FFCP PHASE1:Hg19::chr1:209929388..209929412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80342 | |EntrezGene=80342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |HGNC=30766 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y228 | |UniProt=Q9Y228 | ||
|association_with_transcript=0bp_to_ENST00000367025,ENST00000478359,NM_025228_5end | |association_with_transcript=0bp_to_ENST00000367025,ENST00000478359,NM_025228_5end | ||
|cluster_id=chr1:209929388..209929412,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_TRAF3IP3_5end | |description=CAGE_peak_3_at_TRAF3IP3_5end | ||
|id=chr1:209929388..209929412,+ | |id=chr1:209929388..209929412,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.88e-82!172;CL:0000566!2.88e-82!172;CL:0000988!2.23e-79!182;CL:0002032!2.47e-77!165;CL:0000837!2.47e-77!165;CL:0000738!4.23e-75!140;CL:0002031!5.06e-64!124;CL:0002087!1.30e-63!119;CL:0000763!5.84e-40!112;CL:0000049!5.84e-40!112;CL:0000766!2.10e-35!76;CL:0000542!1.17e-33!53;CL:0000051!1.17e-33!53;CL:0000838!3.29e-33!52;CL:0000839!1.29e-29!70;CL:0000557!7.42e-29!71;CL:0002057!2.62e-27!42;CL:0002194!3.97e-26!63;CL:0000576!3.97e-26!63;CL:0000040!3.97e-26!63;CL:0000559!3.97e-26!63;CL:0002009!1.44e-25!65;CL:0000860!2.80e-24!45;CL:0000084!7.61e-20!25;CL:0000827!7.61e-20!25;CL:0000791!1.60e-15!18;CL:0000789!1.60e-15!18;CL:0002420!1.60e-15!18;CL:0002419!1.60e-15!18;CL:0000790!1.60e-15!18;CL:0000945!7.40e-13!24;CL:0000826!7.40e-13!24;CL:0000134!2.18e-12!358;CL:0002320!2.42e-11!365;CL:0000625!2.15e-10!11;CL:0000236!3.69e-08!14;CL:0000094!5.45e-08!8;CL:0000219!7.21e-08!390;CL:0002393!8.58e-08!9;CL:0002397!8.58e-08!9 | |ontology_enrichment_celltype=CL:0000037!2.88e-82!172;CL:0000566!2.88e-82!172;CL:0000988!2.23e-79!182;CL:0002032!2.47e-77!165;CL:0000837!2.47e-77!165;CL:0000738!4.23e-75!140;CL:0002031!5.06e-64!124;CL:0002087!1.30e-63!119;CL:0000763!5.84e-40!112;CL:0000049!5.84e-40!112;CL:0000766!2.10e-35!76;CL:0000542!1.17e-33!53;CL:0000051!1.17e-33!53;CL:0000838!3.29e-33!52;CL:0000839!1.29e-29!70;CL:0000557!7.42e-29!71;CL:0002057!2.62e-27!42;CL:0002194!3.97e-26!63;CL:0000576!3.97e-26!63;CL:0000040!3.97e-26!63;CL:0000559!3.97e-26!63;CL:0002009!1.44e-25!65;CL:0000860!2.80e-24!45;CL:0000084!7.61e-20!25;CL:0000827!7.61e-20!25;CL:0000791!1.60e-15!18;CL:0000789!1.60e-15!18;CL:0002420!1.60e-15!18;CL:0002419!1.60e-15!18;CL:0000790!1.60e-15!18;CL:0000945!7.40e-13!24;CL:0000826!7.40e-13!24;CL:0000134!2.18e-12!358;CL:0002320!2.42e-11!365;CL:0000625!2.15e-10!11;CL:0000236!3.69e-08!14;CL:0000094!5.45e-08!8;CL:0000219!7.21e-08!390;CL:0002393!8.58e-08!9;CL:0002397!8.58e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.79e-25;25!CL:0000860;7.08e-24;33!CL:0002057;7.08e-24;33!CL:0000542;1.51e-23;53!CL:0002087;4.54e-22;104!CL:0000473;2.39e-21;39!CL:0000234;2.39e-21;39!CL:0000576;7.93e-21;48!CL:0000766;2.37e-19;69!CL:0000791;2.72e-19;18!CL:0000789;2.72e-19;18!CL:0002419;2.72e-19;18!CL:0000738;3.12e-19;136!CL:0000945;6.01e-15;24!CL:0000988;1.07e-14;177!CL:0000763;3.39e-14;100!CL:0000625;8.72e-13;11!CL:0000094;1.09e-09;8!CL:0000236;1.91e-09;13!CL:0000219;4.04e-08;193!CL:0000081;4.34e-08;11!CL:0000624;3.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.84e-97,168;CL:0000988,1.58e-95,177;CL:0000738,5.16e-93,136;CL:0002032,6.89e-91,161;CL:0000837,6.89e-91,161;CL:0002087,1.37e-80,115;CL:0002031,1.07e-78,120;CL:0000766,8.77e-46,72;CL:0000763,2.07e-45,108;CL:0000049,2.07e-45,108;CL:0000542,3.84e-41,53;CL:0000051,3.84e-41,53;CL:0000838,1.44e-40,52;CL:0000839,3.89e-37,66;CL:0000557,2.57e-36,67;CL:0000473,3.27e-35,48;CL:0000234,3.27e-35,48;CL:0000860,2.74e-34,42;CL:0002057,2.74e-34,42;CL:0002194,8.20e-34,59;CL:0000576,8.20e-34,59;CL:0000040,8.20e-34,59;CL:0000559,8.20e-34,59;CL:0002009,4.08e-32,61;CL:0000084,8.64e-25,25;CL:0000827,8.64e-25,25;CL:0000134,9.43e-23,354;CL:0002320,1.61e-21,361;CL:0000791,2.73e-19,18;CL:0000789,2.73e-19,18;CL:0002420,2.73e-19,18;CL:0002419,2.73e-19,18;CL:0000790,2.73e-19,18;CL:0000219,3.01e-17,386;CL:0000945,7.61e-15,24;CL:0000826,7.61e-15,24;CL:0000625,8.89e-13,11;CL:0000048,3.17e-12,427;CL:0000034,6.58e-12,441;CL:0000723,1.48e-11,433;CL:0000236,4.13e-10,14;CL:0000094,9.96e-10,8;CL:0002393,1.77e-09,9;CL:0002397,1.77e-09,9;CL:0000081,4.03e-08,11;CL:0000624,3.