FFCP PHASE1:Hg19::chr4:122744998..122745093,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=890 | |EntrezGene=890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1578 | |HGNC=1578 | ||
|TSSclassifier=strong | |||
|UniProt=P20248 | |UniProt=P20248 | ||
|association_with_transcript=0bp_to_ENST00000274026,NM_001237,uc003iec.3_5end | |association_with_transcript=0bp_to_ENST00000274026,NM_001237,uc003iec.3_5end | ||
|cluster_id=chr4:122744998..122745093,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_CCNA2_5end | |description=CAGE_peak_1_at_CCNA2_5end | ||
|id=chr4:122744998..122745093,- | |id=chr4:122744998..122745093,- | ||
|ontology_enrichment_celltype=CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000012!2.79e-20!682;CL:0000066!2.78e-15!254;CL:0000003!7.45e-12!722;CL:0000055!7.88e-10!180;CL:0002321!3.47e-09!248;CL:0000144!4.39e-09!625;CL:0000063!7.95e-09!578;CL:0000220!1.27e-08!246 | |ontology_enrichment_celltype=CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000012!2.79e-20!682;CL:0000066!2.78e-15!254;CL:0000003!7.45e-12!722;CL:0000055!7.88e-10!180;CL:0002321!3.47e-09!248;CL:0000144!4.39e-09!625;CL:0000063!7.95e-09!578;CL:0000220!1.27e-08!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-15,253;CL:0002321,5.00e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.00e-42!235;DOID:14566!5.04e-41!239;DOID:2531!6.03e-23!51;DOID:0060083!6.03e-23!51;DOID:0050686!3.72e-22!137;DOID:1240!4.18e-18!39;DOID:0050687!4.80e-17!143;DOID:8692!8.47e-14!31;DOID:305!9.69e-14!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.28e-14;39!DOID:2531;5.62e-14;51!DOID:0060083;5.62e-14;51!DOID:8692;1.73e-13;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.15e-43,235;DOID:14566,2.11e-41,239;DOID:2531,4.09e-23,51;DOID:0060083,4.09e-23,51;DOID:0050686,2.23e-22,137;DOID:1240,3.10e-18,39;DOID:0050687,3.63e-17,143;DOID:8692,6.79e-14,31;DOID:305,7.78e-14,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=4.36028110249336,14.9870366723688,1.55049844505568,7.00513088471913,0.446961094427288,0,12.6649939084155,2.52687949370732,0.261185628199839,51.8498606018184,26.5164443829522,72.9594182914775,30.0694355180437,8.66364470720326,6.2965501388304,6.05092631806598,5.42425075221579,2.19093027116212,7.3189919818576,53.3114181472492,28.1520953917069,8.77673220138646,103.331191354311,138.653792598832,169.357020813389,140.065772735995,146.631652757603,163.088738881943,0,1.15148819429164,2.16742572642506,55.1652734687356,34.939886578277,13.6808983761711,217.682833630648,140.321032465085,37.5808562348604,1.10799081706375,0,0,1.79132379391939,0.971680998056939,1.03030227053675,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,1.09227722252426,0,3.41384178053206,1.20118796110804,3.4485146397269,2.64417949113945,1.90810750907073,0,0,0.382273228125229,0,0.560508562981536,67.1629416176446,0.590129310341499,0,0.411202997999018,11.5358681819568,0,0,0,36.3198089445666,0.294605907474837,1.99380505125259,0.812411591295047,50.2117973324647,38.3675075301641,71.5304885025991,53.8882534682404,56.5116017183352,0,0,0,76.8237343489499,0,0,0,1.91139248594458,1.30216690771284,0,1.05402583354441,0.383959833463255,2.49861453104692,1.18388626022008,1.64225599384209,0.403213486449465,0,0.144824403882799,0,42.9248550210327,44.112583836018,149.274369934826,11.0294340339896,19.1197405028287,71.5757352345989,9.73269740605272,81.5835472125906,43.6806913001251,52.4373670587962,5.37014209540622,21.49342200926,42.6402109202094,0.649094787309367,0.870648686496336,0.664789802594326,0,0,0,82.4863990571826,33.5491492091389,51.7239347395316,50.8777147731609,22.233470119125,54.7484903460734,68.5503490240739,13.4376714768051,18.4998456597089,20.0832367658802,42.6999076135696,25.0889794887109,21.4774610642389,79.4152253547076,17.8231228533987,130.199003838188,100.81368830915,142.566134291886,62