FFCP PHASE1:Hg19::chr1:209979411..209979433,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:209979411..209979433,-
|short_description=p2@IRF6
|description=CAGE_peak_2_at_IRF6_5end
|association_with_transcript=-22bp_to_ENST00000367021_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3664 | |EntrezGene=3664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6121 | |HGNC=6121 | ||
|TSSclassifier=strong | |||
|UniProt=O14896 | |UniProt=O14896 | ||
|association_with_transcript=-22bp_to_ENST00000367021_5end | |||
|cluster_id=chr1:209979411..209979433,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_2_at_IRF6_5end | |||
|id=chr1:209979411..209979433,- | |||
|ontology_enrichment_celltype=CL:0002076!3.28e-23!43;CL:0000066!5.36e-22!254;CL:0000223!2.07e-15!59;CL:0002251!7.09e-12!21;CL:0002368!2.31e-11!13;CL:0002159!9.36e-10!13;CL:0002202!1.42e-07!9;CL:0002632!1.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.45e-23;42!CL:0002251;6.90e-17;20!CL:0002368;1.09e-14;13!CL:0002159;3.66e-10;14!CL:0002202;1.10e-09;9!CL:0002632;1.10e-09;9!CL:0000622;1.32e-07;5!CL:0000244;1.69e-07;4!CL:0000731;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.37e-31,42;CL:0000066,9.89e-24,253;CL:0000223,7.37e-22,58;CL:0002251,7.07e-17,20;CL:0002368,1.10e-14,13;CL:0002159,3.66e-10,14;CL:0002202,1.10e-09,9;CL:0002632,1.10e-09,9;CL:0000622,1.36e-07,5;CL:0000244,1.70e-07,4;CL:0000731,1.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;2.74e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!2.34e-13!14;DOID:305!1.14e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.66e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.77e-15,14;DOID:305,2.12e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.61e-20!169;UBERON:0000925!6.61e-20!169;UBERON:0006595!6.61e-20!169;UBERON:0001007!9.16e-14!155;UBERON:0001555!9.16e-14!155;UBERON:0007026!9.16e-14!155;UBERON:0001004!1.18e-12!72;UBERON:0000161!2.53e-12!35;UBERON:0004921!1.85e-11!129;UBERON:0004185!1.85e-11!129;UBERON:0000464!2.58e-11!104;UBERON:0000077!1.78e-10!130;UBERON:0000166!4.14e-10!21;UBERON:0000466!1.21e-08!126;UBERON:0001008!2.14e-08!45;UBERON:0006554!5.81e-08!44;UBERON:0005631!7.10e-08!14;UBERON:0000158!7.10e-08!14;UBERON:0005153!8.02e-08!37;UBERON:0003102!8.70e-08!95;UBERON:0000062!9.31e-08!511;UBERON:0005156!1.10e-07!59;UBERON:0000990!1.10e-07!59;UBERON:0000344!1.30e-07!12;UBERON:0000065!1.48e-07!53;UBERON:0005911!1.60e-07!82;UBERON:0000165!2.10e-07!28;UBERON:0000930!2.10e-07!28;UBERON:0003064!4.49e-07!37;UBERON:0000365!5.90e-07!5;UBERON:0004175!7.38e-07!25;UBERON:0005178!8.35e-07!34;UBERON:0002224!8.35e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.29e-12;33!UBERON:0000161;3.48e-10;19!UBERON:0000166;3.48e-10;19!UBERON:0001555;5.96e-10;54!UBERON:0000165;2.27e-09;28!UBERON:0000344;2.41e-09;20!UBERON:0000365;1.11e-08;5!UBERON:0000974;2.00e-08;6!UBERON:0007196;7.59e-08;15!UBERON:0001558;7.59e-08;15!UBERON:0000486;7.87e-08;12!UBERON:0001041;8.64e-08;14!UBERON:0005911;2.95e-07;36!UBERON:0005409;3.23e-07;22!UBERON:0005910;4.41e-07;6!UBERON:0005631;8.47e-07;10!UBERON:0000158;8.47e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.21e-24,160;UBERON:0000925,5.21e-24,160;UBERON:0006595,5.21e-24,160;UBERON:0001007,3.58e-16,145;UBERON:0001555,3.58e-16,145;UBERON:0007026,3.58e-16,145;UBERON:0001004,5.74e-14,74;UBERON:0004921,8.62e-14,118;UBERON:0000161,5.22e-13,36;UBERON:0000166,2.26e-11,22;UBERON:0001008,3.16e-11,48;UBERON:0006554,1.18e-10,47;UBERON:0005631,3.35e-10,14;UBERON:0000158,3.35e-10,14;UBERON:0003102