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-24;42!CL:0000051;1.51e-23;53!CL:0000790;2.72e-19;18!CL:0000049;2.06e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!8.53e-13!51;DOID:0060083!8.53e-13!51;DOID:1240!1.71e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.25e-07;51!DOID:0060083;5.25e-07;51!DOID:0060058;9.22e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.43e-11,51;DOID:0060083,6.43e-11,51;DOID:1240,1.45e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-40!102;UBERON:0003061!1.84e-40!102;UBERON:0002193!9.19e-37!112;UBERON:0002371!5.33e-25!80;UBERON:0001474!1.40e-21!86;UBERON:0002405!4.31e-19!115;UBERON:0004765!1.20e-15!101;UBERON:0001434!1.20e-15!101;UBERON:0007023!3.37e-15!115;UBERON:0000178!5.22e-13!15;UBERON:0000179!5.22e-13!15;UBERON:0000463!5.22e-13!15;UBERON:0002384!1.51e-10!375;UBERON:0003081!1.98e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.37e-16;15!UBERON:0000179;4.37e-16;15!UBERON:0000463;4.37e-16;15!UBERON:0002390;9.52e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.19e-52,98;UBERON:0003061,4.19e-52,98;UBERON:0002193,2.80e-47,108;UBERON:0002405,2.18e-33,93;UBERON:0002371,3.77e-32,76;UBERON:0001474,2.51e-28,82;UBERON:0004765,4.62e-24,90;UBERON:0002384,7.49e-20,371;UBERON:0001434,9.35e-20,100;UBERON:0000178,4.26e-16,15;UBERON:0000179,4.26e-16,15;UBERON:0000463,4.26e-16,15;UBERON:0003081,7.23e-13,203;UBERON:0004177,8.07e-07,7;UBERON:0005057,8.07e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3025583254202,14.2855025642906,14.5614945430307,12.9810211360138,14.9693465257913,7.58599004248772,0,0,0,1.08454080812422,2.41687695228617,3.22960483268332,14.9578760303607,11.8321224007384,10.8505435357926,1.56740831967947,5.83008598834163,3.09090681161024,9.59628375945127,6.80176698639857,9.94594650870046,13.4808841405297,9.45686142450199,12.078548464909,5.75384784644301,8.96562472851852,10.1687358852092,18.2715210790408,16.1371170895957,12.1883837934908,17.5065375774622,9.00590295190891,12.8092386133698,17.7528657575123,18.2929545433373,17.9014395223732,4.94776950280074,9.3747919082167,10.6556187633174,8.41606792022894,5.6738522469114,6.85104473895132,8.79370328398601,9.38669253156363,10.6422533905507,6.65939452896706,10.3117738076518,8.54448446090388,23.4493367806255,16.1579267973433,22.0141577783795,28.5314723112098,24.1784797474825,22.9837588976825,20.5209175493699,18.1014176251172,19.9103927603451,21.1195493353587,17.4764355603882,20.4587128388618,13.2286368995617,14.4142555332964,14.3688109988621,15.8650769468367,15.2648600725658,5.12291672198504,4.11066032559657,4.96955196562797,3.96513985737078,2.80254281490768,6.32121803460185,16.523620689562,10.6112905942274,14.3921049299656,58.3480868913467,43.9995059955347,38.8227200702481,40.9136129656614,65.8435800191376,41.8340388614269,32.7870163983759,49.2863032052328,38.2993045979769,47.4716618593556,44.2337963383889,37.8599524366612,66.075103547592,41.3719511222149,43.6091549786232,45.9956304741898,48.9496360453486,27.5918755393383,37.111764112124,39.2180522630229,37.9092843045675,45.5758417699493,44.6712460890736,37.794354888521,44.0273942371199,41.2271397622741,36.9372513188666,29.5606078891577,15.9269327147539,12.5696892018248,13.0341963494519,