FFCP PHASE1:Hg19::chr19:10397648..10397690,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:10397648..10397690,+
|short_description=p2@ICAM4
|description=CAGE_peak_2_at_ICAM4_5end
|association_with_transcript=0bp_to_ENST00000340992,ENST0000038077...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3386 | |EntrezGene=3386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5347 | |HGNC=5347 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWR0,Q14773 | |UniProt=Q9BWR0,Q14773 | ||
|association_with_transcript=0bp_to_ENST00000340992,ENST00000380770,ENST00000393717,uc002mnr.1,uc002mns.1,uc002mnt.1_5end | |||
|cluster_id=chr19:10397648..10397690,+ | |||
|description=CAGE_peak_2_at_ICAM4_5end | |||
|id=chr19:10397648..10397690,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.43e-28!112;CL:0000049!2.43e-28!112;CL:0000037!1.23e-18!172;CL:0000566!1.23e-18!172;CL:0000988!8.10e-18!182;CL:0002032!9.74e-17!165;CL:0000837!9.74e-17!165;CL:0000839!7.14e-13!70;CL:0002057!1.22e-11!42;CL:0000766!2.19e-11!76;CL:0000557!1.58e-10!71;CL:0000860!3.13e-10!45;CL:0002194!8.26e-09!63;CL:0000576!8.26e-09!63;CL:0000040!8.26e-09!63;CL:0000559!8.26e-09!63;CL:0002009!3.14e-08!65;CL:0002393!3.29e-07!9;CL:0002397!3.29e-07!9;CL:0000738!9.88e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.74e-10;3!CL:0002396;2.74e-10;3!CL:0000097;3.99e-09;5!CL:0000763;1.66e-07;100!CL:0000764;3.32e-07;2!CL:0000558;3.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.30e-23,108;CL:0000049,1.30e-23,108;CL:0000037,7.82e-14,168;CL:0002032,7.41e-13,161;CL:0000837,7.41e-13,161;CL:0000988,1.17e-12,177;CL:0000875,2.75e-10,3;CL:0002396,2.75e-10,3;CL:0000097,5.24e-09,5;CL:0002028,5.24e-09,5;CL:0002393,3.38e-08,9;CL:0002397,3.38e-08,9;CL:0000764,3.33e-07,2;CL:0000765,3.33e-07,2;CL:0000050,3.33e-07,2;CL:0000038,3.33e-07,2;CL:0000558,3.33e-07,2;CL:0000547,3.33e-07,2;CL:0000549,3.33e-07,2;CL:0000550,3.33e-07,2;CL:0000552,3.33e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000049;6.08e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!2.34e-17!31;DOID:1240!4.98e-14!39;DOID:2531!3.96e-09!51;DOID:0060083!3.96e-09!51;DOID:1036!5.20e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.63e-30;31!DOID:1240;1.10e-17;39!DOID:1036;1.49e-13;8!DOID:2531;1.31e-12;51!DOID:0060083;1.31e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.55e-30,31;DOID:1240,3.65e-23,39;DOID:2531,1.78e-16,51;DOID:0060083,1.78e-16,51;DOID:1036,1.42e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.69e-13!102;UBERON:0003061!6.69e-13!102;UBERON:0002193!1.67e-11!112;UBERON:0002405!4.31e-09!115;UBERON:0002371!9.23e-09!80;UBERON:0001474!6.83e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,4.18680700783456,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,2.36018566109342,0.767658796194425,0.464448369948228,0,0,0.739508020333575,0,0,2.05520307534393,0,0.401088894940283,0.868043482863407,0,0.647787332037959,0,0.436194716338694,0.755751887377619,0.242584061187816,0.464858073811369,1.23350366406548,0,0.863077176966451,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.65156653411535,0,0,0.316462387440884,3.38008458099107,1.91343869968539,0.628975936525128,0.898629049171961,0.600707571366025,0,17.3857773682162,16.1122508531263,10.2291926108195,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,3.36305137788922,8.95505888235262,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,1.29818957461873,0.174129737299267,0.398873881556595,0.238490624305342,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,2.58275720940538,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,4.22632483263485,1.03664057770386,2.16179930125442,3.28230326908588,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0.428933980974443,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0.431428401637234,0.640365346820666,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01631605266991,9.93454713894622,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.661139661443912,0.576570202095319,1.78657797492418,0.50578890427775,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.539617372749944,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0.551365343546124,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0,0,0,0,0.192444225451024,0,0,0.659006605437454,0,0,0,0.229723400206959,4.05958087385735,3.82318603571188,4.5571774973933,0,0.822724546172388,2.59389324477087,4.32025149790492,6.34500141035416,0.106824071127473,0,0,0,0.28853842595289,0,0.956557636372934,0,1.53204296105893,2.96343015813436,6.16781686521655,3.36956613736151,0.684704037099577,0,5.01268954180134,5.41733688965131,0.802940375518498,0.201799707191048,0,3.09154810280188,0,0,0.333698283423817,0.976940477010201,4.73290495621912,28.3101017579738,64.097995798808,9.9921590399346,25.3776609158129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.69169171316418,1.6156375993759,1.4124158349861,0,0,0,0,0.470940769185074,9.64027755020907,10.1518047277731,13.1361897992885,10.4049383925022,24.8577389868682,7.78789237003856,0,0,2.26164914294305,0,0,0,0.611030144933625,0.296521128680622,0,0.208843899010911,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.470284307407084,0,2.32991899054908,0.472699093843342,0.988990300573997,1.01105315781277,0,0,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,1.15149