,9.33e-10,99;UBERON:0000344,2.27e-09,20;UBERON:0000065,6.62e-09,54;UBERON:0000165,6.65e-09,29;UBERON:0000930,6.65e-09,29;UBERON:0000365,1.11e-08,5;UBERON:0007196,7.26e-08,15;UBERON:0001558,7.26e-08,15;UBERON:0000974,7.38e-08,10;UBERON:0000153,1.07e-07,62;UBERON:0007811,1.07e-07,62;UBERON:0003124,1.22e-07,7;UBERON:0004175,1.96e-07,25;UBERON:0001041,2.62e-07,87;UBERON:0005178,3.14e-07,34;UBERON:0002224,3.14e-07,34;UBERON:0005910,4.39e-07,6;UBERON:0005156,4.67e-07,59;UBERON:0000990,4.67e-07,59;UBERON:0005911,5.01e-07,82;UBERON:0005153,5.06e-07,37;UBERON:0005181,6.74e-07,35;UBERON:0000922,7.20e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,6.63481628554074,9.07141518364156,4.80571018686379,5.53910654279752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,49.6487461218621,57.831536405424,56.9421175656853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,119.853149848246,87.8759129399098,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,0,150.016353937032,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0126579934476,1.36411807225678,0.252433774244115,0,0,0,0.10075209822764,0.339121184620975,107.453034358793,72.550468077162,91.4906659290922,0.609868530647977,0.397589304964456,1.04574548582567,0.621966330092223,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68965315629341,0,301.923035159129,89.9214026060956,57.9046881090994,59.7195471272516,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,74.0497288495538,68.5367083051347,71.171098815678,44.4210272606128,70.3334131203788,73.9928570788858,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,8.18444442904901,4.99306318531491,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,92.8344957504209,57.8268610517429,0,0,0,16.6943856775742,7.77854904754589,1.56869953835371,0,4.85537492907228,0,0,0.215915916102139,0,0.270946437543853,0,5.3524017339458,8.31076008928724,0.447749509444357,0,0,0,0,0,1.75169719801128,0,0,109.684717757269,72.1566873100539,0,0,0,0,0,0,0,0.255679882248303,0,107.600479899997,54.5819791316901,37.5181374734077,28.1218630778429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.4688155260931,36.1963228789325,76.2236894029258,1.50630081242847,164.022546987739,254.391928258115,181.806362950037,116.469763904928,0,0,0,0,0,0,0,0,0,0,33.5705095894013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36277837387947,0,0,0,0,11.4597352674091,2.37571744666111,10.1363031692747,0,0,0,0,4.01138275443188,3.98495976502139,1.38141957765574,0.755798243562828,0,0,0,5.84144282457625,0.179021174675609,0,2.76201535783414,0,0,0,0,0,8.33368835472746,2.62379999988587,0.724999575434793,14.793148277115,3.30529745380596,2.83665218121524,0.344743373241465,0,0,0,0,3.05163472634166,0.331737779793674,1.18219047581419,0.438770794307945,0,43.3607844706456,5.46346835376959,0,0.69169171316418,0.807818799687949,0.977826347298073,3.82801391678303,2.56473261525214,4.79731298416771,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,2.68570835724488,0,7.96209544862804,7.69580811179051,8.55442202907076,0,0,0,0.067401132980677,0,0,0,53.6121055873926,0,3.55125962564451,4.83962864194656,0,0,0,0,0,0,0,0,0.569219092059585,0,9.37222587009707,85.5473629427517,58.0684907891285,4.71762004253481,0,0,0,0,23.7623090396628,0,3.61569185248852,0,0,0,1.95551382734803,0.801588202515337,6.40358984218058,0,2.59362750877391,0,0.171594997861965,0,0,105.119539439091,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.482259445395058,1.2378549293751,3.32352270423348,13.2734596015385,74.2849876375632,0.0607495566580247,53.