FFCP PHASE1:Hg19::chr3:13590619..13590632,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:13590619..13590632,+ to FFCP PHASE1:Hg19::chr3:13590619..13590632,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2199 | |EntrezGene=2199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3601 | |HGNC=3601 | ||
|TSSclassifier=strong | |||
|UniProt=P98095,Q86V58,Q9Y3V7 | |UniProt=P98095,Q86V58,Q9Y3V7 | ||
|association_with_transcript=0bp_to_ENST00000404922,NM_001004019,NM_001998,uc011ava.1,uc011avb.1_5end | |||
|cluster_id=chr3:13590619..13590632,+ | |||
|coexpression_cluster_id=C943 | |||
|description=CAGE_peak_2_at_FBLN2_5end | |||
|id=chr3:13590619..13590632,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.94e-20!180;CL:0000057!1.07e-16!75;CL:0000136!3.73e-10!15;CL:0000680!1.71e-08!57;CL:0000056!1.71e-08!57;CL:0000355!1.71e-08!57;CL:0000187!2.74e-08!54;CL:0000183!3.29e-08!59;CL:0000393!5.18e-08!60;CL:0000211!5.18e-08!60;CL:0002494!1.51e-07!16;CL:0002334!1.79e-07!12;CL:0002620!4.70e-07!23;CL:0000192!8.83e-07!42;CL:0000514!8.83e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.70e-10;13!CL:0002494;2.54e-08;16!CL:0002334;3.93e-08;12!CL:0000057;2.48e-07;73!CL:0002620;4.11e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.64e-18,76;CL:0000136,3.78e-11,15;CL:0002494,3.04e-08,16;CL:0000680,3.54e-08,58;CL:0000056,3.54e-08,58;CL:0000355,3.54e-08,58;CL:0002334,3.69e-08,12;CL:0000187,6.15e-08,55;CL:0000393,2.69e-07,61;CL:0000211,2.69e-07,61;CL:0002620,3.68e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.45e-11!365;UBERON:0007100!4.92e-11!27;UBERON:0000948!1.66e-10!24;UBERON:0005498!1.66e-10!24;UBERON:0004140!1.66e-10!24;UBERON:0009881!1.66e-10!24;UBERON:0004141!1.66e-10!24;UBERON:0003084!1.66e-10!24;UBERON:0007005!1.66e-10!24;UBERON:0004139!1.66e-10!24;UBERON:0004291!1.66e-10!24;UBERON:0004290!1.41e-09!70;UBERON:0002385!1.99e-09!63;UBERON:0001015!1.99e-09!63;UBERON:0000383!1.99e-09!63;UBERON:0001134!4.37e-09!61;UBERON:0002036!4.37e-09!61;UBERON:0003082!4.37e-09!61;UBERON:0004923!8.77e-09!57;UBERON:0000914!1.04e-08!83;UBERON:0002329!1.04e-08!83;UBERON:0003077!1.04e-08!83;UBERON:0003059!1.04e-08!83;UBERON:0007282!1.04e-08!83;UBERON:0009618!1.04e-08!83;UBERON:0007285!1.04e-08!83;UBERON:0001013!1.89e-08!14;UBERON:0004872!2.21e-08!84;UBERON:0000486!3.18e-08!82;UBERON:0000481!1.03e-07!347;UBERON:0003102!8.84e-07!95;UBERON:0001009!9.51e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.97e-11;25!UBERON:0000948;1.12e-10;22!UBERON:0001013;3.44e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.95e-12,27;UBERON:0000948,1.53e-11,24;UBERON:0005498,1.53e-11,24;UBERON:0004140,1.53e-11,24;UBERON:0009881,1.53e-11,24;UBERON:0004141,1.53e-11,24;UBERON:0003084,1.53e-11,24;UBERON:0007005,1.53e-11,24;UBERON:0004139,1.53e-11,24;UBERON:0004291,1.53e-11,24;UBERON:0001013,3.00e-09,14;UBERON:0002385,3.37e-09,64;UBERON:0001015,3.37e-09,64;UBERON:0000383,3.37e-09,64;UBERON:0007524,5.15e-09,73;UBERON:0002329,5.86e-09,71;UBERON:0003059,5.86e-09,71;UBERON:0007282,5.86e-09,71;UBERON:0004290,5.86e-09,71;UBERON:0009618,5.86e-09,71;UBERON:0004923,6.59e-09,66;UBERON:0001134,7.96e-09,62;UBERON:0002036,7.96e-09,62;UBERON:0003082,7.96e-09,62;UBERON:0003077,1.36e-08,72;UBERON:0007285,1.36e-08,72;UBERON:0004872,1.02e-07,83;UBERON:0000486,2.46e-07,83;UBERON:0007503,5.08e-07,78;UBERON:0002199,7.32e-07,46;UBERON:0002416,7.32e-07,46 | |||
