FFCP PHASE1:Hg19::chr2:224866441..224866450,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8951 | |||
|TSSclassifier=strong | |||
|UniProt=P07093 | |||
|association_with_transcript=166bp_to_M17783_5end | |||
|cluster_id=chr2:224866441..224866450,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_21_at_SERPINE2_5end | |||
|id=chr2:224866441..224866450,- | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-16!180;CL:0000057!6.85e-16!75;CL:0002620!3.55e-12!23 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.20e-14;3!CL:0000388;4.20e-14;3!CL:0002541;1.01e-13;3!CL:0002579;1.80e-13;3!CL:0002595;2.12e-13;5!CL:0000153;2.07e-11;9!CL:0000447;2.07e-11;9!CL:0000569;1.64e-09;4!CL:0002593;3.24e-09;2!CL:0002334;1.10e-08;12!CL:0000499;1.69e-08;28!CL:0000138;8.93e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,4.41e-14,3;CL:0000388,4.41e-14,3;CL:0002579,1.29e-13,3;CL:0002541,1.59e-13,3;CL:0002595,2.20e-13,5;CL:0000057,7.93e-12,76;CL:0000153,1.44e-11,9;CL:0000447,1.44e-11,9;CL:0000569,2.15e-09,4;CL:0000011,2.15e-09,4;CL:0002593,2.64e-09,2;CL:0002334,9.97e-09,12;CL:0000499,1.44e-08,28;CL:0000048,3.61e-08,427;CL:0000723,6.25e-08,433;CL:0000034,1.27e-07,441;CL:0000058,7.61e-07,6;CL:0000138,7.61e-07,6;CL:0000327,8.18e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000011;1.64e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.42e-13;3!DOID:127;1.42e-13;3!DOID:0060072;2.72e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.13e-13,3;DOID:127,1.13e-13,3;DOID:0060072,2.29e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.94e-11!40;UBERON:0002199!5.67e-09!45;UBERON:0002416!5.67e-09!45;UBERON:0003102!1.03e-08!95;UBERON:0003688!1.28e-07!6;UBERON:0002358!1.28e-07!6;UBERON:0003684!1.28e-07!6;UBERON:0001178!1.28e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.02e-16;9!UBERON:0000042;3.02e-16;9!UBERON:0007846;4.20e-14;3!UBERON:0000043;4.20e-14;3!UBERON:0007845;4.20e-14;3!UBERON:0003124;1.01e-13;3!UBERON:0000920;1.01e-13;3!UBERON:0003834;2.12e-13;5!UBERON:0001533;2.12e-13;5!UBERON:0003688;2.09e-11;6!UBERON:0002358;2.09e-11;6!UBERON:0003684;2.09e-11;6!UBERON:0001178;2.09e-11;6!UBERON:0005406;3.65e-10;2!UBERON:0003513;1.35e-09;7!UBERON:0002456;3.24e-09;2!UBERON:0005631;5.94e-07;10!UBERON:0000158;5.94e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.41e-14,3;UBERON:0000043,4.41e-14,3;UBERON:0007845,4.41e-14,3;UBERON:0000920,1.59e-13,3;UBERON:0003834,2.20e-13,5;UBERON:0001533,2.20e-13,5;UBERON:0004457,4.59e-12,12;UBERON:0000042,4.59e-12,12;UBERON:0003688,2.34e-11,6;UBERON:0002358,2.34e-11,6;UBERON:0003684,2.34e-11,6;UBERON:0001178,2.34e-11,6;UBERON:0005406,3.51e-10,2;UBERON:0003513,1.38e-09,7;UBERON:0002456,2.64e-09,2;UBERON:0004923,8.28e-08,66 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,1.0007329835313,0.446961094427288,7.85104671690332,0,0,0,0,0,0,0.263766978228454,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,1.5905718941022,7.29952305453954,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.64619665163954,0.264818361626438,3.44203944898576,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,1.04614076386261,0,0,0.421352420106746,0,0,0,0,0.989067717114227,0,1.43723628363248,0,0,0,0,0.919463387397059,0.600952235626387,0.113432183160021,0.538168907066586,0.640672166455702,0.423863802319124,1.80054657650641,0.618315175430633,1.54584324027377,1.11670113798954,0.506328996723799,0.974370051611986,0,0.552299391