FFCP PHASE1:Hg19::chr1:209929494..209929523,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:209929494..209929523,+ to FFCP PHASE1:Hg19::chr1:209929494..209929523,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80342 | |EntrezGene=80342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |HGNC=30766 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000367026,uc001hhl.2,uc001hhm.1,uc001hhn.2,uc001hho.2_5end | |||
|cluster_id=chr1:209929494..209929523,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_5_at_TRAF3IP3_5end | |||
|id=chr1:209929494..209929523,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.41e-78!172;CL:0000566!5.41e-78!172;CL:0000988!5.01e-75!182;CL:0002032!1.39e-72!165;CL:0000837!1.39e-72!165;CL:0000738!2.17e-72!140;CL:0002087!4.29e-62!119;CL:0002031!2.77e-59!124;CL:0000542!2.74e-35!53;CL:0000051!2.74e-35!53;CL:0000763!7.17e-35!112;CL:0000049!7.17e-35!112;CL:0000838!8.50e-35!52;CL:0000766!2.18e-31!76;CL:0002057!1.17e-25!42;CL:0000839!2.60e-25!70;CL:0000557!3.02e-24!71;CL:0002194!1.49e-23!63;CL:0000576!1.49e-23!63;CL:0000040!1.49e-23!63;CL:0000559!1.49e-23!63;CL:0000860!8.27e-23!45;CL:0002009!3.26e-22!65;CL:0000084!2.36e-20!25;CL:0000827!2.36e-20!25;CL:0000791!9.88e-17!18;CL:0000789!9.88e-17!18;CL:0002420!9.88e-17!18;CL:0002419!9.88e-17!18;CL:0000790!9.88e-17!18;CL:0000945!1.67e-13!24;CL:0000826!1.67e-13!24;CL:0000134!2.10e-12!358;CL:0002320!2.23e-11!365;CL:0000625!3.57e-11!11;CL:0000236!2.03e-09!14;CL:0000094!2.07e-08!8;CL:0002393!2.63e-08!9;CL:0002397!2.63e-08!9;CL:0000219!5.86e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.58e-25;25!CL:0000542;1.12e-23;53!CL:0002087;2.10e-22;104!CL:0000860;2.28e-22;33!CL:0002057;2.28e-22;33!CL:0000791;1.40e-21;18!CL:0000789;1.40e-21;18!CL:0002419;1.40e-21;18!CL:0000576;1.33e-19;48!CL:0000473;6.98e-17;39!CL:0000234;6.98e-17;39!CL:0000738;1.37e-15;136!CL:0000766;2.60e-15;69!CL:0000945;3.67e-15;24!CL:0000625;3.10e-14;11!CL:0000988;1.54e-12;177!CL:0000236;2.33e-11;13!CL:0000763;3.64e-11;100!CL:0000094;1.34e-10;8!CL:0000081;9.48e-09;11!CL:0000624;4.59e-08;6!CL:0002393;5.71e-07;6!CL:0002397;5.71e-07;6!CL:0000219;6.48e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.01e-78,168;CL:0000738,1.43e-77,136;CL:0000988,1.59e-77,177;CL:0002087,1.07e-72,115;CL:0002032,4.00e-72,161;CL:0000837,4.00e-72,161;CL:0002031,1.67e-62,120;CL:0000542,1.82e-42,53;CL:0000051,1.82e-42,53;CL:0000838,8.26e-42,52;CL:0000860,1.91e-33,42;CL:0002057,1.91e-33,42;CL:0000766,7.88e-32,72;CL:0000473,2.93e-30,48;CL:0000234,2.93e-30,48;CL:0000763,9.24e-30,108;CL:0000049,9.24e-30,108;CL:0002194,4.42e-26,59;CL:0000576,4.42e-26,59;CL:0000040,4.42e-26,59;CL:0000559,4.42e-26,59;CL:0000084,4.28e-25,25;CL:0000827,4.28e-25,25;CL:0002009,9.68e-25,61;CL:0000557,1.58e-23,67;CL:0000839,8.80e-23,66;CL:0000791,1.29e-21,18;CL:0000789,1.29e-21,18;CL:0002420,1.29e-21,18;CL:0002419,1.29e-21,18;CL:0000790,1.29e-21,18;CL:0000134,7.87e-18,354;CL:0002320,8.21e-17,361;CL:0000945,3.51e-15,24;CL:0000826,3.51e-15,24;CL:0000625,2.90e-14,11;CL:0000219,2.69e-13,386;CL:0000236,3.73e-12,14;CL:0000094,1.29e-10,8;CL:0002393,1.77e-10,9;CL:0002397,1.77e-10,9;CL:0000048,3.33e-09,427;CL:0000034,4.17e-09,441;CL:0000081,9.45e-09,11;CL:0000723,1.15e-08,433;CL:0000624,4.51e