FFCP PHASE1:Hg19::chr1:209941942..209941964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80342 | |EntrezGene=80342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |HGNC=30766 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBA0,C9J0C0 | |UniProt=C9JBA0,C9J0C0 | ||
|association_with_transcript=0bp_to_ENST00000474496,ENST00000477431,ENST00000487271_5end | |association_with_transcript=0bp_to_ENST00000474496,ENST00000477431,ENST00000487271_5end | ||
|cluster_id=chr1:209941942..209941964,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_TRAF3IP3_5end | |description=CAGE_peak_4_at_TRAF3IP3_5end | ||
|id=chr1:209941942..209941964,+ | |id=chr1:209941942..209941964,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.12e-71!140;CL:0000037!5.07e-70!172;CL:0000566!5.07e-70!172;CL:0000988!2.01e-67!182;CL:0002032!2.87e-64!165;CL:0000837!2.87e-64!165;CL:0002087!1.74e-61!119;CL:0002031!9.23e-61!124;CL:0000542!1.59e-33!53;CL:0000051!1.59e-33!53;CL:0000838!4.90e-33!52;CL:0000766!6.52e-33!76;CL:0000763!1.67e-29!112;CL:0000049!1.67e-29!112;CL:0000839!7.88e-28!70;CL:0002057!1.09e-26!42;CL:0000557!2.20e-26!71;CL:0002194!3.34e-24!63;CL:0000576!3.34e-24!63;CL:0000040!3.34e-24!63;CL:0000559!3.34e-24!63;CL:0000860!7.55e-24!45;CL:0000084!2.25e-23!25;CL:0000827!2.25e-23!25;CL:0002009!6.86e-23!65;CL:0000791!1.35e-18!18;CL:0000789!1.35e-18!18;CL:0002420!1.35e-18!18;CL:0002419!1.35e-18!18;CL:0000790!1.35e-18!18;CL:0000134!2.54e-12!358;CL:0000625!3.43e-12!11;CL:0002320!2.28e-11!365;CL:0000945!9.98e-10!24;CL:0000826!9.98e-10!24;CL:0000236!2.22e-09!14;CL:0000219!3.56e-08!390;CL:0002393!2.09e-07!9;CL:0002397!2.09e-07!9;CL:0000094!3.34e-07!8;CL:0000624!3.41e-07!6 | |ontology_enrichment_celltype=CL:0000738!4.12e-71!140;CL:0000037!5.07e-70!172;CL:0000566!5.07e-70!172;CL:0000988!2.01e-67!182;CL:0002032!2.87e-64!165;CL:0000837!2.87e-64!165;CL:0002087!1.74e-61!119;CL:0002031!9.23e-61!124;CL:0000542!1.59e-33!53;CL:0000051!1.59e-33!53;CL:0000838!4.90e-33!52;CL:0000766!6.52e-33!76;CL:0000763!1.67e-29!112;CL:0000049!1.67e-29!112;CL:0000839!7.88e-28!70;CL:0002057!1.09e-26!42;CL:0000557!2.20e-26!71;CL:0002194!3.34e-24!63;CL:0000576!3.34e-24!63;CL:0000040!3.34e-24!63;CL:0000559!3.34e-24!63;CL:0000860!7.55e-24!45;CL:0000084!2.25e-23!25;CL:0000827!2.25e-23!25;CL:0002009!6.86e-23!65;CL:0000791!1.35e-18!18;CL:0000789!1.35e-18!18;CL:0002420!1.35e-18!18;CL:0002419!1.35e-18!18;CL:0000790!1.35e-18!18;CL:0000134!2.54e-12!358;CL:0000625!3.43e-12!11;CL:0002320!2.28e-11!365;CL:0000945!9.98e-10!24;CL:0000826!9.98e-10!24;CL:0000236!2.22e-09!14;CL:0000219!3.56e-08!390;CL:0002393!2.09e-07!9;CL:0002397!2.09e-07!9;CL:0000094!3.34e-07!8;CL:0000624!3.41e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.16e-30;25!CL:0002087;3.12e-25;104!CL:0000542;6.26e-25;53!CL:0000860;9.18e-25;33!CL:0002057;9.18e-25;33!CL:0000791;3.13e-24;18!CL:0000789;3.13e-24;18!CL:0002419;3.13e-24;18!CL:0000576;2.00e-23;48!CL:0000766;1.22e-18;69!CL:0000738;3.29e-18;136!CL:0000473;2.49e-16;39!CL:0000234;2.49e-16;39!CL:0000625;1.04e-15;11!CL:0000988;4.59e-13;177!CL:0000945;3.54e-12;24!CL:0000236;1.67e-11;13!CL:0000763;6.85e-10;100!CL:0000094;4.70e-09;8!CL:0000624;4.73e-09;6!CL:0000219;3.51e-08;193!CL:0000081;1.80e-07;11!CL:0002393;6.88e-07;6!CL:0002397;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.44e-90,136;CL:0002087,4.54e-78,115;CL:0000037,7.50e-78,168;CL:0000988,1.31e-76,177;CL:0002031,9.24e-75,120;CL:0002032,1.30e-70,161;CL:0000837,1.30e-70,161;CL:0000542,7.72e-44,53;CL:0000051,7.72e-44,53;CL:0000838,3.48e-43,52;CL:0000766,1.43e-40,72;CL:0000860,4.80e-35,42;CL:0002057,4.80e-35,42;CL:0000557,2.92e-32,67;CL:0000839,1.38e-31,66;CL:0000084,1.28e-30,25;CL:0000827,1.28e-30,25;CL:0002194,4.50e-29,59;CL:0000576,4.50e-29,59;CL:0000040,4.50e-29,59;CL:0000559,4.50e-29,59;CL:0000473,5.73e-29,48;CL:0000234,5.73e-29,48;CL:0000763,7.57e-28,108;CL:0000049,7.57e-28,108;CL:0002009,1.19e-27,61;CL:0000791,3.04e-24,18;CL:0000789,3.04e-24,18;CL:0002420,3.04e-24,18;CL:0002419,3.04e-24,18;CL:0000790,3.04e-24,18;CL:0000134,1.33e-18,354;CL:0002320,1.28e-17,361;CL:0000625,1.05e-15,11;CL:0000219,3.35e-14,386;CL:0000236,2.38e-12,14;CL:0000945,3.51e-12,24;CL:0000826,3.51e-12,24;CL:0000048,3.55e-10,427;CL:0000034,4.85e-10,441;CL:0000723,1.22e-09,433;CL:0002393,2.40e-09,9;CL:0002397,2.40e-09,9;CL:0000094,4.48e-09,8;CL:0000624,4.61e-09,6;CL:0000081,1.63e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.60e-25;42!CL:0000051;6.26e-25;53!CL:0000790;3.13e-24;18!CL:0000049;1.10e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-38!102;UBERON:0003061!3.15e-38!102;UBERON:0002193!1.31e-34!112;UBERON:0002371!4.15e-22!80;UBERON:0001474!3.61e-19!86;UBERON:0002405!2.47e-17!115;UBERON:0004765!1.59e-13!101;UBERON:0001434!1.59e-13!101;UBERON:0000178!2.36e-13!15;UBERON:0000179!2.36e-13!15;UBERON:0000463!2.36e-13!15;UBERON:0002384!4.22e-10!375;UBERON:0007023!4.88e-08!115;UBERON:0003081!6.06e-08!216;UBERON:0004177!6.71e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!3.15e-38!102;UBERON:0003061!3.15e-38!102;UBERON:0002193!1.31e-34!112;UBERON:0002371!4.15e-22!80;UBERON:0001474!3.61e-19!86;UBERON:0002405!2.47e-17!115;UBERON:0004765!1.59e-13!101;UBERON:0001434!1.59e-13!101;UBERON:0000178!2.36e-13!15;UBERON:0000179!2.36e-13!15;UBERON:0000463!2.36e-13!15;UBERON:0002384!4.22e-10!375;UBERON:0007023!4.88e-08!115;UBERON:0003081!6.06e-08!216;UBERON:0004177!6.71e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-17;15!UBERON:0000179;3.28e-17;15!UBERON:0000463;3.28e-17;15!UBERON:0002390;1.29e-12;32!UBERON:0002193;2.46e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.48e-49,98;UBERON:0003061,3.48e-49,98;UBERON:0002193,1.85e-45,108;UBERON:0002405,4.30e-31,93;UBERON:0002371,1.04e-27,76;UBERON:0001474,1.68e-24,82;UBERON:0004765,6.45e-21,90;UBERON:0001434,2.72e-17,100;UBERON:0000178,2.96e-17,15;UBERON:0000179,2.96e-17,15;UBERON:0000463,2.96e-17,15;UBERON:0002384,2.76e-16,371;UBERON:0003081,6.00e-13,203;UBERON:0004177,1.13e-08,7;UBERON:0005057,1.13e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18286014030742,8.7847630711442,7.08397031823113,9.4407426443737,13.4340289334024,5.26374819274658,0,0,0,0,0,1.76160263600908,8.86392653651004,6.41742231904453,6.94434786290726,0.671746422719773,7.77344798445551,3.34848237924443,2.76256653681173,3.02300754951048,2.18325655069035,4.18372266430232,5.75635043230556,3.71647645074124,2.58923153089935,2.56160706529101,4.02019790810595,10.3423704220986,2.5819387343353,2.70852973188684,3.57660445130949,3.547779950752,4.26974620445661,10.1007684482398,9.30694178520671,7.67204550958849,2.30895910130701,2.19410023383795,2.55734850319616,4.93355705668593,6.24123747160254,4.35975574296902,2.76373531782418,3.12889751052121,3.69221035998698,5.44859552370032,12.1531619875896,6.32924774881769,5.0701268714866,6.80333759888139,7.12839394728478,4.4931452458598,3.75442232103766,6.10757229448904,2.56511469367124,6.76316702476906,7.67189445811463,22.879511779972,28.3992077856308,28.4642961236338,28.590924911956,29.6293030406649,32.1861366374511,29.7470192753188,31.483773899667,8.53819453664173,9.98303221930596,8.02773779062981,1.32171328579026,1.12101712596307,1.31692042387539,27.145948275709,23.1876350022007,20.9713528979499,38.452893939856,49.5401845283057,66.2826928028