FFCP PHASE1:Hg19::chr11:89224638..89224649,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:89224638..89224649,- to FFCP PHASE1:Hg19::chr11:89224638..89224649,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50507 | |EntrezGene=50507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7891 | |HGNC=7891 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPH5,E7EMD7 | |UniProt=Q9NPH5,E7EMD7 | ||
|association_with_transcript=3bp_to_ENST00000263317,ENST00000535633,NM_001143836,NM_016931,NR_026571,uc001pct.2,uc001pcu.2,uc001pcv.2,uc001pcw.2,uc001pcx.2,uc001pcy.2,uc009yvo.2,uc009yvp.2,uc009yvs.1,uc010rtu.1_5end | |||
|cluster_id=chr11:89224638..89224649,- | |||
|coexpression_cluster_id=C1648 | |||
|description=CAGE_peak_6_at_NOX4_5end | |||
|id=chr11:89224638..89224649,- | |||
|ontology_enrichment_celltype=CL:0002139!3.07e-18!24;CL:0000071!3.74e-14!18;CL:0002546!3.74e-14!18;CL:0000222!4.34e-13!119;CL:0000115!6.44e-13!35;CL:0000055!1.44e-10!180;CL:0002078!8.12e-10!44;CL:0002543!5.13e-09!6;CL:0000220!1.26e-08!246;CL:0002321!2.11e-08!248;CL:0000393!9.08e-08!60;CL:0000211!9.08e-08!60;CL:0000213!1.77e-07!57;CL:0000215!1.77e-07!57;CL:0000359!2.59e-07!32;CL:0000680!5.91e-07!57;CL:0000056!5.91e-07!57;CL:0000355!5.91e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.85e-24;24!CL:0000071;2.70e-22;18!CL:0002543;3.61e-22;6!CL:0000064;2.82e-17;3!CL:0000067;2.82e-17;3!CL:0005012;2.82e-17;3!CL:0002304;2.82e-17;3!CL:0000115;9.42e-12;36!CL:0002144;6.09e-08;3!CL:0002579;6.09e-08;3!CL:0002605;1.11e-07;3!CL:0002618;1.11e-07;3!CL:0000213;1.42e-07;58!CL:0000215;1.42e-07;58!CL:0002078;3.16e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.65e-24,24;CL:0002543,2.87e-22,6;CL:0000071,3.05e-22,18;CL:0002546,3.05e-22,18;CL:0000064,3.08e-17,3;CL:0000067,3.08e-17,3;CL:0005012,3.08e-17,3;CL:0002304,3.08e-17,3;CL:0000115,1.76e-15,36;CL:0002078,5.90e-12,45;CL:0000222,7.15e-10,121;CL:0000213,8.35e-09,58;CL:0000215,8.35e-09,58;CL:0002579,4.54e-08,3;CL:0002144,6.43e-08,3;CL:0002605,8.19e-08,3;CL:0002618,1.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.70e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;8.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.36e-23!79;UBERON:0007798!3.36e-23!79;UBERON:0000055!1.52e-22!69;UBERON:0001981!2.30e-20!60;UBERON:0007500!2.30e-20!60;UBERON:0004537!2.30e-20!60;UBERON:0006965!2.30e-20!60;UBERON:0004872!7.79e-18!84;UBERON:0004535!4.56e-17!110;UBERON:0001009!4.67e-17!113;UBERON:0001986!3.74e-14!18;UBERON:0004638!3.74e-14!18;UBERON:0004852!3.74e-14!18;UBERON:0001637!3.27e-13!42;UBERON:0003509!3.27e-13!42;UBERON:0004572!3.27e-13!42;UBERON:0003914!1.44e-12!118;UBERON:0000487!1.15e-10!22;UBERON:0000025!7.16e-10!194;UBERON:0000119!1.52e-09!312;UBERON:0004573!8.07e-09!33;UBERON:0004571!8.07e-09!33;UBERON:0006914!8.21e-09!25;UBERON:0000483!1.23e-08!309;UBERON:0004111!4.81e-08!241;UBERON:0000490!6.37e-08!138;UBERON:0002385!9.70e-08!63;UBERON:0001015!9.70e-08!63;UBERON:0000383!9.70e-08!63;UBERON:0001134!1.50e-07!61;UBERON:0002036!1.50e-07!61;UBERON:0003082!1.50e-07!61;UBERON:0000947!1.81e-07!21;UBERON:0010191!1.81e-07!21;UBERON:0007625!2.94e-07!11;UBERON:0004290!7.32e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.70e-22;18!UBERON:0001986;2.70e-22;18!UBERON:0004852;2.70e-22;18!UBERON:0000487;5.88e-18;22!UBERON:0001778;2.82e-17;3!UBERON:0001775;2.82e-17;3!UBERON:0006914;1.29e-15;25!UBERON:0001638;1.04e-14;9!UBERON:0003920;1.04e-14;9!UBERON:0004582;1.04e-14;9!UBERON:0000490;1.09e-14;33!UBERON:0000488;4.41e-13;4!UBERON:0002049;1.88e-12;75!UBERON:0007798;1.88e-12;75!UBERON:0007500;3.06e-12;56!UBERON:0001981;3.06e-12;56!UBERON:0004537;3.06e-12;56!UBERON:0007625;3.83e-12;11!UBERON:0000055;2.72e-11;65!UBERON:0001801;1.77e-09;14!UBERON:0002203;7.25e-09;6!UBERON:0001768;7.25e-09;6!UBERON:0002200;7.25e-09;6!UBERON:0003914;1.09e-08;74!UBERON:0003688;1.60e-08;6!UBERON:0002358;1.60e-08;6!UBERON:0003684;1.60e-08;6!UBERON:0001178;1.60e-08;6!UBERON:0010523;6.09e-08;3!UBERON:0001915;6.09e-08;3!UBERON:0001982;6.09e-08;3!UBERON:0000025;2.64e-07;93!UBERON:0000019;6.66e-07;19!UBERON:0000047;6.66e-07;19!UBERON:0004088;6.66e-07;19!UBERON:0010230;6.66e-07;19!UBERON:0001637;7.74e-07;42!UBERON:0003509;7.74e-07;42!UBERON:0004572;7.74e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,8.43e-25,78;UBERON:0007798,8.43e-25,78;UBERON:0004638,3.05e-22,18;UBERON:0001986,3.05e-22,18;UBERON:0004852,3.05e-22,18;UBERON:0000055,1.25e-20,68;UBERON:0007500,5.77e-19,59;UBERON:0001981,5.77e-19,59;UBERON:0004537,5.77e-19,59;UBERON:0006965,5.77e-19,59;UBERON:0000487,6.49e-18,22;UBERON:0001778,3.08e-17,3;UBERON:0001775,3.08e-17,3;UBERON:0004535,2.09e-16,109;UBERON:0001009,7.66e-16,112;UBERON:0006914,1.41e-15,25;UBERON:0001638,8.97e-15,9;UBERON:0003920,8.97e-15,9;UBERON:0004582,8.97e-15,9;UBERON:0000488,4.71e-13,4;UBERON:0004872,1.78e-12,83;UBERON:0007625,4.32e-12,11;UBERON:0003914,2.25e-10,117;UBERON:0000490,1.49e-09,148;UBERON:0001801,1.94e-09,14;UBERON:0002203,7.57e-09,6;UBERON:0001768,7.57e-09,6;UBERON:0002200,7.57e-09,6;UBERON:0003688,1.45e-08,6;UBERON:0002358,1.45e-08,6;UBERON:0003684,1.45e-08,6;UBERON:0001178,1.45e-08,6;UBERON:0001637,2.45e-08,42;UBERON:0003509,2.45e-08,42;UBERON:0004572,2.45e-08,42;UBERON:0010523,6.43e-08,3;UBERON:0001915,6.43e-08,3;UBERON:0001982,6.43e-08,3;UBERON:0000483,2.67e-07,306;UBERON:0000025,3.41e-07,192;UBERON:0000119,3.58e-07,309;UBERON:0004573,9.25e-07,33;UBERON:0004571,9.25e-07,33 | |||
|phase1_expression=0.54503513781167,0,0.845726424575827,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0,0.204000691244253,0,1.71741592278634,0.958120975510189,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,2.26883561193763,4.43458794925128,4.47957407034943,1.37528029272598,0,0,0,0,0,0,0,0,2.38514888840046,0,0.347140501607594,0.56530794192401,0,0.825354125820202,1.04497483268405,0.775250277507987,0.35576626268671,2.00832367658802,1.20848795132744,2.28081631715554,0.24406205754817,0.367663080345869,0,0.803697554556718,1.79623498100936,1.0135033243499,6.13266549863533,4.74632829784064,2.5648244150257,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0.538842688278752,0.490385709340376,0,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0.292311015483596,0.504867548488229,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,2.34817388471643,0.866198686566443,0,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.07333828582095,0.646358578788889,0,0.845302752556,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,1.53512174720011,2.41280881715411,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.539107359730903,0,1.46139224653261,0.527758144464379,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0,0.656029291399411,0.650756789328606,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.214840489736547,0,0,0.178064071293475,0,0,0.255225424989168,0,0,0.31481234683064,0.6970372701606,0,0,1.73986598415015,1.66791797193528,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.608731130888112,1.54911749049875,0.563391205064483,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,0,0,0.409074730008619,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,1.09633539717401,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.446342914883745,0.0671834724867263,2.16179930125442,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,1.73372556058236,1.57363764404994,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.955780602982214,0,0,0,0,2.08698024724694,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.447421727191169,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0,0,0.437119121007915,0.470317296361523,0.245148321753905,0,0.392616934229891,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13549782351571,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0.143444410785353,0,0.488419611665847,0,0,0,0,0.488965776731466,0,0,0,0 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| ||
|short_description=p6@NOX4 | |||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p6@NOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NOX4_5end |
Coexpression cluster: | C1648_Adipocyte_Ciliary_Endothelial_Smooth_aorta_kidney_hepatic |
Association with transcript: | 3bp_to_ENST00000263317, ENST00000535633, NM_001143836, NM_016931, NR_026571, uc001pct.2, uc001pcu.2, uc001pcv.2, uc001pcw.2, uc001pcx.2, uc001pcy.2, uc009yvo.2, uc009yvp.2, uc009yvs.1, uc010rtu.1_5end |
EntrezGene: | NOX4 |
HGNC: | 7891 |
UniProt: | Q9NPH5E7EMD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.65e-24 | 24 |
vein endothelial cell | 2.87e-22 | 6 |
blood vessel endothelial cell | 3.05e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.05e-22 | 18 |
ciliated cell | 3.08e-17 | 3 |
ciliated epithelial cell | 3.08e-17 | 3 |
multi-ciliated epithelial cell | 3.08e-17 | 3 |
non-pigmented ciliary epithelial cell | 3.08e-17 | 3 |
endothelial cell | 1.76e-15 | 36 |
meso-epithelial cell | 5.90e-12 | 45 |
mesodermal cell | 7.15e-10 | 121 |
lining cell | 8.35e-09 | 58 |
barrier cell | 8.35e-09 | 58 |
omentum preadipocyte | 4.54e-08 | 3 |
capillary endothelial cell | 6.43e-08 | 3 |
astrocyte of the cerebral cortex | 8.19e-08 | 3 |
endothelial cell of umbilical vein | 1.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.67e-07 | 1 |