FFCP PHASE1:Hg19::chr8:104384616..104384641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115908 | |EntrezGene=115908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18831 | |HGNC=18831 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAA6,G3V141 | |UniProt=F8WAA6,G3V141 | ||
|association_with_transcript=-19bp_to_ENST00000297577,ENST00000520337_5end | |association_with_transcript=-19bp_to_ENST00000297577,ENST00000520337_5end | ||
|cluster_id=chr8:104384616..104384641,+ | |||
|description=CAGE_peak_5_at_CTHRC1_5end | |description=CAGE_peak_5_at_CTHRC1_5end | ||
|id=chr8:104384616..104384641,+ | |id=chr8:104384616..104384641,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.91e-50!180;CL:0000057!3.87e-31!75;CL:0000048!5.98e-26!430;CL:0000723!9.09e-25!436;CL:0000034!2.99e-23!444;CL:0000680!1.61e-21!57;CL:0000056!1.61e-21!57;CL:0000355!1.61e-21!57;CL:0000187!8.74e-21!54;CL:0002371!1.18e-20!591;CL:0000183!1.38e-20!59;CL:0000192!5.09e-20!42;CL:0000514!5.09e-20!42;CL:0000393!6.90e-18!60;CL:0000211!6.90e-18!60;CL:0000144!2.20e-17!625;CL:0000548!6.80e-17!679;CL:0000004!6.80e-17!679;CL:0000255!6.80e-17!679;CL:0000012!1.71e-16!682;CL:0000359!4.64e-15!32;CL:0002620!1.11e-12!23;CL:0002334!3.78e-12!12;CL:0000003!6.56e-12!722;CL:0002320!7.79e-11!365;CL:0000134!3.89e-10!358;CL:0000222!4.73e-10!119;CL:0000219!2.67e-09!390;CL:0002539!1.02e-07!10 | |ontology_enrichment_celltype=CL:0000055!7.91e-50!180;CL:0000057!3.87e-31!75;CL:0000048!5.98e-26!430;CL:0000723!9.09e-25!436;CL:0000034!2.99e-23!444;CL:0000680!1.61e-21!57;CL:0000056!1.61e-21!57;CL:0000355!1.61e-21!57;CL:0000187!8.74e-21!54;CL:0002371!1.18e-20!591;CL:0000183!1.38e-20!59;CL:0000192!5.09e-20!42;CL:0000514!5.09e-20!42;CL:0000393!6.90e-18!60;CL:0000211!6.90e-18!60;CL:0000144!2.20e-17!625;CL:0000548!6.80e-17!679;CL:0000004!6.80e-17!679;CL:0000255!6.80e-17!679;CL:0000012!1.71e-16!682;CL:0000359!4.64e-15!32;CL:0002620!1.11e-12!23;CL:0002334!3.78e-12!12;CL:0000003!6.56e-12!722;CL:0002320!7.79e-11!365;CL:0000134!3.89e-10!358;CL:0000222!4.73e-10!119;CL:0000219!2.67e-09!390;CL:0002539!1.02e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.47e-19;12!CL:0000057;8.64e-11;73!CL:0002620;1.92e-10;23!CL:0000134;3.47e-09;55!CL:0000136;6.15e-09;13!CL:0000048;6.36e-09;58!CL:0000723;2.30e-08;61!CL:0000569;9.77e-08;4!CL:0002320;1.49e-07;188!CL:0000359;6.64e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.44e-30,76;CL:0000048,2.15e-22,427;CL:0000723,1.11e-21,433;CL:0000034,9.27e-21,441;CL:0002334,9.22e-20,12;CL:0000134,3.10e-15,354;CL:0002320,4.78e-15,361;CL:0000219,2.02e-12,386;CL:0000136,1.00e-11,15;CL:0002620,1.04e-10,23;CL:0000569,8.39e-08,4;CL:0000011,8.39e-08,4;CL:0000359,2.71e-07,32;CL:0000192,3.83e-07,43;CL:0000514,3.83e-07,43;CL:0000680,4.27e-07,58;CL:0000056,4.27e-07,58;CL:0000355,4.27e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000011;9.77e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!8.32e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.79e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.23e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.93e-24!83;UBERON:0