|phase1_expression=69.5828192606232,62.0891519283851,76.3972870200164,92.06743448488,99.2253629628579,75.0211130726317,25.3299878168311,28.4273943042074,55.1101675501659,0.737201809504527,0.697801167972428,5.02415155899396,9.23184423799587,2.97039247104112,4.97096063591874,2.6893005858071,1.80808358407193,0.730310090387373,0.487932798790507,15.2670112015217,12.8520435483879,13.7920077450359,0.572471974262113,1.23186982565596,0.753255837568817,0,0,0,0,0,1.23852898652861,0,0.30120591877825,0,0,0,1.17440175733939,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0,0.800791974072025,0,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,1.52909291250092,0,1.68152568894461,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0.80642697289893,0,1.73789284659359,41.4471672733735,26.8280343881454,26.4675503016108,16.9876401620746,15.5414752297126,13.4707262633566,1.5905718941022,3.40644409211845,6.61743720148475,3.99112915432615,6.4119393555982,7.59678637886733,0.728590576585084,0.741568885568859,0.324547393654683,0,0,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0.775250277507987,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.898117490504679,0.112611480483322,0,0,0.183201743930407,0,0,3.05265836499774,8.94549513051573,13.9293562831038,32.8374768416783,167.512586517307,23.4081132250916,30.2765904076846,9.60740961567345,16.0333906471154,21.4735614425839,4.04132016209064,4.7403951902903,14.6816704815583,26.5040925260799,4.92075006850973,0.936480230490962,0,3.28787097213962,1.76151747965647,1.45685649931318,0.561803226808994,3.67477508258808,1.10550885580591,10.2292523364008,8.31602000097437,14.0942149688777,7.28129089550421,22.9957805381196,0.841680569770331,0.625592599359821,1.93944880838928,0,2.75839016219118,7.06118876861005,8.16711718752151,49.5115394501259,36.518313487975,30.942057569296,56.1170349677832,18.2402976752037,60.0302458306316,40.7595915366182,53.5020973204814,23.6771922541713,50.739188623067,37.0040592542043,42.0279747728911,83.782263833921,18.9413944667964,8.64759020783487,0.57978255948989,0,0.286804595389004,3.04934265323988,1.45782745153634,5.11253348625881,4.66474747569167,2.52320850875628,2.18986415445498,20.3384392028761,78.475394459532,8.28809528114883,17.1816133371832,19.4907460050788,0,0,0,0,0,0,0,0,0,0,12.6217596423101,22.636570623227,51.4530489849397,0,0,2.36315962672562,0,0.860919069801795,9.09309394582185,0.329250856225877,0,0.100528972411631,3.05541869023148,1.3032332212413,0,8.6598805215164,6.60803308357938,9.97973901004484,0.433099343283221,0,2.28304982681518,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.264145302039678,0.829312462163088,0.576479813667846,0.50496973370552,0.253991577168676,0,0,6.84289784090821,0.308482478109971,0,0,3.92458795208763,18.746282959831,4.1069440059732,11.1173675551689,253.936076554837,6.762422020448,8.77595784730073,1.04007436911366,0.257207374262142,0,0.266422179016099,8.14974563851441,34.1851611396609,9.87888404136923,2.93162565864362,10.6617584622764,5.543663110534,55.4648453789638,17.4306691720059,49.7865496086644,0,0,0,10.5434936416296,13.7834323000937,0,3.4747513600219,1.43833425785268,3.58121926479791,0,0.394061520403854,0.431255149719035,0.513372145118994,2.54094624222463,0,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,8.34302143690151,1.00034104211935,0.813795071099207,17.4695523685878,19.4487597788906,17.3472656537328,14.4083940441037,8.42649079237613,2.27407504055985,35.1808442394517,3.32112799267718,4.60922921354258,15.2046325319145,47.579681263446,35.0006292287073,0.206768026122887,0.215714200818617,0.74709290462411,3.33440328590885,9.98612637062982,28.4246875729899,69.2220783814387,59.2363216891921,61.7452207752762,94.9511095984744,49.6356031594702,73.349388041485,142.481343787191,3.54682295746108,17.2234873553733,7.96633413333949,11.4235974420397,10.6913548183163,2.29632954224082,0,0.276242966807689,2.75554675595056,1.27463817604702,1.57349297951309,0.451199612907412,0,0.784349769176855,0,0.422206515571503,0,0,0.647747748306418,0,