FFCP PHASE1:Hg19::chr9:124262213..124262234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2681 | |EntrezGene=2681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4253 | |HGNC=4253 | ||
|TSSclassifier=strong | |||
|UniProt=Q4G0N0 | |UniProt=Q4G0N0 | ||
|association_with_transcript=71bp_to_ENST00000481799,NR_003191,NR_045211,uc004blj.1,uc004blk.1,uc004bll.1,uc004blm.1_5end | |association_with_transcript=71bp_to_ENST00000481799,NR_003191,NR_045211,uc004blj.1,uc004blk.1,uc004bll.1,uc004blm.1_5end | ||
|cluster_id=chr9:124262213..124262234,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_3_at_GGTA1P_5end | |description=CAGE_peak_3_at_GGTA1P_5end | ||
|id=chr9:124262213..124262234,- | |id=chr9:124262213..124262234,- | ||
|ontology_enrichment_celltype=CL:0000451!5.59e-12!10;CL:0000557!1.30e-11!71;CL:0002009!5.30e-11!65;CL:0000990!6.72e-11!8;CL:0000839!5.64e-10!70;CL:0002194!1.14e-09!63;CL:0000576!1.14e-09!63;CL:0000040!1.14e-09!63;CL:0000559!1.14e-09!63;CL:0000766!1.63e-09!76;CL:0000763!2.50e-09!112;CL:0000049!2.50e-09!112;CL:0000840!9.78e-08!5;CL:0001029!9.78e-08!5;CL:0000453!5.25e-07!5 | |ontology_enrichment_celltype=CL:0000451!5.59e-12!10;CL:0000557!1.30e-11!71;CL:0002009!5.30e-11!65;CL:0000990!6.72e-11!8;CL:0000839!5.64e-10!70;CL:0002194!1.14e-09!63;CL:0000576!1.14e-09!63;CL:0000040!1.14e-09!63;CL:0000559!1.14e-09!63;CL:0000766!1.63e-09!76;CL:0000763!2.50e-09!112;CL:0000049!2.50e-09!112;CL:0000840!9.78e-08!5;CL:0001029!9.78e-08!5;CL:0000453!5.25e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000990;8.22e-15;8!CL:0000451;2.02e-14;10!CL:0000235;4.57e-11;6!CL:0000453;4.58e-11;5!CL:0000840;2.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,8.79e-15,8;CL:0000451,2.81e-14,10;CL:0000235,1.91e-11,6;CL:0000453,4.88e-11,5;CL:0000840,2.26e-09,5;CL:0001029,2.26e-09,5;CL:0000557,2.59e-08,67;CL:0000763,2.15e-07,108;CL:0000049,2.15e-07,108;CL:0002009,5.58e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.07e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.89e-55!115;UBERON:0001049!1.28e-21!57;UBERON:0005068!1.28e-21!57;UBERON:0006241!1.28e-21!57;UBERON:0007135!1.28e-21!57;UBERON:0003080!4.49e-20!42;UBERON:0002780!3.07e-19!41;UBERON:0001890!3.07e-19!41;UBERON:0006240!3.07e-19!41;UBERON:0001893!5.92e-19!34;UBERON:0002791!3.15e-18!33;UBERON:0002020!4.00e-18!34;UBERON:0003528!4.00e-18!34;UBERON:0002616!4.64e-18!59;UBERON:0001869!1.48e-17!32;UBERON:0003075!4.20e-15!86;UBERON:0007284!4.20e-15!86;UBERON:0000955!4.84e-15!69;UBERON:0006238!4.84e-15!69;UBERON:0002619!5.28e-15!22;UBERON:0001017!1.42e-14!82;UBERON:0005743!5.62e-14!86;UBERON:0002346!1.01e-13!90;UBERON:0001950!1.65e-13!20;UBERON:0002390!4.97e-13!102;UBERON:0003061!4.97e-13!102;UBERON:0002193!1.72e-12!112;UBERON:0000956!2.06e-12!25;UBERON:0000203!2.06e-12!25;UBERON:0003056!1.12e-11!61;UBERON:0000073!3.04e-11!94;UBERON:0001016!3.04e-11!94;UBERON:0000062!1.35e-10!511;UBERON:0002371!1.30e-09!80;UBERON:0000153!1.90e-09!129;UBERON:0007811!1.90e-09!129;UBERON:0001474!1.32e-08!86;UBERON:0002405!1.35e-08!115;UBERON:0000467!1.67e-08!625;UBERON:0000480!2.07e-08!626;UBERON:0000033!2.81e-08!123;UBERON:0002420!5.62e-08!9;UBERON:0007245!5.62e-08!9;UBERON:0010009!5.62e-08!9;UBERON:0010011!5.62e-08!9;UBERON:0000454!5.62e-08!9;UBERON:0000922!1.66e-07!612;UBERON:0002308!2.37e-07!9;UBERON:0000125!2.37e-07!9;UBERON:0002050!2.42e-07!605;UBERON:0005423!2.42e-07!605;UBERON:0000468!2.82e-07!659;UBERON:0000923!5.28e-07!604;UBERON:0005291!5.28e-07!604;UBERON:0006598!5.28e-07!604;UBERON:0002532!5.28e-07!604;UBERON:0009663!9.27e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.65e-12;34!UBERON:0001869;1.66e-11;32!UBERON:0007023;2.21e-10;114!UBERON:0002791;2.68e-10;32!UBERON:0002780;1.56e-09;41!UBERON:0001890;1.56e-09;41!UBERON:0003528;1.66e-09;34!UBERON:0002020;1.66e-09;34!UBERON:0002619;4.33e-08;22!UBERON:0001950;1.81e-07;20!UBERON:0000369;2.86e-07;4!UBERON:0002435;2.86e-07;4!UBERON:0000204;2.86e-07;4!UBERON:0000956;7.45e-07;25!UBERON:0000203;7.