FFCP PHASE1:Hg19::chr17:42392549..42392560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10900 | |EntrezGene=10900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16984 | |HGNC=16984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-323bp_to_BC013240_5end | |association_with_transcript=-323bp_to_BC013240_5end | ||
|cluster_id=chr17:42392549..42392560,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_5_at_RUNDC3A_5end | |description=CAGE_peak_5_at_RUNDC3A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002149!8.40e-07!6;CL:0002255!8.40e-07!6 | |ontology_enrichment_celltype=CL:0002149!8.40e-07!6;CL:0002255!8.40e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | |ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3001!8.40e-07!6 | |ontology_enrichment_disease=DOID:3001!8.40e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.32e-19!115;UBERON:0001869!1.32e-11!32;UBERON:0002619!1.70e-11!22;UBERON:0001049!1.85e-11!57;UBERON:0005068!1.85e-11!57;UBERON:0006241!1.85e-11!57;UBERON:0007135!1.85e-11!57;UBERON:0001017!3.72e-11!82;UBERON:0002616!6.65e-11!59;UBERON:0002020!7.60e-11!34;UBERON:0003528!7.60e-11!34;UBERON:0001950!9.72e-11!20;UBERON:0001893!9.72e-11!34;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0005743!2.35e-10!86;UBERON:0000178!2.71e-10!15;UBERON:0000179!2.71e-10!15;UBERON:0000463!2.71e-10!15;UBERON:0001871!7.27e-10!7;UBERON:0000956!7.37e-10!25;UBERON:0000203!7.37e-10!25;UBERON:0000073!9.93e-10!94;UBERON:0001016!9.93e-10!94;UBERON:0002780!1.25e-09!41;UBERON:0001890!1.25e-09!41;UBERON:0006240!1.25e-09!41;UBERON:0002791!1.32e-09!33;UBERON:0003080!2.56e-09!42;UBERON:0000200!3.05e-09!6;UBERON:0000349!1.52e-07!5;UBERON:0002771!1.82e-07!3;UBERON:0003075!9.83e-07!86;UBERON:0007284!9.83e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.32e-19!115;UBERON:0001869!1.32e-11!32;UBERON:0002619!1.70e-11!22;UBERON:0001049!1.85e-11!57;UBERON:0005068!1.85e-11!57;UBERON:0006241!1.85e-11!57;UBERON:0007135!1.85e-11!57;UBERON:0001017!3.72e-11!82;UBERON:0002616!6.65e-11!59;UBERON:0002020!7.60e-11!34;UBERON:0003528!7.60e-11!34;UBERON:0001950!9.72e-11!20;UBERON:0001893!9.72e-11!34;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0005743!2.35e-10!86;UBERON:0000178!2.71e-10!15;UBERON:0000179!2.71e-10!15;UBERON:0000463!2.71e-10!15;UBERON:0001871!7.27e-10!7;UBERON:0000956!7.37e-10!25;UBERON:0000203!7.37e-10!25;UBERON:0000073!9.93e-10!94;UBERON:0001016!9.93e-10!94;UBERON:0002780!1.25e-09!41;UBERON:0001890!1.25e-09!41;UBERON:0006240!1.25e-09!41;UBERON:0002791!1.32e-09!33;UBERON:0003080!2.56e-09!42;UBERON:0000200!3.05e-09!6;UBERON:0000349!1.52e-07!5;UBERON:0002771!1.82e-07!3;UBERON:0003075!9.83e-07!86;UBERON:0007284!9.83e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.65e-58;15!UBERON:0000179;3.65e-58;15!UBERON:0000463;3.65e-58;15!UBERON:0002390;1.21e-24;32!UBERON:0002193;1.53e-16;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.65e-58;15!UBERON:0000179;3.65e-58;15!UBERON:0000463;3.65e-58;15!UBERON:0002390;1.21e-24;32!UBERON:0002193;1.53e-16;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-58,15;UBERON:0000179,3.35e-58,15;UBERON:0000463,3.35e-58,15;UBERON:0007023,2.60e-12,114;UBERON:0002390,1.31e-08,98;UBERON:0003061,1.31e-08,98;UBERON:0004535,8.78e-08,109;UBERON:0002193,8.78e-08,108;UBERON:0001009,1.46e-07,112 | |||
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| ||
|short_description=p5@RUNDC3A | |short_description=p5@RUNDC3A | ||
}} | }} |
Latest revision as of 20:47, 24 September 2015
Short description: | p5@RUNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RUNDC3A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -323bp_to_BC013240_5end |
EntrezGene: | RUNDC3A |
HGNC: | 16984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.30e-37 | 2 |
erythroblast | 1.30e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-37 | 2 |
erythroid progenitor cell | 1.30e-37 | 2 |
reticulocyte | 1.30e-37 | 2 |
proerythroblast | 1.30e-37 | 2 |
basophilic erythroblast | 1.30e-37 | 2 |
polychromatophilic erythroblast | 1.30e-37 | 2 |
orthochromatic erythroblast | 1.30e-37 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-58 | 15 |
haemolymphatic fluid | 3.35e-58 | 15 |
organism substance | 3.35e-58 | 15 |
adult organism | 2.60e-12 | 114 |
hematopoietic system | 1.31e-08 | 98 |
blood island | 1.31e-08 | 98 |
cardiovascular system | 8.78e-08 | 109 |
hemolymphoid system | 8.78e-08 | 108 |
circulatory system | 1.46e-07 | 112 |