FFCP PHASE1:Hg19::chr2:223288927..223288960,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:223288927..223288960,+
|short_description=p10@SGPP2
|description=CAGE_peak_10_at_SGPP2_5end
|association_with_transcript=-275bp_to_ENST00000321276_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=-275bp_to_ENST00000321276_5end | |||
|cluster_id=chr2:223288927..223288960,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_SGPP2_5end | |||
|id=chr2:223288927..223288960,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.19e-17!42;CL:0000860!1.16e-15!45;CL:0002009!7.98e-12!65;CL:0002194!2.36e-11!63;CL:0000576!2.36e-11!63;CL:0000040!2.36e-11!63;CL:0000559!2.36e-11!63;CL:0000557!4.15e-10!71;CL:0000839!2.08e-09!70;CL:0002087!2.65e-08!119;CL:0000766!4.69e-08!76;CL:0002031!3.95e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.65e-55;33!CL:0002057;7.65e-55;33!CL:0000473;8.12e-39;39!CL:0000234;8.12e-39;39!CL:0000576;5.08e-33;48!CL:0000766;7.75e-23;69!CL:0002087;1.01e-12;104!CL:0002393;1.87e-12;6!CL:0002397;1.87e-12;6!CL:0000763;4.91e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.31e-65,42;CL:0002057,1.31e-65,42;CL:0000473,5.12e-57,48;CL:0000234,5.12e-57,48;CL:0002194,5.54e-45,59;CL:0000576,5.54e-45,59;CL:0000040,5.54e-45,59;CL:0000559,5.54e-45,59;CL:0002009,1.98e-43,61;CL:0000839,5.98e-40,66;CL:0000557,2.58e-39,67;CL:0000766,2.11e-36,72;CL:0002087,3.29e-24,115;CL:0000763,2.67e-23,108;CL:0000049,2.67e-23,108;CL:0002031,4.56e-23,120;CL:0000738,5.68e-20,136;CL:0002032,2.36e-16,161;CL:0000837,2.36e-16,161;CL:0000037,1.57e-15,168;CL:0000988,1.44e-14,177;CL:0002393,1.88e-08,9;CL:0002397,1.88e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-47;42!UBERON:0005425;1.49e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.04e-24!115;UBERON:0001049!4.61e-22!57;UBERON:0005068!4.61e-22!57;UBERON:0006241!4.61e-22!57;UBERON:0007135!4.61e-22!57;UBERON:0002780!6.90e-21!41;UBERON:0001890!6.90e-21!41;UBERON:0006240!6.90e-21!41;UBERON:0003080!3.51e-20!42;UBERON:0002616!1.28e-19!59;UBERON:0000955!2.14e-18!69;UBERON:0006238!2.14e-18!69;UBERON:0001893!3.82e-17!34;UBERON:0002791!2.99e-16!33;UBERON:0002020!6.93e-16!34;UBERON:0003528!6.93e-16!34;UBERON:0001017!8.73e-16!82;UBERON:0001869!2.04e-15!32;UBERON:0003056!3.06e-15!61;UBERON:0000073!1.09e-14!94;UBERON:0001016!1.09e-14!94;UBERON:0005743!1.61e-14!86;UBERON:0003075!2.20e-14!86;UBERON:0007284!2.20e-14!86;UBERON:0002346!3.07e-13!90;UBERON:0002619!1.05e-12!22;UBERON:0000153!3.47e-12!129;UBERON:0007811!3.47e-12!129;UBERON:0000033!5.27e-12!123;UBERON:0000956!5.27e-12!25;UBERON:0000203!5.27e-12!25;UBERON:0001950!1.84e-10!20;UBERON:0000062!2.08e-09!511;UBERON:0002390!1.56e-08!102;UBERON:0003061!1.56e-08!102;UBERON:0000349!3.57e-08!5;UBERON:0002193!3.73e-08!112;UBERON:0002371!4.62e-08!80;UBERON:0000200!6.12e-08!6;UBERON:0002420!1.64e-07!9;UBERON:0007245!1.64e-07!9;UBERON:0010009!1.64e-07!9;UBERON:0010011!1.64e-07!9;UBERON:0000454!1.64e-07!9;UBERON:0001474!5.76e-07!86;UBERON:0004121!6.11e-07!169;UBERON:0000467!6.78e-07!625;UBERON:0000480!7.81e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.49e-09;1!UBERON:0001785;1.49e-09;1!UBERON:0002464;1.49e-09;1!UBERON:0004904;1.49e-09;1!UBERON:0001021;1.49e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.42e-34,76;UBERON:0001474,1.26e-31,82;UBERON:0004765,1.47e-28,90;UBERON:0002405,1.52e-27,93;UBERON:0002390,5.49e-26,98;UBERON:0003061,5.49e-26,98;UBERON:0001434,2.09e-25,100;UBERON:0002193,2.67e-23,108;UBERON:0002204,6.12e-14,167;UBERON:0003081,7.06e-11,203;UBERON:0000941,1.43e-09,1;UBERON:0001785,1.43e-09,1;UBERON:0002464,1.43e-09,1;UBERON:0004904,1.43e-09,1;UBERON:0001021,1.43e-09,1;UBERON:0003902,1.43e-09,1;UBERON:0005425,1.43e-09,1 | |||
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|short_description=p10@SGPP2 | |||
}} | }} |
Latest revision as of 23:28, 24 September 2015
Short description: | p10@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -275bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.31e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-65 | 42 |
defensive cell | 5.12e-57 | 48 |
phagocyte | 5.12e-57 | 48 |
monopoietic cell | 5.54e-45 | 59 |
monocyte | 5.54e-45 | 59 |
monoblast | 5.54e-45 | 59 |
promonocyte | 5.54e-45 | 59 |
macrophage dendritic cell progenitor | 1.98e-43 | 61 |
myeloid lineage restricted progenitor cell | 5.98e-40 | 66 |
granulocyte monocyte progenitor cell | 2.58e-39 | 67 |
myeloid leukocyte | 2.11e-36 | 72 |
nongranular leukocyte | 3.29e-24 | 115 |
myeloid cell | 2.67e-23 | 108 |
common myeloid progenitor | 2.67e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 4.56e-23 | 120 |
leukocyte | 5.68e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.36e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-16 | 161 |
hematopoietic stem cell | 1.57e-15 | 168 |
hematopoietic cell | 1.44e-14 | 177 |
intermediate monocyte | 1.88e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.88e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.42e-34 | 76 |
bone element | 1.26e-31 | 82 |
skeletal element | 1.47e-28 | 90 |
immune system | 1.52e-27 | 93 |
hematopoietic system | 5.49e-26 | 98 |
blood island | 5.49e-26 | 98 |
skeletal system | 2.09e-25 | 100 |
hemolymphoid system | 2.67e-23 | 108 |
musculoskeletal system | 6.12e-14 | 167 |
lateral plate mesoderm | 7.06e-11 | 203 |
cranial nerve II | 1.43e-09 | 1 |
cranial nerve | 1.43e-09 | 1 |
nerve trunk | 1.43e-09 | 1 |
nerve connecting eye with brain | 1.43e-09 | 1 |
nerve | 1.43e-09 | 1 |
retinal neural layer | 1.43e-09 | 1 |
presumptive neural retina | 1.43e-09 | 1 |