FFCP PHASE1:Hg19::chr19:821910..821921,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79948 | |EntrezGene=79948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38319 | |HGNC=38319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000520876_5end | |association_with_transcript=29bp_to_ENST00000520876_5end | ||
|cluster_id=chr19:821910..821921,- | |||
|description=CAGE_peak_9_at_MIR3187_5end | |description=CAGE_peak_9_at_MIR3187_5end | ||
|id=chr19:821910..821921,- | |id=chr19:821910..821921,- | ||
|ontology_enrichment_celltype=CL:0000540!2.80e-14!6;CL:0000031!2.80e-14!6;CL:0000404!2.80e-14!6;CL:0000047!3.00e-14!8;CL:0002322!3.99e-12!5;CL:0002319!4.58e-08!25;CL:0000133!2.00e-07!59 | |ontology_enrichment_celltype=CL:0000540!2.80e-14!6;CL:0000031!2.80e-14!6;CL:0000404!2.80e-14!6;CL:0000047!3.00e-14!8;CL:0002322!3.99e-12!5;CL:0002319!4.58e-08!25;CL:0000133!2.00e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.92e-15;5!CL:0000540;1.68e-13;6!CL:0000404;1.68e-13;6!CL:0002553;1.68e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.82e-17,8;CL:0002322,3.30e-15,5;CL:0000540,1.95e-13,6;CL:0000031,1.95e-13,6;CL:0000404,1.95e-13,6;CL:0002553,1.15e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000031;1.68e-13;6 | |||
|ontology_enrichment_disease=DOID:8692!1.57e-11!31;DOID:3095!1.67e-09!22;DOID:2994!1.67e-09!22;DOID:1240!1.97e-08!39;DOID:171!5.44e-07!10 | |ontology_enrichment_disease=DOID:8692!1.57e-11!31;DOID:3095!1.67e-09!22;DOID:2994!1.67e-09!22;DOID:1240!1.97e-08!39;DOID:171!5.44e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.99e-16;31!DOID:225;5.54e-10;1!DOID:1240;2.16e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.67e-16,31;DOID:1240,9.56e-13,39;DOID:225,5.79e-10,1;DOID:2531,1.68e-09,51;DOID:0060083,1.68e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.37e-16!94;UBERON:0001016!4.37e-16!94;UBERON:0005743!9.92e-14!86;UBERON:0001017!1.48e-13!82;UBERON:0000924!3.83e-13!173;UBERON:0006601!3.83e-13!173;UBERON:0004121!4.94e-12!169;UBERON:0002346!3.18e-11!90;UBERON:0003075!5.10e-10!86;UBERON:0007284!5.10e-10!86;UBERON:0001869!4.79e-09!32;UBERON:0002619!7.41e-09!22;UBERON:0001893!2.40e-08!34;UBERON:0003056!3.36e-08!61;UBERON:0001950!3.81e-08!20;UBERON:0001049!5.43e-08!57;UBERON:0005068!5.43e-08!57;UBERON:0006241!5.43e-08!57;UBERON:0007135!5.43e-08!57;UBERON:0002616!1.45e-07!59;UBERON:0000956!1.46e-07!25;UBERON:0000203!1.46e-07!25;UBERON:0002780!1.60e-07!41;UBERON:0001890!1.60e-07!41;UBERON:0006240!1.60e-07!41;UBERON:0000955!1.75e-07!69;UBERON:0006238!1.75e-07!69;UBERON:0002791!1.90e-07!33;UBERON:0003080!2.87e-07!42;UBERON:0002020!3.74e-07!34;UBERON:0003528!3.74e-07!34;UBERON:0002369!5.99e-07!3;UBERON:0001235!5.99e-07!3;UBERON:0006858!5.99e-07!3;UBERON:0000013!7.82e-07!5;UBERON:0002410!7.82e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.12e-09;49!UBERON:0002021;1.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.36e-07,5;UBERON:0001017,7.89e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.795178609928912,1.16193942869518,1.55491582523056,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,3.09315525111078,2.34522771468088,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,8.44017044713844,0.842391534340376,0.684704037099577,2.97691801968744,0,0,1.2847046008296,1.21079824314629,0.425846237690326,0,3.37964840739304,2.90778940260141,4.0043794010858,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.643012593860077,0.687697182986169,0.415440338029185,0,0,0.121499113316049,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.248385611765534,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20075189082423,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0.109209638192014,0,0.212574920101683,0.495743057036009,0.558644917973244,0,0,1.60114149657094,0,0,0.192687675289379,1.41696576325585,0,0.205116364240755,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,3.49080552272302,0,0,0,0,0,0.437062287854782,0,0.203977659483963,0.534434810531121,0,0.752122617877125,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.795178609928912,1.16193942869518,1.55491582523056,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,3.09315525111078,2.34522771468088,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,8.44017044713844,0.842391534340376,0.684704037099577,2.97691801968744,0,0,1.2847046008296,1.21079824314629,0.425846237690326,0,3.37964840739304,2.90778940260141,4.0043794010858,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.643012593860077,0.687697182986169,0.415440338029185,0,0,0.121499113316049,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.248385611765534,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20075189082423,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0.109209638192014,0,0.212574920101683,0.495743057036009,0.558644917973244,0,0,1.60114149657094,0,0,0.192687675289379,1.41696576325585,0,0.205116364240755,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,3.49080552272302,0,0,0,0,0,0.437062287854782,0,0.203977659483963,0.534434810531121,0,0.752122617877125,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p9@MIR3187 | |short_description=p9@MIR3187 | ||
}} | }} |
Latest revision as of 23:24, 24 September 2015
Short description: | p9@MIR3187 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MIR3187_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000520876_5end |
EntrezGene: | LPPR3 |
HGNC: | 38319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.82e-17 | 8 |
embryonic stem cell | 3.30e-15 | 5 |
neuron | 1.95e-13 | 6 |
neuroblast | 1.95e-13 | 6 |
electrically signaling cell | 1.95e-13 | 6 |
lung fibroblast | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.36e-07 | 5 |
central nervous system | 7.89e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.67e-16 | 31 |
leukemia | 9.56e-13 | 39 |
syndrome | 5.79e-10 | 1 |
hematologic cancer | 1.68e-09 | 51 |
immune system cancer | 1.68e-09 | 51 |