002329!8.93e-24!83;UBERON:0003077!8.93e-24!83;UBERON:0003059!8.93e-24!83;UBERON:0007282!8.93e-24!83;UBERON:0009618!8.93e-24!83;UBERON:0007285!8.93e-24!83;UBERON:0004290!2.70e-22!70;UBERON:0001134!5.60e-19!61;UBERON:0002036!5.60e-19!61;UBERON:0003082!5.60e-19!61;UBERON:0000486!2.21e-18!82;UBERON:0005256!3.62e-18!143;UBERON:0002385!7.66e-18!63;UBERON:0001015!7.66e-18!63;UBERON:0000383!7.66e-18!63;UBERON:0002100!2.66e-13!216;UBERON:0000490!1.79e-12!138;UBERON:0000475!1.90e-12!365;UBERON:0002199!2.68e-12!45;UBERON:0002416!2.68e-12!45;UBERON:0001637!4.45e-12!42;UBERON:0003509!4.45e-12!42;UBERON:0004572!4.45e-12!42;UBERON:0002049!5.24e-12!79;UBERON:0007798!5.24e-12!79;UBERON:0004872!1.31e-11!84;UBERON:0004573!2.82e-11!33;UBERON:0004571!2.82e-11!33;UBERON:0002384!2.96e-11!375;UBERON:0003102!4.68e-11!95;UBERON:0003914!5.68e-11!118;UBERON:0001981!5.96e-11!60;UBERON:0007500!5.96e-11!60;UBERON:0004537!5.96e-11!60;UBERON:0006965!5.96e-11!60;UBERON:0004535!7.70e-10!110;UBERON:0000055!1.45e-09!69;UBERON:0002097!3.11e-09!40;UBERON:0001009!3.79e-09!113;UBERON:0001013!2.03e-08!14;UBERON:0004237!1.02e-07!10;UBERON:0004695!1.02e-07!10;UBERON:0002111!1.02e-07!10;UBERON:0004178!1.02e-07!10;UBERON:0001135!1.47e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!8.93e-24!83;UBERON:0002329!8.93e-24!83;UBERON:0003077!8.93e-24!83;UBERON:0003059!8.93e-24!83;UBERON:0007282!8.93e-24!83;UBERON:0009618!8.93e-24!83;UBERON:0007285!8.93e-24!83;UBERON:0004290!2.70e-22!70;UBERON:0001134!5.60e-19!61;UBERON:0002036!5.60e-19!61;UBERON:0003082!5.60e-19!61;UBERON:0000486!2.21e-18!82;UBERON:0005256!3.62e-18!143;UBERON:0002385!7.66e-18!63;UBERON:0001015!7.66e-18!63;UBERON:0000383!7.66e-18!63;UBERON:0002100!2.66e-13!216;UBERON:0000490!1.79e-12!138;UBERON:0000475!1.90e-12!365;UBERON:0002199!2.68e-12!45;UBERON:0002416!2.68e-12!45;UBERON:0001637!4.45e-12!42;UBERON:0003509!4.45e-12!42;UBERON:0004572!4.45e-12!42;UBERON:0002049!5.24e-12!79;UBERON:0007798!5.24e-12!79;UBERON:0004872!1.31e-11!84;UBERON:0004573!2.82e-11!33;UBERON:0004571!2.82e-11!33;UBERON:0002384!2.96e-11!375;UBERON:0003102!4.68e-11!95;UBERON:0003914!5.68e-11!118;UBERON:0001981!5.96e-11!60;UBERON:0007500!5.96e-11!60;UBERON:0004537!5.96e-11!60;UBERON:0006965!5.96e-11!60;UBERON:0004535!7.70e-10!110;UBERON:0000055!1.45e-09!69;UBERON:0002097!3.11e-09!40;UBERON:0001009!3.79e-09!113;UBERON:0001013!2.03e-08!14;UBERON:0004237!1.02e-07!10;UBERON:0004695!1.02e-07!10;UBERON:0002111!1.02e-07!10;UBERON:0004178!1.02e-07!10;UBERON:0001135!1.47e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.71e-11;14!UBERON:0003688;6.14e-10;6!UBERON:0002358;6.14e-10;6!UBERON:0003684;6.14e-10;6!UBERON:0001178;6.14e-10;6!UBERON:0002072;4.11e-08;5!UBERON:0002199;1.00e-07;46!UBERON:0002416;1.00e-07;46!UBERON:0004573;1.59e-07;33!UBERON:0004571;1.59e-07;33!UBERON:0000947;3.73e-07;21!UBERON:0010191;3.73e-07;21!UBERON:0002097;4.65e-07;41!UBERON:0002384;5.56e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.30e-15,371;UBERON:0002199,1.79e-13,46;UBERON:0002416,1.79e-13,46;UBERON:0001013,4.02e-11,14;UBERON:0003102,6.61e-10,99;UBERON:0003688,1.03e-09,6;UBERON:0