3341153282833,1.18208560948797,1.57363764404994,0,0,5.75745591958336,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.747511887973863,1.88645166119599,2.07119527673598,0,0,0,39.5771579817513,0,0,0,0,0.785270481251171,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,2.74705760366215,0.39997479170986,0,0,0,0,40.1454187154806,51.0103353227038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,40.3387123039215,21.2345502025933,37.6028626969442,34.0800715143498,0,0,0,0.300841313397029,0,1.56302802246618,1.30953347240711,0,2.95712172434091,0,0,0,0,0,3.83780436800028,4.46590060550365,0,31.6850820546196,0,0,0.606965604236632,0,3.28198769601764,0,0,0.0679697329768317,0,0.118193840883968,0.778619813244484,5.5730095923865,0,3.92381028639305,0.913158720509496,0,0,0,0,0,0,0,6.00926876072807,9.5602347172612,17.2814915453523,6.45341038230416,0,0,2.9637093513365,3.43660302816075,0,0,2.12525320415805,4.41676051268593,8.65617267374113,0,0,0,7.77137588894623,1.40363678077263,1.39265542612958,0,0.79062257427272,0,1.35866559210006,9.49242144727719,6.1196676941108,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,19.4623793080167,28.584484608971,0.401206833445841,8.76403665895821,0.917458566809082,0,0,0,0,4.2322147241232,0,0,0,0,0,0,2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| ||
|short_description=p2@IRF6 | |||
}} | }} |
Latest revision as of 21:08, 24 September 2015
Short description: | p2@IRF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRF6_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | -22bp_to_ENST00000367021_5end |
EntrezGene: | IRF6 |
HGNC: | 6121 |
UniProt: | O14896 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.37e-31 | 42 |
epithelial cell | 9.89e-24 | 253 |
endodermal cell | 7.37e-22 | 58 |
epithelial cell of alimentary canal | 7.07e-17 | 20 |
respiratory epithelial cell | 1.10e-14 | 13 |
general ecto-epithelial cell | 3.66e-10 | 14 |
epithelial cell of tracheobronchial tree | 1.10e-09 | 9 |
epithelial cell of lower respiratory tract | 1.10e-09 | 9 |
acinar cell | 1.36e-07 | 5 |
transitional epithelial cell | 1.70e-07 | 4 |
urothelial cell | 1.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.21e-24 | 160 |
endoderm | 5.21e-24 | 160 |
presumptive endoderm | 5.21e-24 | 160 |
digestive system | 3.58e-16 | 145 |
digestive tract | 3.58e-16 | 145 |
primitive gut | 3.58e-16 | 145 |
respiratory system | 5.74e-14 | 74 |
subdivision of digestive tract | 8.62e-14 | 118 |
orifice | 5.22e-13 | 36 |
oral opening | 2.26e-11 | 22 |
renal system | 3.16e-11 | 48 |
urinary system structure | 1.18e-10 | 47 |
extraembryonic membrane | 3.35e-10 | 14 |
membranous layer | 3.35e-10 | 14 |
surface structure | 9.33e-10 | 99 |
mucosa | 2.27e-09 | 20 |
respiratory tract | 6.62e-09 | 54 |
mouth | 6.65e-09 | 29 |
stomodeum | 6.65e-09 | 29 |
urothelium | 1.11e-08 | 5 |
tracheobronchial tree | 7.26e-08 | 15 |
lower respiratory tract | 7.26e-08 | 15 |
neck | 7.38e-08 | 10 |
anterior region of body | 1.07e-07 | 62 |
craniocervical region | 1.07e-07 | 62 |
chorion | 1.22e-07 | 7 |
internal genitalia | 1.96e-07 | 25 |
foregut | 2.62e-07 | 87 |
thoracic cavity element | 3.14e-07 | 34 |
thoracic cavity | 3.14e-07 | 34 |
transitional epithelium | 4.39e-07 | 6 |
reproductive structure | 4.67e-07 | 59 |
reproductive system | 4.67e-07 | 59 |
endo-epithelium | 5.01e-07 | 82 |
epithelial bud | 5.06e-07 | 37 |
thoracic segment organ | 6.74e-07 | 35 |
embryo | 7.20e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.77e-15 | 14 |
carcinoma | 2.12e-07 | 106 |