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.18e-24;42!CL:0000051;1.12e-23;53!CL:0000790;1.40e-21;18!CL:0000049;1.11e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!3.47e-11!51;DOID:0060083!3.47e-11!51;DOID:1240!1.77e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.30e-09,51;DOID:0060083,3.30e-09,51;DOID:1240,1.92e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.98e-36!102;UBERON:0003061!3.98e-36!102;UBERON:0002193!2.03e-32!112;UBERON:0002371!4.38e-21!80;UBERON:0001474!4.03e-18!86;UBERON:0002405!3.49e-16!115;UBERON:0007023!3.23e-14!115;UBERON:0000178!4.97e-13!15;UBERON:0000179!4.97e-13!15;UBERON:0000463!4.97e-13!15;UBERON:0004765!5.82e-13!101;UBERON:0001434!5.82e-13!101;UBERON:0002384!2.79e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-16;15!UBERON:0000179;1.08e-16;15!UBERON:0000463;1.08e-16;15!UBERON:0002390;7.02e-13;32!UBERON:0002193;2.29e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.19e-40,98;UBERON:0003061,9.19e-40,98;UBERON:0002193,1.51e-36,108;UBERON:0002405,1.07e-23,93;UBERON:0002371,4.86e-21,76;UBERON:0001474,2.20e-18,82;UBERON:0000178,1.02e-16,15;UBERON:0000179,1.02e-16,15;UBERON:0000463,1.02e-16,15;UBERON:0004765,1.94e-15,90;UBERON:0002384,1.95e-15,371;UBERON:0001434,1.75e-12,100;UBERON:0003081,1.09e-09,203;UBERON:0004177,1.86e-07,7;UBERON:0005057,1.86e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19611159086069,3.9408282935974,5.74588703589859,10.6208354749204,12.2825407391108,6.81190942590734,0,0,0,0.697204805222715,1.56386155736164,6.75281010470149,6.64794490238253,5.01361118675354,6.51032612147556,0.671746422719773,4.53451132426571,0.515151135268373,4.65274364094607,2.64513160582167,7.5201058968223,3.71886459049095,2.05583944010913,6.81354015969228,2.58923153089935,3.84241059793651,3.78371567821736,7.92915065694223,9.03678557017357,5.41705946377367,7.34145124216158,4.36649840092553,4.71919317334678,9.18251677112708,5.77672248736969,9.59005688698562,3.62836430205388,3.78980949481101,3.83602275479425,3.48251086354301,2.26954089876456,2.4912889959823,3.51748131359441,3.65038042894141,5.64690996233303,1.21079900526674,4.05105399586321,3.79754864929061,27.0406766479285,19.559595596784,17.4016675771952,15.8383369916558,11.863974534479,13.3402236958577,34.2015292489498,34.8104185098408,32.8795476776341,21.1195493353587,25.122376118058,22.2377313465889,19.2028600154928,19.2190073777286,24.1396024780883,13.8819423284821,20.0351288452426,8.53819453664173,7.6340834618222,6.88091810625412,6.60856642895129,3.36305137788922,5.53106578027662,17.3104597700173,12.1833336452241,17.0649244169593,37.6169614629026,30.9626153301911,26.9865249268798,33.1205438293449,36.3198089445666,35.9419207119301,33.4516180821268,46.3074607038177,28.3081816593742,30.1737686338918,21.7058034076852,27.358651760799,37.3845980598218,29.50902606925,24.8812970123433,29.2699466653935,32.0665439834112,32.9569624497652,30.2392152024714,29.8563236583013,34.7236301613265,40.3671741390979,41.8198899557285,31.7713501254101,37.7560502905534,41.2271397622741,46.8818959047153,37.7718878583681,14.5156855121807,9.89528724398977,15.2065624076939,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0.649094787309367,0.696518949197069,0.797747763113191,2.38490624305342,2.85997455390064,