!604;UBERON:0002532!2.48e-11!604;UBERON:0003056!5.60e-11!61;UBERON:0006914!9.32e-11!25;UBERON:0005743!2.24e-10!86;UBERON:0001007!6.79e-10!155;UBERON:0001555!6.79e-10!155;UBERON:0007026!6.79e-10!155;UBERON:0000062!7.64e-10!511;UBERON:0003080!8.19e-10!42;UBERON:0001017!9.73e-10!82;UBERON:0002616!1.38e-09!59;UBERON:0004921!2.05e-09!129;UBERON:0004185!2.05e-09!129;UBERON:0002780!2.05e-09!41;UBERON:0001890!2.05e-09!41;UBERON:0006240!2.05e-09!41;UBERON:0000955!3.26e-09!69;UBERON:0006238!3.26e-09!69;UBERON:0001004!4.39e-09!72;UBERON:0000073!7.41e-09!94;UBERON:0001016!7.41e-09!94;UBERON:0003915!1.82e-08!9;UBERON:0004700!1.82e-08!9;UBERON:0001917!1.82e-08!9;UBERON:0000475!3.43e-08!365;UBERON:0002020!1.38e-07!34;UBERON:0003528!1.38e-07!34;UBERON:0001048!1.53e-07!168;UBERON:0001893!1.66e-07!34;UBERON:0001041!2.31e-07!98;UBERON:0002791!3.01e-07!33;UBERON:0001869!5.58e-07!32;UBERON:0000077!5.82e-07!130;UBERON:0002619!7.99e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!3.25e-26!115;UBERON:0004111!9.00e-26!241;UBERON:0000477!2.08e-23!286;UBERON:0000119!8.09e-19!312;UBERON:0000483!1.54e-18!309;UBERON:0000025!7.65e-17!194;UBERON:0001986!1.57e-15!18;UBERON:0004638!1.57e-15!18;UBERON:0004852!1.57e-15!18;UBERON:0000467!3.62e-15!625;UBERON:0000480!5.49e-15!626;UBERON:0000153!3.00e-14!129;UBERON:0007811!3.00e-14!129;UBERON:0000468!4.30e-14!659;UBERON:0000033!1.00e-13!123;UBERON:0003075!2.49e-13!86;UBERON:0007284!2.49e-13!86;UBERON:0000064!3.45e-13!219;UBERON:0000487!7.69e-13!22;UBERON:0000922!8.36e-13!612;UBERON:0004121!1.11e-12!169;UBERON:0000481!1.63e-12!347;UBERON:0004119!3.39e-12!169;UBERON:0000925!3.39e-12!169;UBERON:0006595!3.39e-12!169;UBERON:0002346!4.07e-12!90;UBERON:0000924!6.39e-12!173;UBERON:0006601!6.39e-12!173;UBERON:0002050!1.19e-11!605;UBERON:0005423!1.19e-11!605;UBERON:0001049!1.29e-11!57;UBERON:0005068!1.29e-11!57;UBERON:0006241!1.29e-11!57;UBERON:0007135!1.29e-11!57;UBERON:0000923!2.48e-11!604;UBERON:0005291!2.48e-11!604;UBERON:0006598!2.48e-11!604;UBERON:0002532!2.48e-11!604;UBERON:0003056!5.60e-11!61;UBERON:0006914!9.32e-11!25;UBERON:0005743!2.24e-10!86;UBERON:0001007!6.79e-10!155;UBERON:0001555!6.79e-10!155;UBERON:0007026!6.79e-10!155;UBERON:0000062!7.64e-10!511;UBERON:0003080!8.19e-10!42;UBERON:0001017!9.73e-10!82;UBERON:0002616!1.38e-09!59;UBERON:0004921!2.05e-09!129;UBERON:0004185!2.05e-09!129;UBERON:0002780!2.05e-09!41;UBERON:0001890!2.05e-09!41;UBERON:0006240!2.05e-09!41;UBERON:0000955!3.26e-09!69;UBERON:0006238!3.26e-09!69;UBERON:0001004!4.39e-09!72;UBERON:0000073!7.41e-09!94;UBERON:0001016!7.41e-09!94;UBERON:0003915!1.82e-08!9;UBERON:0004700!1.82e-08!9;UBERON:0001917!1.82e-08!9;UBERON:0000475!3.43e-08!365;UBERON:0002020!1.38e-07!34;UBERON:0003528!1.38e-07!34;UBERON:0001048!1.53e-07!168;UBERON:0001893!1.66e-07!34;UBERON:0001041!2.31e-07!98;UBERON:0002791!3.01e-07!33;UBERON:0001869!5.58e-07!32;UBERON:0000077!5.82e-07!130;UBERON:0002619!7.99e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.14e-18;18!UBERON:0001986;6.14e-18;18!UBERON:0004852;6.14e-18;18!UBERON:0000487;3.07e-14;22!UBERON:0006914;1.61e-11;25!UBERON:0000490;3.10e-11;33!UBERON:0003915;1.17e-09;9!UBERON:0004700;1.17e-09;9!UBERON:0001917;1.17e-09;9!UBERON:0007023;1.75e-08;114!UBERON:0002780;5.19e-08;41!UBERON:0001890;5.19e-08;41!UBERON:0002619;4.28e-07;22!UBERON:0001893;4.37e-07;34!UBERON:0003528;4.57e-07;34!UBERON:0002020;4.57e-07;34!UBERON:0002791;6.62e-07;32!UBERON:0001869;6.94e-07;32 | |||
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| ||
|short_description=p1@SOX7 | |short_description=p1@SOX7 | ||
}} | }} |
Latest revision as of 01:39, 25 September 2015
Short description: | p1@SOX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX7_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000304501, NM_031439, uc003wtf.2_5end |
EntrezGene: | SOX7 |
HGNC: | 18196 |
UniProt: | Q9BT81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.74e-23 | 24 |
endothelial cell | 3.49e-22 | 36 |
blood vessel endothelial cell | 6.17e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.17e-18 | 18 |
squamous epithelial cell | 2.68e-15 | 63 |
meso-epithelial cell | 6.67e-15 | 45 |
epithelial cell | 2.23e-14 | 253 |
lining cell | 1.54e-11 | 58 |
barrier cell | 1.54e-11 | 58 |
endothelial cell of artery | 1.18e-09 | 9 |
endo-epithelial cell | 2.96e-08 | 42 |
endodermal cell | 1.31e-07 | 58 |
vein endothelial cell | 4.42e-07 | 6 |
aortic endothelial cell | 6.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.16e-07 | 14 |