627,54.5514839542152,45.7896977798063,50.3776101781972,54.7188719621544,86.38643254104,25.4901726254094,30.6940060241313,38.4784696772602,35.0964522588027,40.2826289171723,59.0180521385,69.8281561314151,47.0409857122396,49.1762547307437,47.5193412066382,61.8529401868734,77.6770454499874,56.067512921041,63.1550950240726,64.6307390224894,47.1300122713429,53.4984034625469,51.2215978864618,74.3480571418213,65.6902397536837,18.3462136334507,16.5812921385775,17.2341040620531,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0.696518949197069,0.531831842075461,9.06264372360299,8.00792875092179,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,27.1446184903828,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,12.8024298830249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,2.46331618947972,7.48411689112421,3.7319060797339,6.91775776401415,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4852824629903,18.7179222191831,11.4282614675544,15.9145364986888,0,0,0,0,0,7.49007023947182,2.99161459204025,6.21623270154053,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,19.8497305077972,13.8057088523915,16.2225887861235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,18.2681139323581,9.94028369285088,24.494829048489,31.9230579113437,22.6249250197407,14.9148861574325,24.8414461129533,29.345631522888,0,0,0,1.85803175125719,0,19.066014017375,11.3192653637464,2.59453182862662,0.383010740264733,0.423347165447766,0.324621940274555,1.40398589056729,3.87998954356427,0,0,0,0.481764225311099,0.605399121573143,0.425846237690326,1.37402137902306,3.37964840739304,4.47352215784832,4.67177596793344,0.976940477010201,0,0,0,0,0,0,0,0,23.6259974668254,0,0,0,0,0,0,0,3.46088135876195,0,0.19924798825107,7.45966571934099,0,0,3.44637455290994,0,0,0,1.02314474045374,0.295930216910801,21.5534783112246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0.0915975934018623,0,6.13159789174419,4.55242743545572,0.831058409500782,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0.611030144933625,1.77912677208373,4.3247378631276,6.7874267178546,0.067401132980677,1.60515529459758,0,0,0,0,0.394584402849391,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,2.55493176133945,0,1.31443677139657,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,1.17466153824464,0,1.65695622138878,5.45782623993146,22.3301144044677,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,14.9990546891197,2.3472180532711,0,0,0,0,0,0,0,0,0,0.509197589862076,0.212574920101683,1.98297222814403,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0.336283722218824,0.606965604236632,0,0.0887023701626388,5.99216735290052,0,0.067969732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| ||
|short_description=p4@TRAF3IP3 | |short_description=p4@TRAF3IP3 | ||
}} | }} |
Latest revision as of 21:00, 24 September 2015
Short description: | p4@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRAF3IP3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000474496, ENST00000477431, ENST00000487271_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | C9JBA0C9J0C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.48e-49 | 98 |
blood island | 3.48e-49 | 98 |
hemolymphoid system | 1.85e-45 | 108 |
immune system | 4.30e-31 | 93 |
bone marrow | 1.04e-27 | 76 |
bone element | 1.68e-24 | 82 |
skeletal element | 6.45e-21 | 90 |
skeletal system | 2.72e-17 | 100 |
blood | 2.96e-17 | 15 |
haemolymphatic fluid | 2.96e-17 | 15 |
organism substance | 2.96e-17 | 15 |
connective tissue | 2.76e-16 | 371 |
lateral plate mesoderm | 6.00e-13 | 203 |
hemopoietic organ | 1.13e-08 | 7 |
immune organ | 1.13e-08 | 7 |