FFCP PHASE1:Hg19::chr8:104892668..104892678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA03 | |UniProt=D6RA03 | ||
|association_with_transcript=23bp_to_ENST00000436393,uc003yls.2_5end | |association_with_transcript=23bp_to_ENST00000436393,uc003yls.2_5end | ||
|cluster_id=chr8:104892668..104892678,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_38_at_RIMS2_5end | |description=CAGE_peak_38_at_RIMS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002149!8.97e-07!6;CL:0002255!8.97e-07!6 | |ontology_enrichment_celltype=CL:0002149!8.97e-07!6;CL:0002255!8.97e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.70e-18;3 | |ontology_enrichment_development_v019=UBERON:0003056;8.70e-18;3 | ||
|ontology_enrichment_disease=DOID:3001!8.97e-07!6 | |ontology_enrichment_disease=DOID:3001!8.97e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!7.41e-67!2;UBERON:0002757!7.41e-67!2;UBERON:0010134!7.41e-67!2;UBERON:0002784!7.41e-67!2;UBERON:0005408!7.41e-67!2;UBERON:0001899!7.41e-67!2;UBERON:0003296!4.28e-34!4;UBERON:0010133!4.28e-34!4;UBERON:0001894!5.35e-20!7;UBERON:0006222!5.35e-20!7;UBERON:0000966!6.13e-08!5;UBERON:0005388!6.13e-08!5;UBERON:0001802!6.13e-08!5;UBERON:0000970!1.33e-07!20;UBERON:0002104!2.77e-07!21;UBERON:0000020!9.95e-07!23 | |ontology_enrichment_uberon=UBERON:0001905!7.41e-67!2;UBERON:0002757!7.41e-67!2;UBERON:0010134!7.41e-67!2;UBERON:0002784!7.41e-67!2;UBERON:0005408!7.41e-67!2;UBERON:0001899!7.41e-67!2;UBERON:0003296!4.28e-34!4;UBERON:0010133!4.28e-34!4;UBERON:0001894!5.35e-20!7;UBERON:0006222!5.35e-20!7;UBERON:0000966!6.13e-08!5;UBERON:0005388!6.13e-08!5;UBERON:0001802!6.13e-08!5;UBERON:0000970!1.33e-07!20;UBERON:0002104!2.77e-07!21;UBERON:0000020!9.95e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.30e-99;2!UBERON:0002757;7.30e-99;2!UBERON:0010134;7.30e-99;2!UBERON:0005408;7.30e-99;2!UBERON:0001899;7.30e-99;2!UBERON:0003296;3.52e-50;4!UBERON:0010133;3.52e-50;4!UBERON:0002784;3.52e-50;4!UBERON:0001894;2.94e-29;7!UBERON:0000966;3.10e-11;5!UBERON:0005388;3.10e-11;5!UBERON:0001802;3.10e-11;5!UBERON:0000970;6.15e-11;20!UBERON:0002104;1.81e-10;21!UBERON:0000020;1.19e-09;23!UBERON:0001032;2.72e-09;24!UBERON:0004456;2.72e-09;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;7.30e-99;2!UBERON:0002757;7.30e-99;2!UBERON:0010134;7.30e-99;2!UBERON:0005408;7.30e-99;2!UBERON:0001899;7.30e-99;2!UBERON:0003296;3.52e-50;4!UBERON:0010133;3.52e-50;4!UBERON:0002784;3.52e-50;4!UBERON:0001894;2.94e-29;7!UBERON:0000966;3.10e-11;5!UBERON:0005388;3.10e-11;5!UBERON:0001802;3.10e-11;5!UBERON:0000970;6.15e-11;20!UBERON:0002104;1.81e-10;21!UBERON:0000020;1.19e-09;23!UBERON:0001032;2.72e-09;24!UBERON:0004456;2.72e-09;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0003056,4.28e-08,61;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p38@RIMS2 | |short_description=p38@RIMS2 | ||
}} | }} |
Latest revision as of 01:03, 25 September 2015
Short description: | p38@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_RIMS2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 23bp_to_ENST00000436393, uc003yls.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | D6RA03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
pre-chordal neural plate | 4.28e-08 | 61 |
endocrine gland | 9.98e-07 | 35 |