853796,0.323292113637624,1.42003837006646,0.403008392910561,0.169560592310488,0.773043412653187,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.514137463516618,0.901029173531752,0,0,0,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31650090668127,2.4657158706046,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0.713715955188647,0,0.117141414992713,0,0,0,0,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,1.40330047216537,1.79394808957981,3.07024349440022,4.3430558708774,7.42090332224955,0,0,0,0,0.232420756919918,0,1.20303882181971,0.0920809889358963,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,4.82051789532479,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,3.1481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0.404364963146632,0,0.842516912477962,0,1.70599442741899,2.11300293513511,0.409499734223957,0.707027159768564,2.26016233240486,0,1.32687795048244,2.19225442626881,0,0,0,0.6196469961995,0.563391205064483,0,0.0982490410131212,0,0,3.58882980006029,1.64647446479951,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,5.42301971544263,1.00757352742049,14.3919389525031,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,2.71499800876856,2.5926644736038,3.91904832131291,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0.757612021100357,0.50313580350515,0,1.14420034198462,0,1.24349760466224,1.47855149989634,0.159296767163702,0.449803112163605,0,2.90294345488599,1.06336685823198,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,3.34795516350076,6.47045880083986,5.19151874548547,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0,0,0.267964130156178,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p21@SERPINE2 | |||
}} |
Latest revision as of 01:12, 25 September 2015
Short description: | p21@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 166bp_to_M17783_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | P07093 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 4.41e-14 | 3 |
tendon cell | 4.41e-14 | 3 |
omentum preadipocyte | 1.29e-13 | 3 |
chorionic membrane mesenchymal stem cell | 1.59e-13 | 3 |
smooth muscle cell of the subclavian artery | 2.20e-13 | 5 |
fibroblast | 7.93e-12 | 76 |
GAG secreting cell | 1.44e-11 | 9 |
carbohydrate secreting cell | 1.44e-11 | 9 |
cardiac mesenchymal cell | 2.15e-09 | 4 |
migratory trunk neural crest cell | 2.15e-09 | 4 |
smooth muscle cell of the internal thoracic artery | 2.64e-09 | 2 |
preadipocyte | 9.97e-09 | 12 |
stromal cell | 1.44e-08 | 28 |
multi fate stem cell | 3.61e-08 | 427 |
somatic stem cell | 6.25e-08 | 433 |
stem cell | 1.27e-07 | 441 |
chondroblast | 7.61e-07 | 6 |
chondrocyte | 7.61e-07 | 6 |
extracellular matrix secreting cell | 8.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.41e-14 | 3 |
tendon | 4.41e-14 | 3 |
regular connective tissue | 4.41e-14 | 3 |
egg chorion | 1.59e-13 | 3 |
thoracic segment blood vessel | 2.20e-13 | 5 |
subclavian artery | 2.20e-13 | 5 |
cavity lining | 4.59e-12 | 12 |
serous membrane | 4.59e-12 | 12 |
omentum | 2.34e-11 | 6 |
peritoneum | 2.34e-11 | 6 |
abdominal cavity | 2.34e-11 | 6 |
visceral peritoneum | 2.34e-11 | 6 |
perirenal fat | 3.51e-10 | 2 |
trunk blood vessel | 1.38e-09 | 7 |
internal thoracic artery | 2.64e-09 | 2 |
organ component layer | 8.28e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.13e-13 | 3 |
leiomyoma | 1.13e-13 | 3 |
benign neoplasm | 2.29e-10 | 4 |