002358,1.03e-09,6;UBERON:0003684,1.03e-09,6;UBERON:0001178,1.03e-09,6;UBERON:0002097,4.49e-09,41;UBERON:0002072,3.15e-08,5;UBERON:0004573,4.81e-08,33;UBERON:0004571,4.81e-08,33;UBERON:0007503,1.28e-07,78;UBERON:0002329,1.65e-07,71;UBERON:0003059,1.65e-07,71;UBERON:0007282,1.65e-07,71;UBERON:0004290,1.65e-07,71;UBERON:0009618,1.65e-07,71;UBERON:0004872,2.38e-07,83;UBERON:0003077,2.55e-07,72;UBERON:0007285,2.55e-07,72;UBERON:0007524,3.88e-07,73;UBERON:0002119,5.95e-07,4;UBERON:0000947,7.79e-07,21;UBERON:0010191,7.79e-07,21 | |||
|phase1_expression=4.36028110249336,2.14100523890983,2.11431606143957,2.00146596706261,3.12872766099101,4.36169262050184,2.53299878168311,1.26343974685366,1.56711376919903,0.491467873003018,0,0,0,0.866364470720326,0.994192127183747,2.01697543935533,1.20538905604795,2.19093027116212,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.289693037921647,2.3858578411533,0,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,2.43042584364528,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.993943903390637,1.01304409331664,9.00382429529888,1.43418310374407,1.06400514659507,0,0,2.96001058100592,0.622422070799533,3.23305612967251,1.30769522490767,1.36221684880438,1.72852777344,0.468642863667593,1.5608003841516,0,0.597794722207204,0.587172493218824,0.161872944368132,0.702254033511242,0.408308342509787,0.61417158655884,0.103325781175765,2.37600571456411,5.43987244412825,0,0,1.0100166837244,0.500474079487857,0,3.07284334616587,1.5324389789951,2.85452311922534,0.567160915800105,0.538168907066586,1.49490172172997,3.39091041855299,2.10063767259082,5.87399416659102,1.8034837803194,1.8611685633159,2.53164498361899,4.67697624773753,2.52433774244115,3.22174645248048,0.646584227275248,1.42003837006646,2.51880245569101,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,1.20097467208968,0,0,0,0,0.325808305310325,0,0,0,3.05262605013136,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.1466765716419,6.72212921940444,0,0,0.26593811658487,0,0.771622122786426,0,0.532844358032199,1.14382394926518,1.08524321078289,1.64648067356154,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0.958499421966331,0,1.42636905040718,3.04040744001916,0,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,1.08506009479894,0,0,0,0,3.61135319673263,0,0,1.99267679560631,3.68738337083406,1.12948698808508,0,0.686286847621712,0,0,0,0,1.66435439510497,0,4.46594054073798,2.76231551918512,5.05188169979532,1.15325234330131,6.14048698880044,2.89537058058494,5.93672265779964,3.39261326365842,3.72879623157567,2.87445046048332,5.71179872101983,3.25389059687886,0,0,0,1.49258782613989,4.00600569614778,2.36023946926963,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0.915694648183434,0.330037999682352,0,0,0,0.096670718292122,0,0.614014698904518,0.137836572484531,1.50388342815583,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,14.8750575775131,6.61105928344344,0.6970372701606,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,1.5743737541619,0,0.316379424718726,2.09693213316207,1.79128453917934,0.855877976067841,1.90921948755562,0.78494864019923,0.719489830