0,2.00675909541941,0,0.831076008928724,0.671624264166535,0,0,7.69350375349168,23.6170544903788,11.3882438132506,3.60643540767028,2.56394501491362,2.47528499761764,1.72279661398852,0,22.4957501781823,3.19013370364003,1.69453478826109,3.22357716924872,1.24052915236078,6.1229539574916,5.65565106265491,2.13066568540252,7.03353081609225,0.330569830721956,0.384380134730212,0.127612712494584,0.30347334256665,0.929691098594572,88.1474571125792,0.6970372701606,6.16067160352178,7.45228442443831,3.47973196830029,1.11194531462352,4.57999637574372,14.1420180356674,10.1241415909992,12.7722229928963,17.6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| |phase1_expression=69.5828192606232,62.0891519283851,76.3972870200164,92.06743448488,99.2253629628579,75.0211130726317,25.3299878168311,28.4273943042074,55.1101675501659,0.737201809504527,0.697801167972428,5.02415155899396,9.23184423799587,2.97039247104112,4.97096063591874,2.6893005858071,1.80808358407193,0.730310090387373,0.487932798790507,15.2670112015217,12.8520435483879,13.7920077450359,0.572471974262113,1.23186982565596,0.753255837568817,0,0,0,0,0,1.23852898652861,0,0.30120591877825,0,0,0,1.17440175733939,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0,0.800791974072025,0,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,1.52909291250092,0,1.68152568894461,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0.80642697289893,0,1.73789284659359,41.4471672733735,26.8280343881454,26.4675503016108,16.9876401620746,15.5414752297126,13.4707262633566,1.5905718941022,3.40644409211845,6.61743720148475,3.99112915432615,6.4119393555982,7.59678637886733,0.728590576585084,0.741568885568859,0.324547393654683,0,0,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0.775250277507987,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.898117490504679,0.112611480483322,0,0,0.183201743930407,0,0,3.05265836499774,8.94549513051573,13.9293562831038,32.8374768416783,167.512586517307,23.4081132250916,30.2765904076846,9.60740961567345,16.0333906471154,21.4735614425839,4.04132016209064,4.7403951902903,14.6816704815583,26.5040925260799,4.92075006850973,0.936480230490962,0,3.28787097213962,1.76151747965647,1.45685649931318,0.561803226808994,3.67477508258808,1.10550885580591,10.2292523364008,8.31602000097437,14.0942149688777,7.28129089550421,22.9957805381196,0.841680569770331,0.625592599359821,1.93944880838928,0,2.75839016219118,7.06118876861005,8.16711718752151,49.5115394501259,36.518313487975,30.942057569296,56.1170349677832,18.2402976752037,60.0302458306316,40.7595915366182,53.5020973204814,23.6771922541713,50.739188623067,37.0040592542043,42.0279747728911,83.782263833921,18.9413944667964,8.64759020783487,0.57978255948989,0,0.286804595389004,3.04934265323988,1.45782745153634,5.11253348625881,4.66474747569167,2.52320850875628,2.18986415445498,20.3384392028761,78.475394459532,8.28809528114883,17.1816133371832,19.4907460050788,0,0,0,0,0,0,0,0,0,0,12.6217596423101,22.636570623227,51.4530489849397,0,0,2.36315962672562,0,0.860919069801795,9.09309394582185,0.329250856225877,0,0.100528972411631,3.05541869023148,1.3032332212413,0,8.6598805215164,6.60803308357938,9.97973901004484,0.433099343283221,0,2.28304982681518,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.264145302039678,0.829312462163088,0.576479813667846,0.50496973370552,0.253991577168676,0,0,6.84289784090821,0.308482478109971,0,0,3.92458795208763,18.746282959831,4.1069440059732,11.1173675551689,253.936076554837,6.762422020448,8.77595784730073,1.04007436911366,0.257207374262142,0,0.266422179016099,8.14974563851441,34.1851611396609,9.87888404136923,2.93162565864362,10.6617584622764,5.543663110534,55.4648453789638,17.4306691720059,49.7865