FFCP PHASE1:Hg19::chr6:134496687..134496711,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:134496687..134496711,-
|short_description=p22@SGK1
|description=CAGE_peak_22_at_SGK1_5end
|association_with_transcript=122bp_to_FM205707_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6446 | |EntrezGene=6446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |HGNC=10810 | ||
|TSSclassifier=strong | |||
|UniProt=O00141 | |UniProt=O00141 | ||
|association_with_transcript=122bp_to_FM205707_5end | |||
|cluster_id=chr6:134496687..134496711,- | |||
|description=CAGE_peak_22_at_SGK1_5end | |||
|id=chr6:134496687..134496711,- | |||
|ontology_enrichment_celltype=CL:0002139!1.85e-14!24;CL:0000071!2.11e-12!18;CL:0002546!2.11e-12!18;CL:1000413!1.27e-09!9;CL:0000115!1.27e-08!35;CL:0002371!2.67e-07!591;CL:0000359!5.64e-07!32;CL:0000012!8.96e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.64e-15;18!CL:1000413;9.43e-15;9!CL:0000094;2.12e-11;8!CL:0002139;4.77e-11;24!CL:0000569;3.15e-09;4!CL:0002545;1.60e-08;2!CL:0000771;1.60e-08;2!CL:0000081;3.36e-08;11!CL:0002549;4.64e-08;2!CL:0002494;1.04e-07;16!CL:0000359;3.25e-07;32!CL:0002595;3.46e-07;5!CL:0000115;7.80e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.44e-15,18;CL:0002546,2.44e-15,18;CL:1000413,1.53e-14,9;CL:0000094,1.92e-11,8;CL:0002139,4.49e-11,24;CL:0000569,2.31e-09,4;CL:0000011,2.31e-09,4;CL:0000771,1.34e-08,2;CL:0000115,2.17e-08,36;CL:0002545,2.71e-08,2;CL:0000081,3.13e-08,11;CL:0000222,3.69e-08,121;CL:0002549,4.67e-08,2;CL:0002494,1.10e-07,16;CL:0000359,1.75e-07,32;CL:0002595,3.33e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.64e-15;18!CL:0000011;3.15e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.66e-18!79;UBERON:0007798!3.66e-18!79;UBERON:0001637!1.17e-17!42;UBERON:0003509!1.17e-17!42;UBERON:0004572!1.17e-17!42;UBERON:0004535!1.40e-17!110;UBERON:0000055!1.58e-17!69;UBERON:0001981!7.80e-17!60;UBERON:0007500!7.80e-17!60;UBERON:0004537!7.80e-17!60;UBERON:0006965!7.80e-17!60;UBERON:0004872!1.16e-16!84;UBERON:0001009!1.55e-16!113;UBERON:0004573!6.36e-14!33;UBERON:0004571!6.36e-14!33;UBERON:0001986!2.11e-12!18;UBERON:0004638!2.11e-12!18;UBERON:0004852!2.11e-12!18;UBERON:0003081!4.04e-12!216;UBERON:0003914!6.79e-12!118;UBERON:0000947!6.70e-11!21;UBERON:0010191!6.70e-11!21;UBERON:0000487!1.29e-10!22;UBERON:0006914!1.38e-10!25;UBERON:0003915!1.27e-09!9;UBERON:0004700!1.27e-09!9;UBERON:0001917!1.27e-09!9;UBERON:0000926!7.04e-07!448;UBERON:0004120!7.04e-07!448;UBERON:0006603!7.04e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.13e-18;42!UBERON:0003509;1.13e-18;42!UBERON:0004572;1.13e-18;42!UBERON:0004638;2.64e-15;18!UBERON:0001986;2.64e-15;18!UBERON:0004852;2.64e-15;18!UBERON:0000487;5.10e-15;22!UBERON:0003915;9.43e-15;9!UBERON:0004700;9.43e-15;9!UBERON:0001917;9.43e-15;9!UBERON:0004573;5.50e-14;33!UBERON:0004571;5.50e-14;33!UBERON:0007500;8.38e-14;56!UBERON:0001981;8.38e-14;56!UBERON:0004537;8.38e-14;56!UBERON:0006914;5.69e-13;25!UBERON:0000490;2.74e-09;33!UBERON:0000055;9.51e-09;65!UBERON:0005800;1.60e-08;2!UBERON:0001515;1.60e-08;2!UBERON:0002049;4.39e-08;75!UBERON:0007798;4.39e-08;75!UBERON:0005629;4.64e-08;2!UBERON:0005358;4.64e-08;2!UBERON:0001886;4.64e-08;2!UBERON:0004086;4.64e-08;2!UBERON:0005282;4.64e-08;2!UBERON:0005281;4.64e-08;2!UBERON:0000947;6.87e-08;21!UBERON:0010191;6.87e-08;21!UBERON:0003834;3.46e-07;5!UBERON:0001533;3.46e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.72e-21,83;UBERON:0001637,3.81e-21,42;UBERON:0003509,3.81e-21,42;UBERON:0004572,3.81e-21,42;UBERON:0007500,5.51e-20,59;UBERON:0001981,5.51e-20,59;UBERON:0004537,5.51e-20,59;UBERON:0006965,5.51e-20,59;UBERON:0002049,3.13e-17,78;UBERON:0007798,3.13e-17,78;UBERON:0000055,1.12e-16,68;UBERON:0004535,2.91e-16,109;UBERON:0003914,4.40e-16,117;UBERON:0004573,9.85e-16,33;UBERON:0004571,9.85e-16,33;UBERON:0001009,1.18e-15,112;UBERON:0004638,2.44e-15,18;UBERON:0001986,2.44e-15,18;UBERON:0004852,2.44e-15,18;UBERON:0000487,3.87e-15,22;UBERON:0003915,1.53e-14,9;UBERON:0004700,1.53e-14,9;UBERON:0001917,1.53e-14,9;UBERON:0006914,4.48e-13,25;UBERON:0003081,1.41e-10,203;UBERON:0005800,2.71e-08,2;UBERON:0001515,2.71e-08,2;UBERON:0