333259,1.92175920815238,0.942499218765491,0.606547444719948,0,1.26377536871694,0.48763373908959,0.974853958525138,2.11300293513511,0.409499734223957,2.54529777516683,1.13008116620243,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,0.811641507850816,0.6196469961995,0,2.00775893085672,2.25972794330179,0.7133421029625,0.354761064070598,0,0.658589785919804,1.13841952129715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0.102268682502155,0,1.55519793830904,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0.320635281006135,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.249960815924213,0.454947352624943,0,0.235265819698172,0,0,7.61199494723058,5.60911943633339,2.77402930751307,4.54567212660214,3.27038272278348,4.44905610798268,3.20376095755693,2.7221566277383,6.52836242447678,3.40066844976158,1.75226443880073,4.04822800947244,2.63947026689641,1.65882483136342,6.38020114939188,3.1304703708704,0.150257608997218,0.380805212168795,1.22061219961398,3.27327586564607,1.18151612746737,0.9280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| ||
|short_description=p5@CTHRC1 | |short_description=p5@CTHRC1 | ||
}} | }} |
Latest revision as of 00:24, 25 September 2015
Short description: | p5@CTHRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTHRC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000297577, ENST00000520337_5end |
EntrezGene: | CTHRC1 |
HGNC: | 18831 |
UniProt: | F8WAA6G3V141 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.44e-30 | 76 |
multi fate stem cell | 2.15e-22 | 427 |
somatic stem cell | 1.11e-21 | 433 |
stem cell | 9.27e-21 | 441 |
preadipocyte | 9.22e-20 | 12 |
mesenchymal cell | 3.10e-15 | 354 |
connective tissue cell | 4.78e-15 | 361 |
motile cell | 2.02e-12 | 386 |
fat cell | 1.00e-11 | 15 |
skin fibroblast | 1.04e-10 | 23 |
cardiac mesenchymal cell | 8.39e-08 | 4 |
migratory trunk neural crest cell | 8.39e-08 | 4 |
vascular associated smooth muscle cell | 2.71e-07 | 32 |
smooth muscle cell | 3.83e-07 | 43 |
smooth muscle myoblast | 3.83e-07 | 43 |
muscle precursor cell | 4.27e-07 | 58 |
myoblast | 4.27e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.30e-15 | 371 |
integument | 1.79e-13 | 46 |
integumental system | 1.79e-13 | 46 |
adipose tissue | 4.02e-11 | 14 |
surface structure | 6.61e-10 | 99 |
omentum | 1.03e-09 | 6 |
peritoneum | 1.03e-09 | 6 |
abdominal cavity | 1.03e-09 | 6 |
visceral peritoneum | 1.03e-09 | 6 |
skin of body | 4.49e-09 | 41 |
hypodermis | 3.15e-08 | 5 |
systemic artery | 4.81e-08 | 33 |
systemic arterial system | 4.81e-08 | 33 |
epithelial vesicle | 1.28e-07 | 78 |
somite | 1.65e-07 | 71 |
presomitic mesoderm | 1.65e-07 | 71 |
presumptive segmental plate | 1.65e-07 | 71 |
dermomyotome | 1.65e-07 | 71 |
trunk paraxial mesoderm | 1.65e-07 | 71 |
splanchnic layer of lateral plate mesoderm | 2.38e-07 | 83 |
paraxial mesoderm | 2.55e-07 | 72 |
presumptive paraxial mesoderm | 2.55e-07 | 72 |
dense mesenchyme tissue | 3.88e-07 | 73 |
left ovary | 5.95e-07 | 4 |
aorta | 7.79e-07 | 21 |
aortic system | 7.79e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.23e-08 | 14 |