.8598213610121,82.5861123824272,55.5101284109134,0,0,14.8271977728462,3.97577561356255,78.5109172320395,0.264818361626438,45.0333494575638,103.917835984119,35.8833664091077,27.7547388897233,9.37336683985208,45.4368111683659,38.6619628840005,95.2982895151464,13.4708110603989,2.88087962239999,36.5541433660723,18.4174445329889,81.5774704808562,21.072263957804,110.858166719714,137.592002712912,151.125068011619,28.7857381469399,120.009128013597,10.5392296799281,22.572054288359,21.5122228472344,29.1251635820168,8.62341770179486,143.422369088864,165.406683270737,106.946748576895,84.7226808300017,59.7651201808088,25.2399938963083,112.978454427381,149.431566528822,12.3863285514769,22.6767134240731,107.7327034943,44.2095350432903,25.7640540045629,17.681101351501,100.084365019071,95.5857020631359,68.6619865943991,13.531335100418,11.3152239773168,80.9421870937881,104.17766956738,99.5320676862562,16.6204333720435,31.9112961091277,26.6728273711774,156.248317552012,155.324888472781,161.393386645761,128.125063998998,184.446541990084,130.296917190071,15.6449532329816,12.8648187638577,91.1690480926372,0.464367928031979,2.88751792667834,94.8820536319548,111.94023421186,100.019577401645,90.1101757223659,96.5205937329359,98.230036311994,64.9886905331992,70.4435059799992,71.1782240350822,47.2419490959775,28.0483547606892,10.289350283285,2.94017422771084,1.26755034821831,1.96565443335525,0,182.324260058251,84.7390341562052,49.4115293659754,9.32877425973317,25.8524032492525,85.8517424395327,45.8312803534721,24.4356228982744,24.9584348467099,57.7325368101093,45.328788345255,9.04046945615827,33.0599165372859,46.2985512576611,35.1970181634007,59.2653298469456,73.829809940159,6.64785916435973,12.8702345826581,38.0495775459144,14.0600750980165,7.72717789714754,29.7727704209012,105.768615312064,142.410629871841,91.6284603204855,19.2138662779418,34.4269376991714,0.829312462163088,0.288239906833923,0.37872730027914,60.4499953661449,27.8851550657543,38.6817575793155,29.0823158238599,39.9998946615928,54.662436527593,10.2897515747008,92.8445378379587,59.2905693613261,196.033237999399,0.775630294546667,0,117.497082605284,9.0418959638856,24.9617848587279,74.8473459102834,72.3430573318719,50.0873696550267,27.4517747823643,0,55.9803429010923,121.499596741563,23.455868617008,247.880936228163,0,0,12.8965158624854,2.43247561282381,3.01354254859276,6.32501818449095,28.2757329480068,8.04033550838797,52.7756548650658,36.1953266668948,33.4926405757125,82.5471040535919,133.829661928272,0.591092280605782,0,0.128343036279748,77.7529550120738,48.15174592732,40.2110182644402,41.3765175375841,31.8969375826582,0,2.99161459204025,0,2.57652132610194,8.00272833695483,7.5954206635926,5.61521326133179,18.9134728124991,8.04282316673067,17.6883536638997,0.601892199455438,0,9.31257641632544,151.44343646608,62.3167789670957,51.7826342229774,1.95801157462741,0.343143423810856,1.03384013061444,0.431428401637234,0.960548020230999,20.6126748583456,61.5811126188839,58.36132661262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| ||
|short_description=p1@CCNA2 | |short_description=p1@CCNA2 | ||
}} | }} |
Latest revision as of 00:29, 25 September 2015
Short description: | p1@CCNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNA2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000274026, NM_001237, uc003iec.3_5end |
EntrezGene: | CCNA2 |
HGNC: | 1578 |
UniProt: | P20248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-15 | 253 |
embryonic cell | 5.00e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.15e-43 | 235 |
disease of cellular proliferation | 2.11e-41 | 239 |
hematologic cancer | 4.09e-23 | 51 |
immune system cancer | 4.09e-23 | 51 |
organ system cancer | 2.23e-22 | 137 |
leukemia | 3.10e-18 | 39 |
cell type cancer | 3.63e-17 | 143 |
myeloid leukemia | 6.79e-14 | 31 |
carcinoma | 7.78e-14 | 106 |