000025,4.57e-08,192;UBERON:0005629,4.67e-08,2;UBERON:0005358,4.67e-08,2;UBERON:0001886,4.67e-08,2;UBERON:0004086,4.67e-08,2;UBERON:0005282,4.67e-08,2;UBERON:0005281,4.67e-08,2;UBERON:0000947,1.07e-07,21;UBERON:0010191,1.07e-07,21;UBERON:0003834,3.33e-07,5;UBERON:0001533,3.33e-07,5;UBERON:0003498,8.23e-07,5;UBERON:0005985,8.23e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0.393364276848904,0,1.23852898652861,0,0,0,0,0,0,1.66198622559563,1.40381113229099,0.651032612147555,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0.619412741790207,0,0.256160706529101,0.47296445977717,1.03423704220986,0,0,0,0,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0.43917392846563,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,1.13061588384802,4.61449379830897,2.47606237746061,2.71693456497854,0.258416759169329,0.71153252537342,0,1.61131726843659,2.28081631715554,0,1.10298924103761,3.24056779152704,0.357198913136319,0,0.225222960966644,1.53316637465883,0.949265659568129,0.549605231791222,1.31780417436063,3.87780264148325,0,1.49091585508596,0.379891534993739,3.70745706277013,2.0078563452417,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0,1.36221684880438,1.15235184896,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.340296549480063,1.25572744982203,0,0,0.300091096084402,0,0.515281080091258,0,1.0126579934476,0.0974370051611986,0.252433774244115,0,0,1.42003837006646,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0.462985512576611,0.761016608938393,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0.285826432630578,1.23344192779897,0,0.66004457238855,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,1.32845119707087,0.921845842708516,0.0868836144680828,0.195801157462741,0.343143423810856,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0.61384789315225,0,0.128139149255701,0.511707249066704,0,4.45254199334973,0,0.177561725313127,0.164254312027618,0,0.464841513839837,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,1.65896526242959,0,0,5.03699754929024,0.6970372701606,0.616067160352178,1.06461206063404,0,0.74129687641568,1.14499909393593,0.744316738719335,0,0,0,0,0,0,0,0,0,1.2130948894399,0,1.26377536871694,0,0.243713489631284,1.05650146756755,0,0,1.13008116620243,0,1.99031692572366,3.5076070820301,0,0,0.405820753925408,0,0,0,0,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.21787692703798,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,1.45668227720456,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.745515213392595,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0.0788057072991982,0,3.37921076862101,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0.439656701034247,0,0.258565912723101,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0.303298235083296,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0,8.14432922682883,0.50313580350515,0,0.686520205190771,2.57092570397506,5.12942761923176,1.47855149989634,1.91156120596443,0,0.155262956876259,2.07353103920428,0.265841714557995,0.521745061811734,0.300515217994437,0,0.406870733204662,0.545545977607678,0.644463342254931,0.928067519756987,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p22@SGK1 | |||
}} | }} |
Latest revision as of 21:19, 24 September 2015
Short description: | p22@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SGK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_FM205707_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | O00141 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.44e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-15 | 18 |
endothelial cell of artery | 1.53e-14 | 9 |
granulocyte | 1.92e-11 | 8 |
endothelial cell of vascular tree | 4.49e-11 | 24 |
cardiac mesenchymal cell | 2.31e-09 | 4 |
migratory trunk neural crest cell | 2.31e-09 | 4 |
eosinophil | 1.34e-08 | 2 |
endothelial cell | 2.17e-08 | 36 |
thoracic aorta endothelial cell | 2.71e-08 | 2 |
blood cell | 3.13e-08 | 11 |
mesodermal cell | 3.69e-08 | 121 |
fibroblast of choroid plexus | 4.67e-08 | 2 |
cardiocyte | 1.10e-07 | 16 |
vascular associated smooth muscle cell | 1.75e-07 | 32 |
smooth muscle cell of the subclavian artery | 3.33e-07 | 5 |