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.695550646293,93.0672633955981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,9.27072508770766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0.985326475791887,1.14462964217194,0.414656231081544,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,10.423918391398,16.156522336558,12.7220269167115,13.4760188093736,0,0,0,0,0,59.9205619157746,59.832291840805,55.5316788004288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1279060375852,12.0799952458425,15.4754958814994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,24.8649328523763,25.9976650428408,30.7609481074048,30.493667258597,25.0930986582578,29.829772314865,25.3814775501914,26.9662559940052,0,0,0,3.71606350251437,0,4.62421981764692,5.42049327277996,6.18696051441731,3.4470966623826,5.71518673354484,2.59697552219644,4.21195767170188,4.33645890163065,0.94007937463814,5.01268954180134,4.74016977844489,0.642352300414798,4.43959355820305,2.98092366383228,9.27464430840565,1.22896305723383,0.447352215784832,1.16794399198336,6.83858333907141,0,0,0,1.6653598399891,0,0,0.146508179271894,0,8.91547074219827,0,0,0.296964680832639,0,0,0.562677665642051,0,0.16480387422676,0,0,10.2225048746525,0,0,2.58478091468246,0,0,0,1.02314474045374,0.394573622547734,16.7638164642858,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,21.4605926211047,0.470940769185074,0.332423363800313,0,0,0,0,0.953619473882272,0,0,0,0,0.995261931078505,1.32686346755009,1.22206028986725,5.33738031625119,9.88511511572023,9.92008520301826,0.606610196826093,0.802577647298789,0.234264445725339,1.094728735294,0,0,0.394584402849391,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0.189932387867636,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,7.66479528401834,0,4.20619766846903,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,0,0,0,0,0,5.41909325221021,0,0.544813624446302,0,0,0,0,0,0.485996453264197,0,0.394028536495991,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.79339561045614,0,0,1.38823636338003,0.943225830597996,3.31391244277756,8.93098839261511,18.7731050303047,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0,0.625954653532499,0,1.10929051536852,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.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| ||
|short_description=p5@TRAF3IP3 | |||
}} | }} |
Latest revision as of 20:50, 24 September 2015
Short description: | p5@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAF3IP3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000367026, uc001hhl.2, uc001hhm.1, uc001hhn.2, uc001hho.2_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.19e-40 | 98 |
blood island | 9.19e-40 | 98 |
hemolymphoid system | 1.51e-36 | 108 |
immune system | 1.07e-23 | 93 |
bone marrow | 4.86e-21 | 76 |
bone element | 2.20e-18 | 82 |
blood | 1.02e-16 | 15 |
haemolymphatic fluid | 1.02e-16 | 15 |
organism substance | 1.02e-16 | 15 |
skeletal element | 1.94e-15 | 90 |
connective tissue | 1.95e-15 | 371 |
skeletal system | 1.75e-12 | 100 |
lateral plate mesoderm | 1.09e-09 | 203 |
hemopoietic organ | 1.86e-07 | 7 |
immune organ | 1.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.30e-09 | 51 |
immune system cancer | 3.30e-09 | 51 |
leukemia | 1.92e-07 | 39 |