FFCP PHASE1:Hg19::chr17:42467001..42467024,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:42467001..42467024,-
|short_description=p2@ITGA2B
|description=CAGE_peak_2_at_ITGA2B_5end
|association_with_transcript=-128bp_to_ENST00000262407,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3674 | |EntrezGene=3674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6138 | |HGNC=6138 | ||
|TSSclassifier=strong | |||
|UniProt=P08514 | |UniProt=P08514 | ||
|association_with_transcript=-128bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | |||
|cluster_id=chr17:42467001..42467024,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_2_at_ITGA2B_5end | |||
|id=chr17:42467001..42467024,- | |||
|ontology_enrichment_celltype=CL:0000763!4.66e-22!112;CL:0000049!4.66e-22!112;CL:0000037!8.24e-19!172;CL:0000566!8.24e-19!172;CL:0000988!3.19e-17!182;CL:0002032!1.62e-16!165;CL:0000837!1.62e-16!165;CL:0002274!3.38e-16!5;CL:0000457!3.38e-16!5;CL:0002191!3.38e-16!5;CL:0000097!3.38e-16!5;CL:0000831!3.38e-16!5;CL:0002028!3.38e-16!5;CL:0000163!8.16e-09!9;CL:0000764!2.63e-07!2;CL:0000765!2.63e-07!2;CL:0000050!2.63e-07!2;CL:0000038!2.63e-07!2;CL:0000558!2.63e-07!2;CL:0000547!2.63e-07!2;CL:0000549!2.63e-07!2;CL:0000550!2.63e-07!2;CL:0000552!2.63e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.27e-26;5!CL:0000163;1.03e-14;9!CL:0000763;1.73e-12;100!CL:0000764;2.35e-11;2!CL:0000558;2.35e-11;2!CL:0000840;1.73e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.33e-38,108;CL:0000049,4.33e-38,108;CL:0000097,1.24e-26,5;CL:0002028,1.24e-26,5;CL:0002032,1.36e-25,161;CL:0000837,1.36e-25,161;CL:0000037,2.85e-24,168;CL:0000988,1.01e-22,177;CL:0000163,1.02e-14,9;CL:0000764,2.11e-11,2;CL:0000765,2.11e-11,2;CL:0000050,2.11e-11,2;CL:0000038,2.11e-11,2;CL:0000558,2.11e-11,2;CL:0000547,2.11e-11,2;CL:0000549,2.11e-11,2;CL:0000550,2.11e-11,2;CL:0000552,2.11e-11,2;CL:0000840,1.50e-08,5;CL:0001029,1.50e-08,5;CL:0000134,3.33e-08,354;CL:0002320,6.38e-08,361;CL:0000034,2.38e-07,441;CL:0000219,6.30e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;2.09e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!1.98e-40!31;DOID:1240!1.78e-37!39;DOID:2531!3.33e-32!51;DOID:0060083!3.33e-32!51;DOID:1036!1.80e-18!8;DOID:0050686!1.54e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.09e-56;31!DOID:1240;1.58e-38;39!DOID:2531;3.88e-25;51!DOID:0060083;3.88e-25;51!DOID:1036;2.69e-23;8!DOID:9119;6.08e-07;1!DOID:8552;6.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.54e-58,31;DOID:1240,5.33e-51,39;DOID:2531,6.06e-38,51;DOID:0060083,6.06e-38,51;DOID:1036,2.54e-23,8;DOID:0050686,1.34e-12,137;DOID:9119,6.08e-07,1;DOID:8552,6.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.50e-14!15;UBERON:0000179!2.50e-14!15;UBERON:0000463!2.50e-14!15;UBERON:0002390!1.68e-08!102;UBERON:0003061!1.68e-08!102;UBERON:0002193!2.63e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.55e-07,371 | |||
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| ||
|short_description=p2@ITGA2B | |||
}} | }} |
Latest revision as of 21:33, 24 September 2015
Short description: | p2@ITGA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGA2B_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -128bp_to_ENST00000262407, ENST00000353281, NM_000419, uc002igt.1_5end |
EntrezGene: | ITGA2B |
HGNC: | 6138 |
UniProt: | P08514 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.33e-38 | 108 |
common myeloid progenitor | 4.33e-38 | 108 |
mast cell | 1.24e-26 | 5 |
basophil mast progenitor cell | 1.24e-26 | 5 |
hematopoietic oligopotent progenitor cell | 1.36e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-25 | 161 |
hematopoietic stem cell | 2.85e-24 | 168 |
hematopoietic cell | 1.01e-22 | 177 |
endocrine cell | 1.02e-14 | 9 |
erythroid lineage cell | 2.11e-11 | 2 |
erythroblast | 2.11e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 2.11e-11 | 2 |
erythroid progenitor cell | 2.11e-11 | 2 |
reticulocyte | 2.11e-11 | 2 |
proerythroblast | 2.11e-11 | 2 |
basophilic erythroblast | 2.11e-11 | 2 |
polychromatophilic erythroblast | 2.11e-11 | 2 |
orthochromatic erythroblast | 2.11e-11 | 2 |
immature conventional dendritic cell | 1.50e-08 | 5 |
common dendritic progenitor | 1.50e-08 | 5 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 6.38e-08 | 361 |
stem cell | 2.38e-07 | 441 |
motile cell | 6.30e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.55e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.54e-58 | 31 |
leukemia | 5.33e-51 | 39 |
hematologic cancer | 6.06e-38 | 51 |
immune system cancer | 6.06e-38 | 51 |
chronic leukemia | 2.54e-23 | 8 |
organ system cancer | 1.34e-12 | 137 |
acute myeloid leukemia | 6.08e-07 | 1 |
chronic myeloid leukemia | 6.43e-07 | 1 |