FFCP PHASE1:Hg19::chr19:7990991..7991059,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:7990991..7991059,- to FFCP PHASE1:Hg19::chr19:7990991..7991059,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=404217 | |EntrezGene=404217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31108 | |HGNC=31108 | ||
|TSSclassifier=strong | |||
|UniProt=P60606 | |UniProt=P60606 | ||
|association_with_transcript=0bp_to_ENST00000318978,NM_206833,uc002miy.3_5end | |||
|cluster_id=chr19:7990991..7991059,- | |||
|coexpression_cluster_id=C2506 | |||
|description=CAGE_peak_1_at_CTXN1_5end | |||
|id=chr19:7990991..7991059,- | |||
|ontology_enrichment_celltype=CL:0002321!1.63e-18!248;CL:0000220!3.62e-18!246;CL:0000066!7.23e-17!254;CL:0000222!2.16e-13!119;CL:0000213!1.21e-12!57;CL:0000215!1.21e-12!57;CL:0000133!6.34e-10!59;CL:0002078!1.52e-09!44;CL:0000076!7.07e-09!62;CL:0000221!1.09e-08!71;CL:0002139!7.88e-08!24;CL:0002319!8.42e-08!25;CL:0000115!2.00e-07!35;CL:0000071!2.17e-07!18;CL:0002546!2.17e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.84e-08;24!CL:0002319;7.81e-08;25!CL:0000213;8.78e-08;58!CL:0000215;8.78e-08;58!CL:0000071;1.94e-07;18!CL:0002078;4.10e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.10e-18,250;CL:0000066,3.82e-17,253;CL:0000222,1.71e-13,121;CL:0000213,4.35e-13,58;CL:0000215,4.35e-13,58;CL:0000133,5.36e-10,59;CL:0002078,5.83e-10,45;CL:0000076,1.66e-08,63;CL:0000221,1.73e-08,72;CL:0002139,7.35e-08,24;CL:0002319,7.86e-08,25;CL:0000115,8.03e-08,36;CL:0000071,2.03e-07,18;CL:0002546,2.03e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.94e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.41e-24!94;UBERON:0001016!2.41e-24!94;UBERON:0005743!7.00e-24!86;UBERON:0000119!9.07e-24!312;UBERON:0000483!2.35e-23!309;UBERON:0001017!2.82e-23!82;UBERON:0000025!4.77e-22!194;UBERON:0002346!8.13e-22!90;UBERON:0003056!2.66e-21!61;UBERON:0003075!8.12e-21!86;UBERON:0007284!8.12e-21!86;UBERON:0000477!1.48e-20!286;UBERON:0004111!7.07e-20!241;UBERON:0000955!1.21e-19!69;UBERON:0006238!1.21e-19!69;UBERON:0001893!3.38e-19!34;UBERON:0002780!4.77e-19!41;UBERON:0001890!4.77e-19!41;UBERON:0006240!4.77e-19!41;UBERON:0001869!5.92e-19!32;UBERON:0002791!1.54e-18!33;UBERON:0002020!1.64e-18!34;UBERON:0003528!1.64e-18!34;UBERON:0003080!3.12e-18!42;UBERON:0001049!1.11e-17!57;UBERON:0005068!1.11e-17!57;UBERON:0006241!1.11e-17!57;UBERON:0007135!1.11e-17!57;UBERON:0000924!4.49e-17!173;UBERON:0006601!4.49e-17!173;UBERON:0002616!1.75e-16!59;UBERON:0004121!3.70e-16!169;UBERON:0000475!6.71e-16!365;UBERON:0000033!4.10e-15!123;UBERON:0000481!4.91e-15!347;UBERON:0000956!1.64e-14!25;UBERON:0000203!1.64e-14!25;UBERON:0002619!3.56e-13!22;UBERON:0000153!5.30e-13!129;UBERON:0007811!5.30e-13!129;UBERON:0000922!4.89e-12!612;UBERON:0001950!6.14e-12!20;UBERON:0000064!6.54e-12!219;UBERON:0002050!5.68e-11!605;UBERON:0005423!5.68e-11!605;UBERON:0000468!8.05e-11!659;UBERON:0000923!1.06e-10!604;UBERON:0005291!1.06e-10!604;UBERON:0006598!1.06e-10!604;UBERON:0002532!1.06e-10!604;UBERON:0002049!3.78e-10!79;UBERON:0007798!3.78e-10!79;UBERON:0001981!5.35e-09!60;UBERON:0007500!5.35e-09!60;UBERON:0004537!5.35e-09!60;UBERON:0006965!5.35e-09!60;UBERON:0001637!5.90e-09!42;UBERON:0003509!5.90e-09!42;UBERON:0004572!5.90e-09!42;UBERON:0000055!9.04e-09!69;UBERON:0006914!2.75e-08!25;UBERON:0003064!4.96e-08!37;UBERON:0003914!5.19e-08!118;UBERON:0000467!5.28e-08!625;UBERON:0000487!7.24e-08!22;UBERON:0000480!7.62e-08!626;UBERON:0001986!2.17e-07!18;UBERON:0004638!2.17e-07!18;UBERON:0004852!2.17e-07!18;UBERON:0006554!4.88e-07!44;UBERON:0001008!8.03e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.80e-17;32!UBERON:0001893;5.30e-17;34!UBERON:0002791;1.09e-16;32!UBERON:0003528;2.08e-16;34!UBERON:0002020;2.08e-16;34!UBERON:0000956;1.49e-14;25!UBERON:0000203;1.49e-14;25!UBERON:0002780;3.01e-14;41!UBERON:0001890;3.01e-14;41!UBERON:0002619;3.28e-13;22!UBERON:0001950;5.72e-12;20!UBERON:0000073;1.95e-11;53!UBERON:0002616;1.95e-11;53!UBERON:0000955;5.14e-10;68!UBERON:0001017;2.26e-09;75!UBERON:0006914;2.36e-08;25!UBERON:0001016;2.51e-08;83!UBERON:0000487;6.42e-08;22!UBERON:0003914;9.76e-08;74!UBERON:0004638;1.94e-07;18!UBERON:0001986;1.94e-07;18!UBERON:0004852;1.94e-07;18!UBERON:0001637;9.04e-07;42!UBERON:0003509;9.04e-07;42!UBERON:0004572;9.04e-07;42 | |||
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| ||
|short_description=p1@CTXN1 | |||
}} | }} |
Latest revision as of 22:58, 24 September 2015
Short description: | p1@CTXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTXN1_5end |
Coexpression cluster: | C2506_putamen_caudate_nucleus_temporal_amygdala_insula_frontal |
Association with transcript: | 0bp_to_ENST00000318978, NM_206833, uc002miy.3_5end |
EntrezGene: | CTXN1 |
HGNC: | 31108 |
UniProt: | P60606 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.10e-18 | 250 |
epithelial cell | 3.82e-17 | 253 |
mesodermal cell | 1.71e-13 | 121 |
lining cell | 4.35e-13 | 58 |
barrier cell | 4.35e-13 | 58 |
neurectodermal cell | 5.36e-10 | 59 |
meso-epithelial cell | 5.83e-10 | 45 |
squamous epithelial cell | 1.66e-08 | 63 |
ectodermal cell | 1.73e-08 | 72 |
endothelial cell of vascular tree | 7.35e-08 | 24 |
neural cell | 7.86e-08 | 25 |
endothelial cell | 8.03e-08 | 36 |
blood vessel endothelial cell | 2.03e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.03e-07 | 18 |