FFCP PHASE1:Hg19::chr4:122744998..122745093,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=890 | |EntrezGene=890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1578 | |HGNC=1578 | ||
|TSSclassifier=strong | |||
|UniProt=P20248 | |UniProt=P20248 | ||
|association_with_transcript=0bp_to_ENST00000274026,NM_001237,uc003iec.3_5end | |association_with_transcript=0bp_to_ENST00000274026,NM_001237,uc003iec.3_5end | ||
|cluster_id=chr4:122744998..122745093,- | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_CCNA2_5end | |description=CAGE_peak_1_at_CCNA2_5end | ||
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|ontology_enrichment_celltype=CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000012!2.79e-20!682;CL:0000066!2.78e-15!254;CL:0000003!7.45e-12!722;CL:0000055!7.88e-10!180;CL:0002321!3.47e-09!248;CL:0000144!4.39e-09!625;CL:0000063!7.95e-09!578;CL:0000220!1.27e-08!246 | |ontology_enrichment_celltype=CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000012!2.79e-20!682;CL:0000066!2.78e-15!254;CL:0000003!7.45e-12!722;CL:0000055!7.88e-10!180;CL:0002321!3.47e-09!248;CL:0000144!4.39e-09!625;CL:0000063!7.95e-09!578;CL:0000220!1.27e-08!246 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-15,253;CL:0002321,5.00e-09,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.00e-42!235;DOID:14566!5.04e-41!239;DOID:2531!6.03e-23!51;DOID:0060083!6.03e-23!51;DOID:0050686!3.72e-22!137;DOID:1240!4.18e-18!39;DOID:0050687!4.80e-17!143;DOID:8692!8.47e-14!31;DOID:305!9.69e-14!106 | |ontology_enrichment_disease=DOID:162!2.00e-42!235;DOID:14566!5.04e-41!239;DOID:2531!6.03e-23!51;DOID:0060083!6.03e-23!51;DOID:0050686!3.72e-22!137;DOID:1240!4.18e-18!39;DOID:0050687!4.80e-17!143;DOID:8692!8.47e-14!31;DOID:305!9.69e-14!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.28e-14;39!DOID:2531;5.62e-14;51!DOID:0060083;5.62e-14;51!DOID:8692;1.73e-13;31 | |ontology_enrichment_disease_v019=DOID:1240;2.28e-14;39!DOID:2531;5.62e-14;51!DOID:0060083;5.62e-14;51!DOID:8692;1.73e-13;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,8.15e-43,235;DOID:14566,2.11e-41,239;DOID:2531,4.09e-23,51;DOID:0060083,4.09e-23,51;DOID:0050686,2.23e-22,137;DOID:1240,3.10e-18,39;DOID:0050687,3.63e-17,143;DOID:8692,6.79e-14,31;DOID:305,7.78e-14,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CCNA2 | |short_description=p1@CCNA2 | ||
}} | }} |
Latest revision as of 00:29, 25 September 2015
Short description: | p1@CCNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNA2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000274026, NM_001237, uc003iec.3_5end |
EntrezGene: | CCNA2 |
HGNC: | 1578 |
UniProt: | P20248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-15 | 253 |
embryonic cell | 5.00e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.15e-43 | 235 |
disease of cellular proliferation | 2.11e-41 | 239 |
hematologic cancer | 4.09e-23 | 51 |
immune system cancer | 4.09e-23 | 51 |
organ system cancer | 2.23e-22 | 137 |
leukemia | 3.10e-18 | 39 |
cell type cancer | 3.63e-17 | 143 |
myeloid leukemia | 6.79e-14 | 31 |
carcinoma | 7.78e-14 | 106 |