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-34,114;UBERON:0001893,1.24e-12,34;UBERON:0002780,1.80e-12,41;UBERON:0001890,1.80e-12,41;UBERON:0003080,1.80e-12,41;UBERON:0006240,1.80e-12,41;UBERON:0001869,4.57e-12,32;UBERON:0002791,1.22e-10,32;UBERON:0000073,1.48e-10,53;UBERON:0002616,1.48e-10,53;UBERON:0003528,8.65e-10,34;UBERON:0002020,8.65e-10,34;UBERON:0001049,1.08e-09,56;UBERON:0005068,1.08e-09,56;UBERON:0006241,1.08e-09,56;UBERON:0007135,1.08e-09,56;UBERON:0000955,1.64e-08,68;UBERON:0006238,1.64e-08,68;UBERON:0002619,5.88e-08,22;UBERON:0002405,6.31e-08,93;UBERON:0001017,7.55e-08,81;UBERON:0001950,2.45e-07,20;UBERON:0000369,5.88e-07,4;UBERON:0002435,5.88e-07,4;UBERON:0000204,5.88e-07,4;UBERON:0010082,5.88e-07,4;UBERON:0003056,9.01e-07,61;UBERON:0000956,9.66e-07,25;UBERON:0000203,9.66e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0.880801318004542,0.553995408531877,0.601633342410425,0.217010870715852,2.23915474239924,0.971680998056939,2.31818010870768,0,0,0.242584061187816,0.232429036905685,0,0,0,1.0246428261164,0.709446689665756,0,0,0,0.564727018627814,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.797854630486527,0.426224750532694,0.580418477257168,0,0,0,1.0429658368404,0,0.605399502633369,0,1.26584954976354,2.74631872205524,2.33864729961548,0.838634582033504,1.01095768031846,2.25265339262259,0.32145117339416,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,98.337860277369,115.099756354816,55.3105115758479,0.953962497221368,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,1.20848795132744,1.52054421143703,2.19655851793353,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.72351904261178,2.57404691653161,1.78357394746474,0,0,0,0,0,0,0,0,2.07328115540772,1.58531948758658,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,5.02257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0.941438007767792,0,0,0,0.229723400206959,0,0,1.13929437434833,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0,0,0,9.41403626796211,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,3.51592382018778,0,1.4098700508785,0,1.46508179271894,0,0,0,0,0.296964680832639,0,0.994147647766298,0.984685914873589,0.111308705022906,0,0,6.17668763578316,1.38141957765574,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,1.93866549219044,1.20598527610407,0,0,0,2.17499872630438,0,0,0,0,2.04123229368278,0,3.54296554325536,1.20596438625408,0,0.221158519862449,0,1.75508317723178,0,0,1.15425387755696,0,0,0,0,0,0,1.5991043280559,0,2.35470384592537,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.884575645033392,1.22206028986725,0.296521128680622,0.247127877893006,0.104421949505455,1.7524294574976,3.21031058919516,2.81117334870407,0,0.19566461893209,0,1.57833761139756,2.41981432097328,1.22429104652196,4.7389934721366,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0,1.04135843001079,0,0,2.79562669187248,0,0,0,0,4.26751672549045,0.176512253383001,1.12990370390266,0,0,1.51945910294109,0,0,1.49417096317547,0,0,0,0,0,0,0.235694034616795,0,0,0,0,4.20294202096853,0.821432273351958,0,0,0,1.95497680890578,3.20824593616357,0,0.599