FFCP PHASE1:Hg19::chr2:224849586..224849594,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8951 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=190bp_to_ENST00000478966_5end | |||
|cluster_id=chr2:224849586..224849594,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_25_at_SERPINE2_5end | |||
|id=chr2:224849586..224849594,- | |||
|ontology_enrichment_celltype=CL:0000057!1.15e-15!75;CL:0000055!3.13e-13!180;CL:0000499!1.45e-11!27;CL:0002620!4.16e-11!23;CL:1000306!4.19e-07!4;CL:0002547!4.19e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000135;8.60e-27;3!CL:0000388;8.60e-27;3!CL:0002579;2.46e-26;3!CL:0002334;5.99e-18;12!CL:0000153;8.49e-16;9!CL:0000447;8.49e-16;9!CL:0000499;1.47e-14;28!CL:0000138;1.03e-13;6!CL:0002541;4.89e-13;3!CL:0002581;1.80e-10;1!CL:0002616;2.07e-10;1!CL:0000511;7.54e-10;1!CL:0002625;7.54e-10;1!CL:0000216;7.54e-10;1!CL:0000327;1.48e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.88e-27,3;CL:0000388,7.88e-27,3;CL:0002579,1.90e-26,3;CL:0002334,6.00e-18,12;CL:0000153,8.18e-16,9;CL:0000447,8.18e-16,9;CL:0000499,1.41e-14,28;CL:0000057,2.24e-14,76;CL:0000058,1.08e-13,6;CL:0000138,1.08e-13,6;CL:0002541,4.89e-13,3;CL:0002581,1.80e-10,1;CL:0002616,1.98e-10,1;CL:0000511,6.33e-10,1;CL:0002625,6.33e-10,1;CL:0000216,6.33e-10,1;CL:0000327,1.45e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.86e-08!5;DOID:450!9.86e-08!5;DOID:66!9.86e-08!5;DOID:423!9.86e-08!5;DOID:0080000!9.86e-08!5;DOID:11722!9.86e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!4.19e-07!4;UBERON:0007240!4.19e-07!4;UBERON:0005742!4.19e-07!4;UBERON:0005734!4.19e-07!4;UBERON:0004664!4.19e-07!4;UBERON:0004663!4.19e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.60e-27;3!UBERON:0000043;8.60e-27;3!UBERON:0007845;8.60e-27;3!UBERON:0005406;3.92e-19;2!UBERON:0004457;1.34e-15;9!UBERON:0000042;1.34e-15;9!UBERON:0003688;1.74e-13;6!UBERON:0002358;1.74e-13;6!UBERON:0003684;1.74e-13;6!UBERON:0001178;1.74e-13;6!UBERON:0003124;4.89e-13;3!UBERON:0000920;4.89e-13;3!UBERON:0001136;7.54e-10;1!UBERON:0001343;7.54e-10;1!UBERON:0004910;7.54e-10;1!UBERON:0004813;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.88e-27,3;UBERON:0000043,7.88e-27,3;UBERON:0007845,7.88e-27,3;UBERON:0005406,3.75e-19,2;UBERON:0003688,1.53e-13,6;UBERON:0002358,1.53e-13,6;UBERON:0003684,1.53e-13,6;UBERON:0001178,1.53e-13,6;UBERON:0000920,4.89e-13,3;UBERON:0004457,8.15e-12,12;UBERON:0000042,8.15e-12,12;UBERON:0001136,6.33e-10,1;UBERON:0001343,6.33e-10,1;UBERON:0004910,6.33e-10,1;UBERON:0005154,6.33e-10,1;UBERON:0005295,6.33e-10,1;UBERON:0004813,6.33e-10,1;UBERON:0005297,6.33e-10,1;UBERON:0005294,6.33e-10,1;UBERON:0010141,6.33e-10,1;UBERON:0005891,6.33e-10,1;UBERON:0004923,1.81e-07,66 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,4.36169262050184,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.30361867064741,2.3858578411533,3.89307896242109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,4.01571269048339,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0.61246251376468,0,0,1.18800285728205,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.640672166455702,0.211931901159562,0.300091096084402,1.03052529238439,0.515281080091258,0.744467425326359,0.337552664482532,0.194874010322397,0.252433774244115,0,0,1.77504796258307,0.403008392910561,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.822619941626588,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0,0.117141414992713,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,1.24053903909388,0,0.561320188866147,2.05022638809122,1.53512174720011,1.76939313257968,5.93672265779964,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,2.74439925886963,0.987884678879706,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,3.50901275705111,0.457987967009312,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0.664653872707185,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0.542999601753713,0.864221491201268,2.61269888087527,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0.466311601748341,0.147855149989634,0,0,0,0.829412415681711,0.53168342911599,0.521745061811734,0,0,0,0.181848659202559,0.322231671127465,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0.342976018874837,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,3.34795516350076,2.31087814315709,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p25@SERPINE2 | |||
}} |
Latest revision as of 00:55, 25 September 2015
Short description: | p25@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 190bp_to_ENST00000478966_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.88e-27 | 3 |
tendon cell | 7.88e-27 | 3 |
omentum preadipocyte | 1.90e-26 | 3 |
preadipocyte | 6.00e-18 | 12 |
GAG secreting cell | 8.18e-16 | 9 |
carbohydrate secreting cell | 8.18e-16 | 9 |
stromal cell | 1.41e-14 | 28 |
fibroblast | 2.24e-14 | 76 |
chondroblast | 1.08e-13 | 6 |
chondrocyte | 1.08e-13 | 6 |
chorionic membrane mesenchymal stem cell | 4.89e-13 | 3 |
perirenal preadipocyte | 1.80e-10 | 1 |
perirenal adipocyte cell | 1.98e-10 | 1 |
androgen binding protein secreting cell | 6.33e-10 | 1 |
seminiferous tubule epithelial cell | 6.33e-10 | 1 |
Sertoli cell | 6.33e-10 | 1 |
extracellular matrix secreting cell | 1.45e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.88e-27 | 3 |
tendon | 7.88e-27 | 3 |
regular connective tissue | 7.88e-27 | 3 |
perirenal fat | 3.75e-19 | 2 |
omentum | 1.53e-13 | 6 |
peritoneum | 1.53e-13 | 6 |
abdominal cavity | 1.53e-13 | 6 |
visceral peritoneum | 1.53e-13 | 6 |
egg chorion | 4.89e-13 | 3 |
cavity lining | 8.15e-12 | 12 |
serous membrane | 8.15e-12 | 12 |
mesothelium | 6.33e-10 | 1 |
seminiferous tubule of testis | 6.33e-10 | 1 |
epithelium of male gonad | 6.33e-10 | 1 |
epithelial cord | 6.33e-10 | 1 |
sex cord | 6.33e-10 | 1 |
seminiferous tubule epithelium | 6.33e-10 | 1 |
testis sex cord | 6.33e-10 | 1 |
genital ridge | 6.33e-10 | 1 |
primitive sex cord of indifferent gonad | 6.33e-10 | 1 |
coelomic epithelium | 6.33e-10 | 1 |
organ component layer | 1.81e-07 | 66 |