FFCP PHASE1:Hg19::chr8:104892850..104892852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA03 | |UniProt=D6RA03 | ||
|association_with_transcript=205bp_to_ENST00000436393,uc003yls.2_5end | |association_with_transcript=205bp_to_ENST00000436393,uc003yls.2_5end | ||
|cluster_id=chr8:104892850..104892852,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_49_at_RIMS2_5end | |description=CAGE_peak_49_at_RIMS2_5end | ||
|id=chr8:104892850..104892852,+ | |id=chr8:104892850..104892852,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!3.79e-11!4;DOID:1325!6.39e-07!7;DOID:3904!6.39e-07!7 | |ontology_enrichment_disease=DOID:5409!3.79e-11!4;DOID:1325!6.39e-07!7;DOID:3904!6.39e-07!7 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.56e-79!2;UBERON:0002757!1.56e-79!2;UBERON:0010134!1.56e-79!2;UBERON:0002784!1.56e-79!2;UBERON:0005408!1.56e-79!2;UBERON:0001899!1.56e-79!2;UBERON:0003296!1.81e-40!4;UBERON:0010133!1.81e-40!4;UBERON:0001894!1.14e-23!7;UBERON:0006222!1.14e-23!7;UBERON:0000966!3.22e-09!5;UBERON:0005388!3.22e-09!5;UBERON:0001802!3.22e-09!5;UBERON:0000970!5.93e-09!20;UBERON:0002104!1.42e-08!21;UBERON:0000020!6.52e-08!23;UBERON:0001032!1.27e-07!24;UBERON:0004456!1.27e-07!24 | |ontology_enrichment_uberon=UBERON:0001905!1.56e-79!2;UBERON:0002757!1.56e-79!2;UBERON:0010134!1.56e-79!2;UBERON:0002784!1.56e-79!2;UBERON:0005408!1.56e-79!2;UBERON:0001899!1.56e-79!2;UBERON:0003296!1.81e-40!4;UBERON:0010133!1.81e-40!4;UBERON:0001894!1.14e-23!7;UBERON:0006222!1.14e-23!7;UBERON:0000966!3.22e-09!5;UBERON:0005388!3.22e-09!5;UBERON:0001802!3.22e-09!5;UBERON:0000970!5.93e-09!20;UBERON:0002104!1.42e-08!21;UBERON:0000020!6.52e-08!23;UBERON:0001032!1.27e-07!24;UBERON:0004456!1.27e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.43e-131;2!UBERON:0002757;6.43e-131;2!UBERON:0010134;6.43e-131;2!UBERON:0005408;6.43e-131;2!UBERON:0001899;6.43e-131;2!UBERON:0003296;2.83e-66;4!UBERON:0010133;2.83e-66;4!UBERON:0002784;2.83e-66;4!UBERON:0001894;1.64e-38;7!UBERON:0000949;5.48e-08;43!UBERON:0002368;5.52e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.99e-131,2;UBERON:0002757,8.99e-131,2;UBERON:0010134,8.99e-131,2;UBERON:0005408,8.99e-131,2;UBERON:0001899,8.99e-131,2;UBERON:0003296,3.35e-66,4;UBERON:0010133,3.35e-66,4;UBERON:0002784,3.35e-66,4;UBERON:0001894,1.80e-38,7;UBERON:0006222,1.80e-38,7;UBERON:0002368,1.14e-08,35;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41;UBERON:0000949,5.58e-07,45 | |||
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|short_description=p49@RIMS2 | |short_description=p49@RIMS2 | ||
}} | }} |
Latest revision as of 01:03, 25 September 2015
Short description: | p49@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_RIMS2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 205bp_to_ENST00000436393, uc003yls.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | D6RA03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 8.99e-131 | 2 |
regional part of epithalamus | 8.99e-131 | 2 |
secretory circumventricular organ | 8.99e-131 | 2 |
circumventricular organ | 8.99e-131 | 2 |
epithalamus | 8.99e-131 | 2 |
gland of diencephalon | 3.35e-66 | 4 |
neuroendocrine gland | 3.35e-66 | 4 |
regional part of diencephalon | 3.35e-66 | 4 |
diencephalon | 1.80e-38 | 7 |
future diencephalon | 1.80e-38 | 7 |
endocrine gland | 1.14e-08 | 35 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
endocrine system | 5.58e-07 | 45 |