FFCP PHASE1:Hg19::chr8:101965146..101965236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7534 | |EntrezGene=7534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12855 | |HGNC=12855 | ||
|TSSclassifier=strong | |||
|UniProt=B0AZS6,P63104,D0PNI1 | |UniProt=B0AZS6,P63104,D0PNI1 | ||
|association_with_transcript=0bp_to_ENST00000395948,ENST00000395957,ENST00000457309,NM_001135699,uc010mbr.2_5end | |association_with_transcript=0bp_to_ENST00000395948,ENST00000395957,ENST00000457309,NM_001135699,uc010mbr.2_5end | ||
|cluster_id=chr8:101965146..101965236,- | |||
|coexpression_cluster_id=C4713 | |coexpression_cluster_id=C4713 | ||
|description=CAGE_peak_5_at_YWHAZ_5end | |description=CAGE_peak_5_at_YWHAZ_5end | ||
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|ontology_enrichment_celltype=CL:0000133!5.04e-14!59;CL:0000221!1.22e-13!71;CL:0002319!1.94e-11!25;CL:0000333!3.11e-10!41;CL:0002321!1.94e-08!248;CL:0000220!6.73e-08!246;CL:0000066!1.80e-07!254;CL:0000095!3.16e-07!17;CL:0000123!3.16e-07!17;CL:0000147!6.84e-07!14 | |ontology_enrichment_celltype=CL:0000133!5.04e-14!59;CL:0000221!1.22e-13!71;CL:0002319!1.94e-11!25;CL:0000333!3.11e-10!41;CL:0002321!1.94e-08!248;CL:0000220!6.73e-08!246;CL:0000066!1.80e-07!254;CL:0000095!3.16e-07!17;CL:0000123!3.16e-07!17;CL:0000147!6.84e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.60e-11;25!CL:0000095;2.66e-07;17!CL:0000147;7.08e-07;14 | |ontology_enrichment_celltype_v019=CL:0002319;1.60e-11;25!CL:0000095;2.66e-07;17!CL:0000147;7.08e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.04e-14,59;CL:0000221,4.03e-13,72;CL:0002319,1.94e-11,25;CL:0000333,3.11e-10,41;CL:0002321,4.51e-08,250;CL:0000066,1.10e-07,253;CL:0000095,3.16e-07,17;CL:0000123,3.16e-07,17;CL:0000147,6.84e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000133;4.48e-08;59!CL:0000221;7.05e-07;72!UBERON:0006238;7.58e-07;10 | |ontology_enrichment_development_v019=CL:0000133;4.48e-08;59!CL:0000221;7.05e-07;72!UBERON:0006238;7.58e-07;10 | ||
|ontology_enrichment_disease=DOID:14566!2.01e-07!239;DOID:162!5.29e-07!235;DOID:0050687!7.66e-07!143 | |ontology_enrichment_disease=DOID:14566!2.01e-07!239;DOID:162!5.29e-07!235;DOID:0050687!7.66e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,2.01e-07,239;DOID:162,5.30e-07,235;DOID:0050687,7.67e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.22e-15!173;UBERON:0006601!1.22e-15!173;UBERON:0004121!1.50e-14!169;UBERON:0000073!2.32e-12!94;UBERON:0001016!2.32e-12!94;UBERON:0005743!1.36e-10!86;UBERON:0001017!8.16e-10!82;UBERON:0000033!2.75e-09!123;UBERON:0001869!5.13e-09!32;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0001893!3.24e-08!34;UBERON:0000956!3.26e-08!25;UBERON:0000203!3.26e-08!25;UBERON:0002791!8.54e-08!33;UBERON:0000468!1.07e-07!659;UBERON:0003056!3.33e-07!61;UBERON:0002020!4.62e-07!34;UBERON:0003528!4.62e-07!34;UBERON:0000955!6.73e-07!69;UBERON:0006238!6.73e-07!69 | |ontology_enrichment_uberon=UBERON:0000924!1.22e-15!173;UBERON:0006601!1.22e-15!173;UBERON:0004121!1.50e-14!169;UBERON:0000073!2.32e-12!94;UBERON:0001016!2.32e-12!94;UBERON:0005743!1.36e-10!86;UBERON:0001017!8.16e-10!82;UBERON:0000033!2.75e-09!123;UBERON:0001869!5.13e-09!32;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0001893!3.24e-08!34;UBERON:0000956!3.26e-08!25;UBERON:0000203!3.26e-08!25;UBERON:0002791!8.54e-08!33;UBERON:0000468!1.07e-07!659;UBERON:0003056!3.33e-07!61;UBERON:0002020!4.62e-07!34;UBERON:0003528!4.62e-07!34;UBERON:0000955!6.73e-07!69;UBERON:0006238!6.73e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.71e-08;32!UBERON:0000956;3.03e-08;25!UBERON:0000203;3.03e-08;25!UBERON:0001893;7.79e-08;34!UBERON:0002791;1.27e-07;32!UBERON:0003528;6.03e-07;34!UBERON:0002020;6.03e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.71e-08;32!UBERON:0000956;3.03e-08;25!UBERON:0000203;3.03e-08;25!UBERON:0001893;7.79e-08;34!UBERON:0002791;1.27e-07;32!UBERON:0003528;6.03e-07;34!UBERON:0002020;6.03e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.41e-15,171;UBERON:0000924,4.41e-15,171;UBERON:0006601,4.41e-15,171;UBERON:0001016,4.18e-12,89;UBERON:0001017,2.46e-10,81;UBERON:0001869,5.13e-09,32;UBERON:0001893,3.24e-08,34;UBERON:0000956,3.26e-08,25;UBERON:0000203,3.26e-08,25;UBERON:0002791,6.71e-08,32;UBERON:0000955,2.38e-07,68;UBERON:0006238,2.38e-07,68;UBERON:0003056,2.84e-07,61;UBERON:0003528,4.62e-07,34;UBERON:0002020,4.62e-07,34 | |||
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| ||
|short_description=p5@YWHAZ | |short_description=p5@YWHAZ | ||
}} | }} |
Latest revision as of 20:55, 24 September 2015
Short description: | p5@YWHAZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_YWHAZ_5end |
Coexpression cluster: | C4713_Neural_Macrophage_Neurons_Mast_medulloblastoma_brain_duodenum |
Association with transcript: | 0bp_to_ENST00000395948, ENST00000395957, ENST00000457309, NM_001135699, uc010mbr.2_5end |
EntrezGene: | YWHAZ |
HGNC: | 12855 |
UniProt: | B0AZS6P63104D0PNI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.04e-14 | 59 |
ectodermal cell | 4.03e-13 | 72 |
neural cell | 1.94e-11 | 25 |
migratory neural crest cell | 3.11e-10 | 41 |
embryonic cell | 4.51e-08 | 250 |
epithelial cell | 1.10e-07 | 253 |
neuron associated cell | 3.16e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.16e-07 | 17 |
pigment cell | 6.84e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.41e-15 | 171 |
ectoderm | 4.41e-15 | 171 |
presumptive ectoderm | 4.41e-15 | 171 |
nervous system | 4.18e-12 | 89 |
central nervous system | 2.46e-10 | 81 |
cerebral hemisphere | 5.13e-09 | 32 |
telencephalon | 3.24e-08 | 34 |
cerebral cortex | 3.26e-08 | 25 |
pallium | 3.26e-08 | 25 |
regional part of telencephalon | 6.71e-08 | 32 |
brain | 2.38e-07 | 68 |
future brain | 2.38e-07 | 68 |
pre-chordal neural plate | 2.84e-07 | 61 |
brain grey matter | 4.62e-07 | 34 |
gray matter | 4.62e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.01e-07 | 239 |
cancer | 5.30e-07 | 235 |
cell type cancer | 7.67e-07 | 143 |