037001496973,1.28767814440971,1.11585728720936,0.671834724867263,0,0,0,0,0,0,0,2.38568906942791,0.953423842781029,0,0,0,22.047441372047,23.9878605912964,1.15424157650247,0,0.472834243795189,0.209818352539992,0,0,0.191915197319445,3.57347663186684,3.97255182219259,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.517131825446202,0.13223260174269,0,0,0.427149650270779,0.314408610199332,1.65695622138878,6.94632430536731,0,0,0.638341257770182,0,1.0027595760908,0.306345576763462,0.655745261419609,0,0.886068179966986,1.34228891392159,0.625954653532499,1.72022758707021,0.554645257684261,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,6.8201108093786,3.32162100783408,6.54261577023377,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,0.798169295285756,1.43581454968528,0.252071696221718,0.899044282034833,3.22951291263702,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.601682626794058,0,0.781514011233092,0,0,0,1.2832141077495,2.34323429584154,0.620060389503552,1.26831620387814,1.09394961803644,2.74128883428591,0.496211178389294,0,0,0,0,0,0.455324382702595,5.58824932024625,0,0,1.01954599465248,1.51277379194553,0,0,1.49136876415977,1.09980912941201,0,1.82631744101899,0,0,0.857718530119876,0,0,0,0,0,0,0,11.1859113293272,0,0,2.54032230114557,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,2.91426595835484,0,0,0,0,0,0,1.54348316215889,1.31135736302374,0,0.980593287015622,0,0.588925401344836,0.594092800654172,0.8453114551668,0,5.63903507879122,3.41626806259959,0,0,0.352894871715692,0,0,7.33966853447265,0.86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| ||
|short_description=p3@GGTA1P | |short_description=p3@GGTA1P | ||
}} | }} |
Latest revision as of 21:24, 24 September 2015
Short description: | p3@GGTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GGTA1P_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 71bp_to_ENST00000481799, NR_003191, NR_045211, uc004blj.1, uc004blk.1, uc004bll.1, uc004blm.1_5end |
EntrezGene: | GGTA1P |
HGNC: | 4253 |
UniProt: | Q4G0N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 8.79e-15 | 8 |
dendritic cell | 2.81e-14 | 10 |
macrophage | 1.91e-11 | 6 |
Langerhans cell | 4.88e-11 | 5 |
immature conventional dendritic cell | 2.26e-09 | 5 |
common dendritic progenitor | 2.26e-09 | 5 |
granulocyte monocyte progenitor cell | 2.59e-08 | 67 |
myeloid cell | 2.15e-07 | 108 |
common myeloid progenitor | 2.15e-07 | 108 |
macrophage dendritic cell progenitor | 5.58e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-34 | 114 |
telencephalon | 1.24e-12 | 34 |
regional part of forebrain | 1.80e-12 | 41 |
forebrain | 1.80e-12 | 41 |
anterior neural tube | 1.80e-12 | 41 |
future forebrain | 1.80e-12 | 41 |
cerebral hemisphere | 4.57e-12 | 32 |
regional part of telencephalon | 1.22e-10 | 32 |
regional part of nervous system | 1.48e-10 | 53 |
regional part of brain | 1.48e-10 | 53 |
brain grey matter | 8.65e-10 | 34 |
gray matter | 8.65e-10 | 34 |
neural tube | 1.08e-09 | 56 |
neural rod | 1.08e-09 | 56 |
future spinal cord | 1.08e-09 | 56 |
neural keel | 1.08e-09 | 56 |
brain | 1.64e-08 | 68 |
future brain | 1.64e-08 | 68 |
regional part of cerebral cortex | 5.88e-08 | 22 |
immune system | 6.31e-08 | 93 |
central nervous system | 7.55e-08 | 81 |
neocortex | 2.45e-07 | 20 |
corpus striatum | 5.88e-07 | 4 |
striatum | 5.88e-07 | 4 |
ventral part of telencephalon | 5.88e-07 | 4 |
future corpus striatum | 5.88e-07 | 4 |
pre-chordal neural plate | 9.01e-07 | 61 |
cerebral cortex | 9.66e-07 | 25 |
pallium | 9.66e-07 | 25 |