FFCP PHASE1:Hg19::chr5:138842286..138842336,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:138842286..138842336,-
|short_description=p1@ECSCR
|description=CAGE_peak_1_at_ECSCR_5end
|association_with_transcript=0bp_to_ENST00000515823,NM_001077693,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=641700 | |EntrezGene=641700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35454 | |HGNC=35454 | ||
|TSSclassifier=strong | |||
|UniProt=Q19T08,C3RSF2 | |UniProt=Q19T08,C3RSF2 | ||
|association_with_transcript=0bp_to_ENST00000515823,NM_001077693,uc011cze.1_5end | |||
|cluster_id=chr5:138842286..138842336,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_ECSCR_5end | |||
|id=chr5:138842286..138842336,- | |||
|ontology_enrichment_celltype=CL:0002139!7.35e-19!24;CL:0000115!1.33e-17!35;CL:0000222!1.51e-17!119;CL:0000071!1.37e-14!18;CL:0002546!1.37e-14!18;CL:0002078!1.91e-12!44;CL:0000213!2.92e-11!57;CL:0000215!2.92e-11!57;CL:0000359!3.75e-09!32;CL:0000183!6.02e-09!59;CL:0000680!1.92e-08!57;CL:0000056!1.92e-08!57;CL:0000355!1.92e-08!57;CL:0000187!1.93e-08!54;CL:1000413!3.83e-08!9;CL:0000393!5.76e-08!60;CL:0000211!5.76e-08!60;CL:0000055!6.47e-07!180;CL:0000192!8.06e-07!42;CL:0000514!8.06e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.49e-21;24!CL:0000115;1.27e-16;36!CL:0000071;2.95e-16;18!CL:1000413;5.48e-09;9!CL:0002078;1.04e-08;45!CL:0000359;1.08e-08;32!CL:0000213;4.68e-08;58!CL:0000215;4.68e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.56e-21,24;CL:0000115,1.27e-19,36;CL:0000071,2.99e-16,18;CL:0002546,2.99e-16,18;CL:0000222,1.72e-15,121;CL:0002078,3.78e-13,45;CL:0000213,8.91e-12,58;CL:0000215,8.91e-12,58;CL:1000413,5.54e-09,9;CL:0000359,6.25e-09,32 | |||
|ontology_enrichment_development_v019=CL:0002546;2.95e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.95e-16;18!UBERON:0001986;2.95e-16;18!UBERON:0004852;2.95e-16;18!UBERON:0000055;5.61e-14;65!UBERON:0001637;2.90e-13;42!UBERON:0003509;2.90e-13;42!UBERON:0004572;2.90e-13;42!UBERON:0002049;3.26e-13;75!UBERON:0007798;3.26e-13;75!UBERON:0007500;8.43e-13;56!UBERON:0001981;8.43e-13;56!UBERON:0004537;8.43e-13;56!UBERON:0000487;2.32e-12;22!UBERON:0007100;5.01e-12;25!UBERON:0004573;2.73e-11;33!UBERON:0004571;2.73e-11;33!UBERON:0006914;1.84e-10;25!UBERON:0000948;2.86e-10;22!UBERON:0001009;1.61e-09;112!UBERON:0007023;3.50e-09;114!UBERON:0003915;5.48e-09;9!UBERON:0004700;5.48e-09;9!UBERON:0001917;5.48e-09;9!UBERON:0004535;5.94e-09;109!UBERON:0000073;3.44e-08;53!UBERON:0002616;3.44e-08;53!UBERON:0002780;3.95e-08;41!UBERON:0001890;3.95e-08;41!UBERON:0000947;6.99e-08;21!UBERON:0010191;6.99e-08;21!UBERON:0003528;7.91e-08;34!UBERON:0002020;7.91e-08;34!UBERON:0002791;9.75e-08;32!UBERON:0003914;1.06e-07;74!UBERON:0001869;1.20e-07;32!UBERON:0001893;1.37e-07;34!UBERON:0000490;3.51e-07;33!UBERON:0001017;3.65e-07;75!UBERON:0002465;4.95e-07;10!UBERON:0000955;8.12e-07;68!UBERON:0000956;8.24e-07;25!UBERON:0000203;8.24e-07;25 | |||
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| ||
|short_description=p1@ECSCR | |||
}} | }} |
Latest revision as of 00:29, 25 September 2015
Short description: | p1@ECSCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ECSCR_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000515823, NM_001077693, uc011cze.1_5end |
EntrezGene: | ECSCR |
HGNC: | 35454 |
UniProt: | Q19T08C3RSF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.56e-21 | 24 |
endothelial cell | 1.27e-19 | 36 |
blood vessel endothelial cell | 2.99e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.99e-16 | 18 |
mesodermal cell | 1.72e-15 | 121 |
meso-epithelial cell | 3.78e-13 | 45 |
lining cell | 8.91e-12 | 58 |
barrier cell | 8.91e-12 | 58 |
endothelial cell of artery | 5.54e-09 | 9 |
vascular associated smooth muscle cell | 6.25e-09 | 32 |