496086644,0,0,0,10.5434936416296,13.7834323000937,0,3.4747513600219,1.43833425785268,3.58121926479791,0,0.394061520403854,0.431255149719035,0.513372145118994,2.54094624222463,0,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,8.34302143690151,1.00034104211935,0.813795071099207,17.4695523685878,19.4487597788906,17.3472656537328,14.4083940441037,8.42649079237613,2.27407504055985,35.1808442394517,3.32112799267718,4.60922921354258,15.2046325319145,47.579681263446,35.0006292287073,0.206768026122887,0.215714200818617,0.74709290462411,3.33440328590885,9.98612637062982,28.4246875729899,69.2220783814387,59.2363216891921,61.7452207752762,94.9511095984744,49.6356031594702,73.349388041485,142.481343787191,3.54682295746108,17.2234873553733,7.96633413333949,11.4235974420397,10.6913548183163,2.29632954224082,0,0.276242966807689,2.75554675595056,1.27463817604702,1.57349297951309,0.451199612907412,0,0.784349769176855,0,0.422206515571503,0,0,0.647747748306418,0,0,2.00675909541941,0,0.831076008928724,0.671624264166535,0,0,7.69350375349168,23.6170544903788,11.3882438132506,3.60643540767028,2.56394501491362,2.47528499761764,1.72279661398852,0,22.4957501781823,3.19013370364003,1.69453478826109,3.22357716924872,1.24052915236078,6.1229539574916,5.65565106265491,2.13066568540252,7.03353081609225,0.330569830721956,0.384380134730212,0.127612712494584,0.30347334256665,0.929691098594572,88.1474571125792,0.6970372701606,6.16067160352178,7.45228442443831,3.47973196830029,1.11194531462352,4.57999637574372,14.1420180356674,10.1241415909992,12.7722229928963,17.6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| ||
|short_description=p2@FBLN2 | |||
}} | }} |
Latest revision as of 23:34, 24 September 2015
Short description: | p2@FBLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FBLN2_5end |
Coexpression cluster: | C943_Mesenchymal_Preadipocyte_Fibroblast_Adipocyte_Synoviocyte_Hair_Mesothelial |
Association with transcript: | 0bp_to_ENST00000404922, NM_001004019, NM_001998, uc011ava.1, uc011avb.1_5end |
EntrezGene: | FBLN2 |
HGNC: | 3601 |
UniProt: | P98095Q86V58Q9Y3V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.64e-18 | 76 |
fat cell | 3.78e-11 | 15 |
cardiocyte | 3.04e-08 | 16 |
muscle precursor cell | 3.54e-08 | 58 |
myoblast | 3.54e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.54e-08 | 58 |
preadipocyte | 3.69e-08 | 12 |
muscle cell | 6.15e-08 | 55 |
electrically responsive cell | 2.69e-07 | 61 |
electrically active cell | 2.69e-07 | 61 |
skin fibroblast | 3.68e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.95e-12 | 27 |
heart | 1.53e-11 | 24 |
primitive heart tube | 1.53e-11 | 24 |
primary heart field | 1.53e-11 | 24 |
anterior lateral plate mesoderm | 1.53e-11 | 24 |
heart tube | 1.53e-11 | 24 |
heart primordium | 1.53e-11 | 24 |
cardiac mesoderm | 1.53e-11 | 24 |
cardiogenic plate | 1.53e-11 | 24 |
heart rudiment | 1.53e-11 | 24 |
adipose tissue | 3.00e-09 | 14 |
muscle tissue | 3.37e-09 | 64 |
musculature | 3.37e-09 | 64 |
musculature of body | 3.37e-09 | 64 |
dense mesenchyme tissue | 5.15e-09 | 73 |
somite | 5.86e-09 | 71 |
presomitic mesoderm | 5.86e-09 | 71 |
presumptive segmental plate | 5.86e-09 | 71 |
dermomyotome | 5.86e-09 | 71 |
trunk paraxial mesoderm | 5.86e-09 | 71 |
organ component layer | 6.59e-09 | 66 |
skeletal muscle tissue | 7.96e-09 | 62 |
striated muscle tissue | 7.96e-09 | 62 |
myotome | 7.96e-09 | 62 |
paraxial mesoderm | 1.36e-08 | 72 |
presumptive paraxial mesoderm | 1.36e-08 | 72 |
splanchnic layer of lateral plate mesoderm | 1.02e-07 | 83 |
multilaminar epithelium | 2.46e-07 | 83 |
epithelial vesicle | 5.08e-07 | 78 |
integument | 7.32e-07 | 46 |
integumental system | 7.32e-07 | 46 |