118391667,0,0,0,0,0,0,0,3.77625595446959,0,0.339936274560377,0,27.8264466715665,0,0,0,0,0.961086713109252,3.14408610199332,2.07119527673598,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0.624902039810533,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,1.16916185303633,0.797189041880179,2.28991551958182,0,0,0,0,5.01451129562462,0,0,0,0,0.622077260032973,0,0,2.35898912783845,0,1.01839517972415,0,1.36329340684902,1.11728983594649,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.1152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| |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,4.18680700783456,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,2.36018566109342,0.767658796194425,0.464448369948228,0,0,0.739508020333575,0,0,2.05520307534393,0,0.401088894940283,0.868043482863407,0,0.647787332037959,0,0.436194716338694,0.755751887377619,0.242584061187816,0.464858073811369,1.23350366406548,0,0.863077176966451,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.65156653411535,0,0,0.316462387440884,3.38008458099107,1.91343869968539,0.628975936525128,0.898629049171961,0.600707571366025,0,17.3857773682162,16.1122508531263,10.2291926108195,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,3.36305137788922,8.95505888235262,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,1.29818957461873,0.174129737299267,0.398873881556595,0.238490624305342,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,2.58275720940538,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,4.22632483263485,1.03664057770386,2.16179930125442,3.28230326908588,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0.428933980974443,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0.431428401637234,0.640365346820666,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01631605266991,9.93454713894622,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.661139661443912,0.576570202095319,1.78657797492418,0.50578890427775,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.539617372749944,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0.551365343546124,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0,0,0,0,0.192444225451024,0,0,0.659006605437454,0,0,0,0.229723400206959,4.05958087385735,3.82318603571188,4.5571774973933,0,0.822724546172388,2.59389324477087,4.32025149790492,6.34500141035416,0.106824071127473,0,0,0,0.28853842595289,0,0.956557636372934,0,1.53204296105893,2.96343015813436,6.16781686521655,3.36956613736151,0.684704037099577,0,5.01268954180134,5.41733688965131,0.802940375518498,0.201799707191048,0,3.09154810280188,0,0,0.333698283423817,0.976940477010201,4.73290495621912,28.3101017579738,64.097995798808,9.9921590399346,25.3776609158129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.69169171316418,1.6156375993759,1.4124158349861,0,0,0,0,0.470940769185074,9.64027755020907,10.1518047277731,13.1361897992885,10.4049383925022,24.8577389868682,7.78789237003856,0,0,2.26164914294305,0,0,0,0.611030144933625,0.296521128680622,0,0.208843899010911,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.470284307407084,0,2.32991899054908,0.472699093843342,0.988990300573997,1.01105315781277,0,0,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,1.15149118391667,0,0,0,0,0,0,0,3.77625595446959,0,0.339936274560377,0,27.8264466715665,0,0,0,0,0.961086713109252,3.14408610199332,2.07119527673598,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0.624902039810533,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,1.16916185303633,0.797189041880179,2.28991551958182,0,0,0,0,5.01451129562462,0,0,0,0,0.622077260032973,0,0,2.35898912783845,0,1.01839517972415,0,1.36329340684902,1.11728983594649,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.1152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| ||
|short_description=p2@ICAM4 | |||
}} | }} |
Latest revision as of 00:36, 25 September 2015
Short description: | p2@ICAM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ICAM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340992, ENST00000380770, ENST00000393717, uc002mnr.1, uc002mns.1, uc002mnt.1_5end |
EntrezGene: | ICAM4 |
HGNC: | 5347 |
UniProt: | Q9BWR0Q14773 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.30e-23 | 108 |
common myeloid progenitor | 1.30e-23 | 108 |
hematopoietic stem cell | 7.82e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.41e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-13 | 161 |
hematopoietic cell | 1.17e-12 | 177 |
non-classical monocyte | 2.75e-10 | 3 |
CD14-low, CD16-positive monocyte | 2.75e-10 | 3 |
mast cell | 5.24e-09 | 5 |
basophil mast progenitor cell | 5.24e-09 | 5 |
intermediate monocyte | 3.38e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.38e-08 | 9 |
erythroid lineage cell | 3.33e-07 | 2 |
erythroblast | 3.33e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.33e-07 | 2 |
erythroid progenitor cell | 3.33e-07 | 2 |
reticulocyte | 3.33e-07 | 2 |
proerythroblast | 3.33e-07 | 2 |
basophilic erythroblast | 3.33e-07 | 2 |
polychromatophilic erythroblast | 3.33e-07 | 2 |
orthochromatic erythroblast | 3.33e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.55e-30 | 31 |
leukemia | 3.65e-23 | 39 |
hematologic cancer | 1.78e-16 | 51 |
immune system cancer | 1.78e-16 | 51 |
chronic leukemia | 1.42e-13 | 8 |