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.0478326039817,0,0,1.9472843619281,1.74129737299267,4.38761269712255,1.43094374583205,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,172.632346841243,166.74551358378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9560811695618,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.23108503043699,2.80805118167085,2.0808362720422,0,0,0,0,0,0,4.43396914106349,24.2133193536372,8.9151089682532,10.5207565994382,7.70078843900918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,16.364431023055,15.1713685355484,11.4282614675544,10.0107568298204,0,0,0,0,0,72.6536813228767,41.8826042885635,50.5586926391963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8835706384116,14.4528514548473,15.6889509971063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,0.522870902049801,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,26.894723289305,30.585488285695,21.6465931126182,29.7789719322236,22.2135627466545,40.8538186051412,28.6216661736201,23.0006301125338,0,0,0,4.64507937814297,0,21.0579856311306,9.08729754554287,8.58191297161111,3.63860203251497,7.4085753953359,2.27235358192189,2.24637742490767,4.10822422259746,0.626719583092093,20.0507581672054,5.92521222305612,2.72999727676289,4.237793851012,5.96184732766457,5.49608551609224,0.921722292925374,0.671028323677248,0.500547425135725,10.7463452471122,0.278406173895242,0,0,1.99843180798692,0,0,0.73254089635947,0,30.0897137549192,0,0,0,0,0,0.984685914873589,0,1.15362711958732,0,0.398495976502139,9.11736921252787,0,0,5.6619010512092,0,0,0,6.65044081294933,0.493217028184668,19.1586473877552,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,13.2851287654457,0.784901281975124,3.65665700180344,0,0,0,0,5.56278026431325,0,0,0,0,1.99052386215701,0.884575645033392,2.4441205797345,14.5295353053505,29.9024732250537,27.0452849219129,1.21322039365219,0.802577647298789,0.468528891450678,3.10173141666632,0,0,0,3.62972148145992,0.61214552326098,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,2.55493176133945,0,6.83507121126218,1.39641200636127,0.458320848023367,0,0.399358000997982,0,0.669514372325618,0.470284307407084,0,0,0,0,0,0,20.7449663561172,0.795229689809303,1.0896272488926,0,0,0,0.449947783103001,0,0.425246896606173,0,0.551639951094387,0.262272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0.226624183040251,0.439656701034247,1.32506888912221,0.258565912723101,0.92562821219883,0,0,2.24253566392159,0.628817220398664,3.31391244277756,3.47316215268366,36.9533751649156,0.730755590285376,0,0,0,0,0,0,0,0,0.625954653532499,0,1.33114861844223,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803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| ||
|short_description=p3@TRAF3IP3 | |short_description=p3@TRAF3IP3 | ||
}} | }} |
Latest revision as of 20:45, 24 September 2015
Short description: | p3@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAF3IP3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000367025, ENST00000478359, NM_025228_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | Q9Y228 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.19e-52 | 98 |
blood island | 4.19e-52 | 98 |
hemolymphoid system | 2.80e-47 | 108 |
immune system | 2.18e-33 | 93 |
bone marrow | 3.77e-32 | 76 |
bone element | 2.51e-28 | 82 |
skeletal element | 4.62e-24 | 90 |
connective tissue | 7.49e-20 | 371 |
skeletal system | 9.35e-20 | 100 |
blood | 4.26e-16 | 15 |
haemolymphatic fluid | 4.26e-16 | 15 |
organism substance | 4.26e-16 | 15 |
lateral plate mesoderm | 7.23e-13 | 203 |
hemopoietic organ | 8.07e-07 | 7 |
immune organ | 8.07e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.43e-11 | 51 |
immune system cancer | 6.43e-11 | 51 |
leukemia | 1.45e-07 | 39 |