FFCP PHASE1:Hg19::chr11:108369101..108369157,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143888 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28496 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z4H8 | |||
|association_with_transcript=1bp_to_ENST00000323468,NM_153705,uc001pkj.2_5end | |||
|cluster_id=chr11:108369101..108369157,- | |||
|description=CAGE_peak_1_at_KDELC2_5end | |||
|id=chr11:108369101..108369157,- | |||
|ontology_enrichment_celltype=CL:0000055!4.91e-27!180;CL:0000057!9.89e-16!75;CL:0002620!3.63e-08!23;CL:0000680!3.26e-07!57;CL:0000056!3.26e-07!57;CL:0000355!3.26e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.05e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.40e-16,76;CL:0002620,3.59e-08,23;CL:0000680,1.33e-07,58;CL:0000056,1.33e-07,58;CL:0000355,1.33e-07,58;CL:0000187,6.39e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.11e-11!143;UBERON:0002100!1.24e-11!216;UBERON:0003104!2.55e-11!238;UBERON:0009142!2.55e-11!238;UBERON:0000914!7.70e-11!83;UBERON:0002329!7.70e-11!83;UBERON:0003077!7.70e-11!83;UBERON:0003059!7.70e-11!83;UBERON:0007282!7.70e-11!83;UBERON:0009618!7.70e-11!83;UBERON:0007285!7.70e-11!83;UBERON:0004290!4.65e-09!70;UBERON:0000490!3.18e-08!138;UBERON:0000486!4.60e-08!82;UBERON:0003102!1.18e-07!95;UBERON:0002385!3.31e-07!63;UBERON:0001015!3.31e-07!63;UBERON:0000383!3.31e-07!63;UBERON:0000475!4.22e-07!365;UBERON:0001134!4.97e-07!61;UBERON:0002036!4.97e-07!61;UBERON:0003082!4.97e-07!61;UBERON:0004923!9.61e-07!57;UBERON:0000481!9.64e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.77e-14,160;UBERON:0009142,9.77e-14,160;UBERON:0005256,5.48e-11,122;UBERON:0000490,2.92e-10,148;UBERON:0002100,7.40e-10,199;UBERON:0007524,1.79e-09,73;UBERON:0002329,1.83e-09,71;UBERON:0003059,1.83e-09,71;UBERON:0007282,1.83e-09,71;UBERON:0004290,1.83e-09,71;UBERON:0009618,1.83e-09,71;UBERON:0003077,4.76e-09,72;UBERON:0007285,4.76e-09,72;UBERON:0000486,2.03e-08,83;UBERON:0007503,7.62e-08,78;UBERON:0003102,1.21e-07,99;UBERON:0002385,1.39e-07,64;UBERON:0001015,1.39e-07,64;UBERON:0000383,1.39e-07,64;UBERON:0001134,2.09e-07,62;UBERON:0002036,2.09e-07,62;UBERON:0003082,2.09e-07,62;UBERON:0004923,4.44e-07,66;UBERON:0002199,5.84e-07,46;UBERON:0002416,5.84e-07,46 | |||
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| |||
|short_description=p1@KDELC2 | |||
}} |
Latest revision as of 23:53, 24 September 2015
Short description: | p1@KDELC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDELC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000323468, NM_153705, uc001pkj.2_5end |
EntrezGene: | KDELC2 |
HGNC: | 28496 |
UniProt: | Q7Z4H8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.40e-16 | 76 |
skin fibroblast | 3.59e-08 | 23 |
muscle precursor cell | 1.33e-07 | 58 |
myoblast | 1.33e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-07 | 58 |
muscle cell | 6.39e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.77e-14 | 160 |
entire embryonic mesenchyme | 9.77e-14 | 160 |
trunk mesenchyme | 5.48e-11 | 122 |
unilaminar epithelium | 2.92e-10 | 148 |
trunk | 7.40e-10 | 199 |
dense mesenchyme tissue | 1.79e-09 | 73 |
somite | 1.83e-09 | 71 |
presomitic mesoderm | 1.83e-09 | 71 |
presumptive segmental plate | 1.83e-09 | 71 |
dermomyotome | 1.83e-09 | 71 |
trunk paraxial mesoderm | 1.83e-09 | 71 |
paraxial mesoderm | 4.76e-09 | 72 |
presumptive paraxial mesoderm | 4.76e-09 | 72 |
multilaminar epithelium | 2.03e-08 | 83 |
epithelial vesicle | 7.62e-08 | 78 |
surface structure | 1.21e-07 | 99 |
muscle tissue | 1.39e-07 | 64 |
musculature | 1.39e-07 | 64 |
musculature of body | 1.39e-07 | 64 |
skeletal muscle tissue | 2.09e-07 | 62 |
striated muscle tissue | 2.09e-07 | 62 |
myotome | 2.09e-07 | 62 |
organ component layer | 4.44e-07 | 66 |
integument | 5.84e-07 | 46 |
integumental system | 5.84e-07 | 46 |